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6ZGG
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BU of 6zgg by Molmil
Furin Cleaved Spike Protein of SARS-CoV-2 with One RBD Erect
分子名称: Spike glycoprotein
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-06-18
公開日2020-07-01
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献SARS-CoV-2 and bat RaTG13 spike glycoprotein structures inform on virus evolution and furin-cleavage effects.
Nat.Struct.Mol.Biol., 27, 2020
6QKQ
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BU of 6qkq by Molmil
NMR solution structure of LSR2-T112D binding domain.
分子名称: Nucleoid-associated protein Lsr2
著者Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V.
登録日2019-01-30
公開日2019-07-17
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112.
Mol.Microbiol., 112, 2019
6QKP
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NMR solution structure of LSR2 binding domain.
分子名称: Nucleoid-associated protein Lsr2
著者Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V.
登録日2019-01-30
公開日2019-07-17
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112.
Mol.Microbiol., 112, 2019
3K4T
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BU of 3k4t by Molmil
Crystal structure of the virion-associated protein P3 from caulimovirus
分子名称: CHLORIDE ION, Virion-associated protein
著者Dumas, C, Hoh, F.
登録日2009-10-06
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structural insights into the molecular mechanisms of cauliflower mosaic virus transmission by its insect vector.
J.Virol., 84, 2010
7NT9
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BU of 7nt9 by Molmil
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Rosa, A, Pye, V.E, Nans, A, Cherepanov, P.
登録日2021-03-09
公開日2021-04-28
最終更新日2021-06-09
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity.
Sci Adv, 7, 2021
7NTA
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Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Rosa, A, Pye, V.E, Nans, A, Cherepanov, P.
登録日2021-03-09
公開日2021-04-28
最終更新日2021-06-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity.
Sci Adv, 7, 2021
7NTC
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Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Rosa, A, Pye, V.E, Nans, A, Cherepanov, P.
登録日2021-03-09
公開日2021-04-28
最終更新日2021-06-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity.
Sci Adv, 7, 2021
8CMX
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BU of 8cmx by Molmil
Structure of sphingosine-1-phosphate lyase (SPL) from Aspergillus fumigatus
分子名称: Sphinganine-1-phosphate aldolase BST1, putative
著者Catalano, F, Pampalone, G.
登録日2023-02-21
公開日2024-01-03
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
3F6N
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BU of 3f6n by Molmil
Crystal structure of the virion-associated protein P3 from Caulimovirus
分子名称: Virion-associated protein
著者Hoh, F, Uzest, M, Blanc, S, Dumas, C.
登録日2008-11-06
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural insights into the molecular mechanisms of cauliflower mosaic virus transmission by its insect vector.
J.Virol., 84, 2010
3NS7
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BU of 3ns7 by Molmil
Succinic Acid Amides as P2-P3 Replacements for Inhibitors of Interleukin-1beta Converting Enzyme (ICE or Caspase 1)
分子名称: (3S)-4-hydroxy-3-{[(2S)-4-{[2-(2-methyl-1H-benzimidazol-1-yl)ethyl]amino}-2-(1-methylethyl)-4-oxobutanoyl]amino}butanoic acid, Caspase-1
著者Galatsis, P.
登録日2010-07-01
公開日2011-08-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Succinic acid amides as P2-P3 replacements for inhibitors of interleukin-1beta converting enzyme (ICE or caspase 1).
Bioorg.Med.Chem.Lett., 20, 2010
7NS7
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BU of 7ns7 by Molmil
Human L-alanine:glyoxylate aminotransferase minor allele variant: AGXT-Mi (P11L-I340M)
分子名称: L-alanine:glyoxylate aminotransferase
著者Cellini, B, Dindo, M.
登録日2021-03-05
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural dynamics shape the fitness window of alanine:glyoxylate aminotransferase.
Protein Sci., 31, 2022
7A93
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SARS-CoV-2 Spike Glycoprotein with 2 RBDs Erect
分子名称: Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7ZVM
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BU of 7zvm by Molmil
Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A
分子名称: MAGNESIUM ION, Mannose-6-phosphate isomerase
著者Hoh, F, Calio, A.
登録日2022-05-16
公開日2022-08-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Unravelling the Adaptation Mechanisms to High Pressure in Proteins.
Int J Mol Sci, 23, 2022
7ZVY
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BU of 7zvy by Molmil
Thermococcus kadokarensis phosphomannose isomerase
分子名称: Cupin_2 domain-containing protein, ZINC ION
著者Hoh, f, Calio, A.
登録日2022-05-17
公開日2022-08-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Unravelling the Adaptation Mechanisms to High Pressure in Proteins.
Int J Mol Sci, 23, 2022
7A98
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BU of 7a98 by Molmil
SARS-CoV-2 Spike Glycoprotein with 3 ACE2 Bound
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-23
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7A5R
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BU of 7a5r by Molmil
Complex of SARS-CoV-2 spike and CR3022 Fab (Non-Uniform Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 Fab Heavy Chain, CR3022 Fab Light Chain, ...
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-08-21
公開日2020-09-16
最終更新日2020-11-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Antibody-mediated disruption of the SARS-CoV-2 spike glycoprotein.
Nat Commun, 11, 2020
7A95
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SARS-CoV-2 Spike Glycoprotein with 1 ACE2 Bound and 1 RBD Erect in Clockwise Direction
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7BNN
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BU of 7bnn by Molmil
Open conformation of D614G SARS-CoV-2 spike with 1 Erect RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2021-01-22
公開日2021-02-03
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The effect of the D614G substitution on the structure of the spike glycoprotein of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BBH
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BU of 7bbh by Molmil
Structure of Coronavirus Spike from Smuggled Guangdong Pangolin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Surface glycoprotein
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-12-17
公開日2020-12-30
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure and binding properties of Pangolin-CoV spike glycoprotein inform the evolution of SARS-CoV-2.
Nat Commun, 12, 2021
7A5S
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BU of 7a5s by Molmil
Complex of SARS-CoV-2 spike and CR3022 Fab (Homogeneous Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 Fab Heavy Chain, CR3022 Fab Light Chain, ...
著者Wrobel, A.G, Benton, D.J, Rosenthal, P.B, Gamblin, S.J.
登録日2020-08-21
公開日2020-09-16
最終更新日2020-11-04
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Antibody-mediated disruption of the SARS-CoV-2 spike glycoprotein.
Nat Commun, 11, 2020
7A96
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BU of 7a96 by Molmil
SARS-CoV-2 Spike Glycoprotein with 1 ACE2 Bound and 1 RBD Erect in Anticlockwise Direction
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7A97
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BU of 7a97 by Molmil
SARS-CoV-2 Spike Glycoprotein with 2 ACE2 Bound
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7A92
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Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Unmasked Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-30
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7A94
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SARS-CoV-2 Spike Glycoprotein with 1 ACE2 Bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
7A91
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BU of 7a91 by Molmil
Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Non-Uniform Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-16
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020

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