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7F76
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BU of 7f76 by Molmil
Crystal Structure of FMN-dependent NADPH-quinone reductase (azoR) from Bacillus cohnii
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADPH-quinone reductase (azoR), GLYCEROL, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2021-06-28
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of FMN-dependent NADPH-quinone reductase (azoR) from Bacillus cohnii
To Be Published
3A1N
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BU of 3a1n by Molmil
Crystal structure of L-Threonine dehydrogenase from Hyperthermophilic Archaeon Thermoplasma volcanium
分子名称: NDP-sugar epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2009-04-18
公開日2010-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium.
J.Biol.Chem., 287, 2012
3ABI
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BU of 3abi by Molmil
Crystal Structure of L-Lysine Dehydrogenase from Hyperthermophilic Archaeon Pyrococcus horikoshii
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative uncharacterized protein PH1688, SULFATE ION
著者Yoneda, K, Sakuraba, H, Fukuda, J, Ohshima, T.
登録日2009-12-14
公開日2009-12-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献First crystal structure of L-lysine 6-dehydrogenase as an NAD-dependent amine dehydrogenase.
J.Biol.Chem., 285, 2010
3AJR
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BU of 3ajr by Molmil
Crystal structure of L-3-Hydroxynorvaline bound L-Threonine dehydrogenase (Y137F) from Hyperthermophilic Archaeon Thermoplasma volcanium
分子名称: (3R)-3-hydroxy-L-norvaline, (4S)-2-METHYL-2,4-PENTANEDIOL, NDP-sugar epimerase, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2010-06-14
公開日2011-06-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium.
J.Biol.Chem., 287, 2012
1WY6
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BU of 1wy6 by Molmil
Crystal Structure of Hypothetical Protein [ST1625p] from Hyperthermophilic Archaeon Sulfolobus tokodaii
分子名称: hypothetical protein ST1625
著者Yoneda, K, Sakuraba, H, Tsuge, H, Katunuma, N, Kuramitsu, S, Kawabata, T, Ohshima, T.
登録日2005-02-07
公開日2005-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The first crystal structure of an archaeal helical repeat protein.
Acta Crystallogr.,Sect.F, 61, 2005
1V9L
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BU of 1v9l by Molmil
L-glutamate dehydrogenase from Pyrobaculum islandicum complexed with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glutamate dehydrogenase
著者Bhuiya, M.W, Sakuraba, H, Ohshima, T, Imagawa, T, Katunuma, N, Tsuge, H.
登録日2004-01-26
公開日2004-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The First Crystal Structure of Hyperthermostable NAD-dependent Glutamate Dehydrogenase from Pyrobaculum islandicum
J.Mol.Biol., 345, 2005
6JXN
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BU of 6jxn by Molmil
Crystal Structure of Indigo reductase from Bacillus smithii type strain DSM 4216
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, FLAVIN MONONUCLEOTIDE, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2019-04-24
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural and biochemical characterization of an extremely thermostable FMN-dependent NADH-indigo reductase from Bacillus smithii.
Int.J.Biol.Macromol., 164, 2020
6JXS
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BU of 6jxs by Molmil
Crystal Structure of Indigo reductase (Y151F) from Bacillus smithii type strain DSM 4216
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2019-04-24
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and biochemical characterization of an extremely thermostable FMN-dependent NADH-indigo reductase from Bacillus smithii.
Int.J.Biol.Macromol., 164, 2020
5B1Y
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BU of 5b1y by Molmil
Crystal structure of NADPH bound carbonyl reductase from Aeropyrum pernix
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Yoneda, K, Sakuraba, H, Fukuda, Y, Araki, T, Ohshima, T.
登録日2015-12-22
公開日2016-06-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Catalytic properties and crystal structure of thermostable NAD(P)H-dependent carbonyl reductase from the hyperthermophilic archaeon Aeropyrum pernix K1.
Enzyme.Microb.Technol., 91, 2016
3W6U
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BU of 3w6u by Molmil
Crystal structure of NADP bound L-serine 3-dehydrogenase from Hyperthermophilic Archaeon Pyrobaculum calidifontis
分子名称: 6-phosphogluconate dehydrogenase, NAD-binding protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2013-02-22
公開日2014-01-15
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the NADP+and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Extremophiles, 22, 2018
3WS7
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BU of 3ws7 by Molmil
The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis
分子名称: 6-phosphogluconate dehydrogenase, NAD-binding protein, ACETIC ACID, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2014-03-04
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure of the NADP+and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Extremophiles, 22, 2018
8HMO
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BU of 8hmo by Molmil
Crystal Structure of metal-dependent hydrolase complexed with manganese from Bacillus smithii
分子名称: MANGANESE (II) ION, Metal-dependent hydrolase
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2022-12-05
公開日2023-12-06
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal Structure of metal-dependent hydrolase complexed with manganese from Bacillus smithii
To Be Published
2YY7
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BU of 2yy7 by Molmil
Crystal structure of thermolabile L-threonine dehydrogenase from Flavobacterium frigidimaris KUC-1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, GLYCEROL, ...
著者Yoneda, K, Sakuraba, H, Oikawa, T, Muraoka, I, Ohshima, T.
登録日2007-04-27
公開日2008-04-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.061 Å)
主引用文献Crystal structure of UDP-galactose 4-epimerase-like L-threonine dehydrogenase belonging to the intermediate short-chain dehydrogenase-reductase superfamily
Febs J., 277, 2010
2YVS
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BU of 2yvs by Molmil
Crystal structure of glycolate oxidase subunit GlcE from Thermus thermophilus HB8
分子名称: Glycolate oxidase subunit GlcE
著者Yoneda, K, Sakuraba, H, Kuramitsu, S, Ohshima, T.
登録日2007-04-15
公開日2008-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of glycolate oxidase subunit GlcE from Thermus thermophilus HB8
To be Published
3A9W
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BU of 3a9w by Molmil
Crystal structure of L-Threonine bound L-Threonine dehydrogenase (Y137F) from Hyperthermophilic Archaeon Thermoplasma volcanium
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, NDP-sugar epimerase, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2009-11-07
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium.
J.Biol.Chem., 287, 2012
3A4V
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BU of 3a4v by Molmil
Crystal structure of pyruvate bound L-Threonine dehydrogenase from Hyperthermophilic Archaeon Thermoplasma volcanium
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NDP-sugar epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2009-07-20
公開日2010-07-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of Binary and Ternary Complexes of Archaeal UDP-galactose 4-Epimerase-like L-Threonine Dehydrogenase from Thermoplasma volcanium.
J.Biol.Chem., 287, 2012
3W82
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BU of 3w82 by Molmil
Human alpha-L-iduronidase in complex with iduronic acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
著者Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
登録日2013-03-11
公開日2013-08-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
3W81
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BU of 3w81 by Molmil
Human alpha-l-iduronidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
著者Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
登録日2013-03-11
公開日2013-08-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
3VPX
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BU of 3vpx by Molmil
Crystal structure of leucine dehydrogenase from a psychrophilic bacterium Sporosarcina psychrophila.
分子名称: Leucine dehydrogenase
著者Zhao, Y, Wakamatsu, T, Doi, K, Sakuraba, H, Ohshima, T.
登録日2012-03-14
公開日2013-02-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A psychrophilic leucine dehydrogenase from Sporosarcina psychrophila: Purification, characterization, gene sequencing and crystal structure analysis
J.MOL.CATAL., B ENZYM., 83, 2012
3VYL
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BU of 3vyl by Molmil
Structure of L-ribulose 3-epimerase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, L-ribulose 3-epimerase, MANGANESE (II) ION
著者Uechi, K, Sakuraba, H, Takata, G.
登録日2012-09-27
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insight into L-ribulose 3-epimerase from Mesorhizobium loti.
Acta Crystallogr.,Sect.D, 69, 2013
3WXB
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BU of 3wxb by Molmil
Crystal structure of NADPH bound carbonyl reductase from chicken fatty liver
分子名称: 1,2-ETHANEDIOL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Uncharacterized protein
著者Yoneda, K, Sakuraba, H, Fukuda, Y, Sone, T, Araki, T, Ohshima, T.
登録日2014-07-29
公開日2015-07-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献A novel NAD(P)H-dependent carbonyl reductase specifically expressed in the thyroidectomized chicken fatty liver: catalytic properties and crystal structure.
Febs J., 282, 2015
3WQO
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BU of 3wqo by Molmil
Crystal structure of D-tagatose 3-epimerase-like protein
分子名称: MANGANESE (II) ION, Uncharacterized protein MJ1311
著者Uechi, K, Takata, G, Yoneda, K, Ohshima, T, Sakuraba, H.
登録日2014-01-28
公開日2014-07-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structure of D-tagatose 3-epimerase-like protein from Methanocaldococcus jannaschii
Acta Crystallogr.,Sect.F, 70, 2014
3W6Z
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BU of 3w6z by Molmil
Crystal structure of NADP bound L-serine 3-dehydrogenase (K170M) from Hyperthermophilic Archaeon Pyrobaculum calidifontis
分子名称: 6-phosphogluconate dehydrogenase, NAD-binding protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2013-02-27
公開日2014-01-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structure of the NADP+and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Extremophiles, 22, 2018
5BRO
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BU of 5bro by Molmil
Crystal structure of modified HexB (modB)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase subunit beta, FORMIC ACID, ...
著者Kitakaze, K, Maita, N, Itoh, K.
登録日2015-06-01
公開日2016-05-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protease-resistant modified human beta-hexosaminidase B ameliorates symptoms in GM2 gangliosidosis model.
J.Clin.Invest., 126, 2016
4NXS
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BU of 4nxs by Molmil
Crystal structure of human alpha-galactosidase A in complex with 1-deoxygalactonojirimycin-pFPhT
分子名称: (2R,3S,4R,5S)-N-(4-fluorophenyl)-3,4,5-trihydroxy-2-(hydroxymethyl)piperidine-1-carbothioamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Johnson, J.L, Drury, J.E, Lieberman, R.L.
登録日2013-12-09
公開日2014-06-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5493 Å)
主引用文献Molecular Basis of 1-Deoxygalactonojirimycin Arylthiourea Binding to Human alpha-Galactosidase A: Pharmacological Chaperoning Efficacy on Fabry Disease Mutants.
Acs Chem.Biol., 9, 2014

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