Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5KP5
DownloadVisualize
BU of 5kp5 by Molmil
Crystal Structure of the Curacin Biosynthetic Pathway HMG Synthase
分子名称: CurD, SULFATE ION
著者Maloney, F.P, Smith, J.L.
登録日2016-07-02
公開日2016-08-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Anatomy of the beta-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.
Proc.Natl.Acad.Sci.USA, 113, 2016
8G7X
DownloadVisualize
BU of 8g7x by Molmil
Human fatty acid synthase dehydratase domain
分子名称: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Akey, D.L, Konwerski, J.R, McCullough, T.M, Smith, J.L.
登録日2023-02-17
公開日2023-06-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.815 Å)
主引用文献Structure of a modular polyketide synthase reducing region.
Structure, 31, 2023
8G7W
DownloadVisualize
BU of 8g7w by Molmil
Type I modPKS reducing region
分子名称: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION, ...
著者McCullough, T.M, Smith, J.L.
登録日2023-02-17
公開日2023-06-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure of a modular polyketide synthase reducing region.
Structure, 31, 2023
5KP7
DownloadVisualize
BU of 5kp7 by Molmil
Crystal Structure of the Curacin Biosynthetic Pathway HMG Synthase in Complex with Holo Donor-ACP
分子名称: 4'-PHOSPHOPANTETHEINE, CurB, CurD, ...
著者Maloney, F.P, Smith, J.L.
登録日2016-07-02
公開日2016-08-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Anatomy of the beta-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KP6
DownloadVisualize
BU of 5kp6 by Molmil
Crystal Structure of the Curacin Biosynthetic Pathway HMG Synthase in Complex with Apo Donor-ACP
分子名称: CurB, CurD
著者Maloney, F.P, Smith, J.L.
登録日2016-07-02
公開日2016-08-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Anatomy of the beta-branching enzyme of polyketide biosynthesis and its interaction with an acyl-ACP substrate.
Proc.Natl.Acad.Sci.USA, 113, 2016
4TPL
DownloadVisualize
BU of 4tpl by Molmil
West Nile Virus Non-structural protein 1 (NS1) Form 1 crystal
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, OXTOXYNOL-10, ...
著者Akey, D.L, Smith, J.L.
登録日2014-06-08
公開日2014-10-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Use of massively multiple merged data for low-resolution S-SAD phasing and refinement of flavivirus NS1.
Acta Crystallogr.,Sect.D, 70, 2014
7UCH
DownloadVisualize
BU of 7uch by Molmil
AprA Methyltransferase 1 - GNAT in complex with Mn2+ , SAM, and Di-methyl-malonate
分子名称: AprA Methyltransferase 1, GLYCEROL, MANGANESE (II) ION, ...
著者Skiba, M.A, Lao, Y, Smith, J.L.
登録日2022-03-16
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural Basis for Control of Methylation Extent in Polyketide Synthase Metal-Dependent C -Methyltransferases.
Acs Chem.Biol., 17, 2022
6VY9
DownloadVisualize
BU of 6vy9 by Molmil
Crystal structure of NotF prenyltransferase
分子名称: Deoxybrevianamide E synthase notF
著者Dan, Q, Smith, J.L.
登録日2020-02-25
公開日2021-02-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Data Science-Driven Analysis of Substrate-Permissive Diketopiperazine Reverse Prenyltransferase NotF: Applications in Protein Engineering and Cascade Biocatalytic Synthesis of (-)-Eurotiumin A.
J.Am.Chem.Soc., 144, 2022
6WEQ
DownloadVisualize
BU of 6weq by Molmil
DENV1 NS1 in complex with neutralizing 2B7 Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B7 Fab fragment heavy chain, 2B7 Fab fragment light chain, ...
著者Akey, D.L, Smith, J.L.
登録日2020-04-02
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for antibody inhibition of flavivirus NS1-triggered endothelial dysfunction.
Science, 371, 2021
6WER
DownloadVisualize
BU of 6wer by Molmil
DENV2 NS1 in complex with neutralizing 2B7 Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B7 Fab heavy chain, 2B7 Fab light chain, ...
著者Akey, D.L, Smith, J.L.
登録日2020-04-02
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.96 Å)
主引用文献Structural basis for antibody inhibition of flavivirus NS1-triggered endothelial dysfunction.
Science, 371, 2021
4XVZ
DownloadVisualize
BU of 4xvz by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with Mg
分子名称: CHLORIDE ION, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase
著者Akey, D.L, Smith, J.L.
登録日2015-01-28
公開日2015-03-04
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4XVY
DownloadVisualize
BU of 4xvy by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with SAH
分子名称: MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Akey, D.L, Smith, J.L.
登録日2015-01-28
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
1NON
DownloadVisualize
BU of 1non by Molmil
PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus
分子名称: PyrR bifunctional protein
著者Switzer, R.L, Chander, P, Smith, J.L, Halbig, K.M, Miller, J.K, Bonner, H.K, Grabner, G.K.
登録日2003-01-16
公開日2004-05-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides
J.Bacteriol., 187, 2005
1O57
DownloadVisualize
BU of 1o57 by Molmil
CRYSTAL STRUCTURE OF THE PURINE OPERON REPRESSOR OF BACILLUS SUBTILIS
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
著者Sinha, S.C, Krahn, J, Shin, B.S, Tomchick, D.R, Zalkin, H, Smith, J.L.
登録日2003-04-20
公開日2003-08-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Purine Repressor of Bacillus Subtilis: A Novel Combination of Domains Adapted for Transcription Regulation
J.Bacteriol., 185, 2003
1P4A
DownloadVisualize
BU of 1p4a by Molmil
Crystal Structure of the PurR complexed with cPRPP
分子名称: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, Pur operon repressor
著者Bera, A.K, Zhu, J, Zalkin, H, Smith, J.L.
登録日2003-04-22
公開日2003-12-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Functional dissection of the Bacillus subtilis pur operator site.
J.Bacteriol., 185, 2003
5IOS
DownloadVisualize
BU of 5ios by Molmil
Flavin-dependent thymidylate synthase R90A variant in complex with FAD and deoxyuridine monophosphate
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase ThyX
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
1XZN
DownloadVisualize
BU of 1xzn by Molmil
PYRR, THE REGULATOR OF THE PYRIMIDINE BIOSYNTHETIC OPERON IN BACILLUS CALDOLYTICUS, sulfate-bound form
分子名称: MAGNESIUM ION, PyrR bifunctional protein, SULFATE ION
著者Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L.
登録日2004-11-12
公開日2005-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides.
J.Bacteriol., 187, 2005
1XZ8
DownloadVisualize
BU of 1xz8 by Molmil
Pyrr, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus, Nucleotide-bound form
分子名称: GUANOSINE-3'-MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L.
登録日2004-11-11
公開日2005-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides.
J.Bacteriol., 187, 2005
5IOT
DownloadVisualize
BU of 5iot by Molmil
Flavin-dependent thymidylate synthase R174A variant in complex with FAD and dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase ThyX
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
5IOQ
DownloadVisualize
BU of 5ioq by Molmil
Flavin-dependent thymidylate synthase in complex with FAD and deoxyuridine
分子名称: 2'-DEOXYURIDINE, FLAVIN-ADENINE DINUCLEOTIDE, TRIETHYLENE GLYCOL, ...
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
5IOR
DownloadVisualize
BU of 5ior by Molmil
Flavin-dependent thymidylate synthase in complex with FAD and 2'-deoxyuridine-5'-monosulfate
分子名称: 2'-deoxy-5'-O-sulfouridine, FLAVIN-ADENINE DINUCLEOTIDE, RIBOFLAVIN, ...
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
3U1T
DownloadVisualize
BU of 3u1t by Molmil
Haloalkane Dehalogenase, DmmA, of marine microbial origin
分子名称: CHLORIDE ION, DmmA Haloalkane Dehalogenase, MALONATE ION
著者Gehret, J.J, Smith, J.L.
登録日2011-09-30
公開日2011-12-28
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and activity of DmmA, a marine haloalkane dehalogenase.
Protein Sci., 21, 2012
1YKS
DownloadVisualize
BU of 1yks by Molmil
Crystal structure of yellow fever virus NS3 helicase
分子名称: Genome polyprotein [contains: Flavivirin protease NS3 catalytic subunit]
著者Wu, J, Bera, A.K, Kuhn, R.J, Smith, J.L.
登録日2005-01-18
公開日2005-08-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the flavivirus helicase: implications for catalytic activity, protein interactions, and proteolytic processing.
J.Virol., 79, 2005
3V7I
DownloadVisualize
BU of 3v7i by Molmil
Germicidin synthase (Gcs) from Streptomyces coelicolor, a type III polyketide synthase
分子名称: Putative polyketide synthase
著者Akey, D.L, Smith, J.L, Geders, T.W.
登録日2011-12-21
公開日2012-04-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Biochemical and Structural Characterization of Germicidin Synthase: Analysis of a Type III Polyketide Synthase That Employs Acyl-ACP as a Starter Unit Donor.
J.Am.Chem.Soc., 134, 2012
1ZNN
DownloadVisualize
BU of 1znn by Molmil
Structure of the synthase subunit of PLP synthase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, PLP SYNTHASE, SULFATE ION
著者Zhu, J, Burgner, J.W, Harms, E, Belitsky, B.R, Smith, J.L.
登録日2005-05-11
公開日2005-05-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A New Arrangement of (beta/alpha)8 Barrels in the Synthase Subunit of PLP Synthase.
J.Biol.Chem., 280, 2005

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon