Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8TJI
DownloadVisualize
BU of 8tji by Molmil
SAM-dependent methyltransferase RedM, apo
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, RedM, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
8TJJ
DownloadVisualize
BU of 8tjj by Molmil
SAM-dependent methyltransferase RedM bound to SAM
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, RedM, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
8TJK
DownloadVisualize
BU of 8tjk by Molmil
SAM-dependent methyltransferase RedM bound to SAH
分子名称: CHLORIDE ION, RedM, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
4IXM
DownloadVisualize
BU of 4ixm by Molmil
Crystal structure of Zn(II)-bound YjiA GTPase from E. coli
分子名称: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
著者Jost, M, Ryan, K.S, Turo, K.E, Drennan, C.L.
登録日2013-01-26
公開日2013-02-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
8U06
DownloadVisualize
BU of 8u06 by Molmil
Imine reductase RedE bound with NADP+ and arcyriaflavin A (primary site)
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Arcyriaflavin A, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-08-28
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An imine reductase that captures reactive intermediates in the biosynthesis of the indolocarbazole reductasporine
To be published
8U05
DownloadVisualize
BU of 8u05 by Molmil
Reductasporine biosynthetic pathway imine reductase RedE bound with NADP+
分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-08-28
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献An imine reductase that captures reactive intermediates in the biosynthesis of the indolocarbazole reductasporine
To be published
8U07
DownloadVisualize
BU of 8u07 by Molmil
Imine reductase RedE bound with NADP+ and arcyriaflavin A (secondary site)
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Arcyriaflavin A, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-08-28
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献An imine reductase that captures reactive intermediates in the biosynthesis of the indolocarbazole reductasporine
To be published
7LR2
DownloadVisualize
BU of 7lr2 by Molmil
Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813 in complex with GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl hydrolase BlGH5_18, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR7
DownloadVisualize
BU of 7lr7 by Molmil
Crystal structure of GH5_18 from Streptomyces cattleya in complex with GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR6
DownloadVisualize
BU of 7lr6 by Molmil
Crystal structure of GH5_18-E140A from Bifidobacterium longum subsp. longum ATCC 55813 in complex with Manb1-4GlcNAc
分子名称: Glycosyl hydrolase BlGH5_18, PHOSPHATE ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LQX
DownloadVisualize
BU of 7lqx by Molmil
Crystal structure of a GH5_18 from Bifidobacterium longum subsp. infantis
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase BlGH5_18, SULFATE ION
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2021-04-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR1
DownloadVisualize
BU of 7lr1 by Molmil
Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase BlGH5_18, PHOSPHATE ION
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR8
DownloadVisualize
BU of 7lr8 by Molmil
Crystal structure of GH5_18-E153A from Streptomyces cattleya in complex with Manb1-4GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, SULFATE ION, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7JQ2
DownloadVisualize
BU of 7jq2 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI5
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-L-valyl-3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JPY
DownloadVisualize
BU of 7jpy by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
分子名称: 3C-like proteinase
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JQ4
DownloadVisualize
BU of 7jq4 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI7
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-phenylalaninamide
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JQ0
DownloadVisualize
BU of 7jq0 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI3
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JPZ
DownloadVisualize
BU of 7jpz by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI1
分子名称: (phenylmethyl) N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate, 3C-like proteinase
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JQ5
DownloadVisualize
BU of 7jq5 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI8
分子名称: 3C-like proteinase, N-[(BENZYLOXY)CARBONYL]-O-(TERT-BUTYL)-L-THREONYL-3-CYCLOHEXYL-N-[(1S)-2-HYDROXY-1-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}ETHYL]-L-ALANINAMIDE
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JQ3
DownloadVisualize
BU of 7jq3 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI6
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
7JQ1
DownloadVisualize
BU of 7jq1 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI4
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3R)-2-oxo-3,4-dihydro-2H-pyrrol-3-yl]propan-2-yl}-L-phenylalaninamide
著者Yang, K, Liu, W.
登録日2020-08-10
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Quick Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors*.
Chemmedchem, 16, 2021
5UN5
DownloadVisualize
BU of 5un5 by Molmil
Frizzled-8 complex with designed surrogate Wnt agonist, crystal form 1
分子名称: Designed Wnt agonist B12, Frizzled-8
著者Janda, C.Y, Garcia, K.C.
登録日2017-01-30
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.994 Å)
主引用文献Surrogate Wnt agonists that phenocopy canonical Wnt and beta-catenin signalling.
Nature, 545, 2017
5UN6
DownloadVisualize
BU of 5un6 by Molmil
Frizzled-8 complex with designed surrogate Wnt agonist, A1 dataset
分子名称: Designed Wnt agonist B12, Frizzled-8
著者Janda, C.Y, Garcia, K.C, Jude, K.M.
登録日2017-01-30
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Surrogate Wnt agonists that phenocopy canonical Wnt and beta-catenin signalling.
Nature, 545, 2017
4ZBL
DownloadVisualize
BU of 4zbl by Molmil
Phototoxic fluorescent protein mKillerOrange
分子名称: CITRIC ACID, GLYCEROL, KillerOrange
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2015-04-14
公開日2015-12-23
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
7M2P
DownloadVisualize
BU of 7m2p by Molmil
Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18
分子名称: 3C-like proteinase, Inhibitor 18 in bound form
著者Yang, K, Li, L.
登録日2021-03-17
公開日2021-08-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Self-Masked Aldehyde Inhibitors: A Novel Strategy for Inhibiting Cysteine Proteases.
J.Med.Chem., 64, 2021

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon