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3BW6
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Crystal structure of the longin domain of yeast Ykt6
分子名称: SULFATE ION, Synaptobrevin homolog YKT6
著者Pylypenko, O, Schonichen, A, Ludwig, D, Ungermann, C, Goody, R.S, Rak, A, Geyer, M.
登録日2008-01-08
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Farnesylation of the SNARE protein Ykt6 increases its stability and helical folding.
J.Mol.Biol., 377, 2008
4AT3
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BU of 4at3 by Molmil
CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH CPD5N
分子名称: (5Z)-5-(carbamoylimino)-3-[(5R)-6,7,8,9-tetrahydro-5H-benzo[7]annulen-5-ylsulfanyl]-2,5-dihydroisothiazole-4-carboxamide, BDNF/NT-3 GROWTH FACTORS RECEPTOR
著者Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
登録日2012-05-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
4AT5
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CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH GW2580
分子名称: 5-{3-methoxy-4-[(4-methoxybenzyl)oxy]benzyl}pyrimidine-2,4-diamine, BDNF/NT-3 GROWTH FACTORS RECEPTOR, GLYCEROL
著者Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
登録日2012-05-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
4AT4
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CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH EX429
分子名称: 1-[4-(4-aminothieno[2,3-d]pyrimidin-5-yl)phenyl]-3-[2-fluoro-5-(trifluoromethyl)phenyl]urea, BDNF/NT-3 GROWTH FACTORS RECEPTOR
著者Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
登録日2012-05-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012
3CPJ
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BU of 3cpj by Molmil
Crystal structure of Ypt31 in complex with yeast Rab-GDI
分子名称: CHLORIDE ION, GTP-binding protein YPT31/YPT8, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
登録日2008-03-31
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
3CPI
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BU of 3cpi by Molmil
Crystal structure of yeast Rab-GDI
分子名称: Rab GDP-dissociation inhibitor
著者Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
登録日2008-03-31
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
3CPH
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BU of 3cph by Molmil
Crystal structure of Sec4 in complex with Rab-GDI
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rab GDP-dissociation inhibitor, ...
著者Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
登録日2008-03-31
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
4CP6
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The Crystal structure of Pneumococcal vaccine antigen PcpA
分子名称: CHOLINE BINDING PROTEIN PCPA
著者Vallee, F, Steier, V, Oloo, E, Chawla, D, Vonrhein, C, Steinmetz, A, Mathieu, M, Rak, A, Mikol, V, Oomen, R.
登録日2014-01-31
公開日2015-02-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献The Crystal Structure of Pneumoccocal Vaccine Antigen Pcpa
To be Published
1KY2
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BU of 1ky2 by Molmil
GPPNHP-BOUND YPT7P AT 1.6 A RESOLUTION
分子名称: GTP-BINDING PROTEIN YPT7P, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Constantinescu, A.-T, Rak, A, Scheidig, A.J.
登録日2002-02-02
公開日2002-06-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rab-subfamily-specific regions of Ypt7p are structurally different from other RabGTPases.
Structure, 10, 2002
1KY3
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GDP-BOUND YPT7P AT 1.35 A RESOLUTION
分子名称: GTP-BINDING PROTEIN YPT7P, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Constantinescu, A.-T, Rak, A, Scheidig, A.J.
登録日2002-02-02
公開日2002-06-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Rab-subfamily-specific regions of Ypt7p are structurally different from other RabGTPases.
Structure, 10, 2002
1DFE
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BU of 1dfe by Molmil
NMR STRUCTURE OF RIBOSOMAL PROTEIN L36 FROM THERMUS THERMOPHILUS
分子名称: L36 RIBOSOMAL PROTEIN, ZINC ION
著者Hard, T, Rak, A, Allard, P, Kloo, L, Garber, M.
登録日1999-11-19
公開日1999-12-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of ribosomal protein L36 from Thermus thermophilus reveals a zinc-ribbon-like fold.
J.Mol.Biol., 296, 2000
1DGZ
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RIBOSMAL PROTEIN L36 FROM THERMUS THERMOPHILUS: NMR STRUCTURE ENSEMBLE
分子名称: PROTEIN (L36 RIBOSOMAL PROTEIN), ZINC ION
著者Hard, T, Rak, A, Allard, P, Kloo, L, Garber, M.
登録日1999-11-27
公開日1999-12-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of ribosomal protein L36 from Thermus thermophilus reveals a zinc-ribbon-like fold.
J.Mol.Biol., 296, 2000
3BN0
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BU of 3bn0 by Molmil
The ribosomal protein S16 from Aquifex aeolicus
分子名称: 30S ribosomal protein S16, GLYCEROL
著者Pylypenko, O, Rak, A.
登録日2007-12-13
公開日2008-05-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Extreme temperature tolerance of a hyperthermophilic protein coupled to residual structure in the unfolded state
J.Mol.Biol., 379, 2008
2W8G
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BU of 2w8g by Molmil
Aplysia californica AChBP bound to in silico compound 35
分子名称: (3-ENDO,8-ANTI)-8-BENZYL-3-(10,11-DIHYDRO-5H-DIBENZO[A,D][7]ANNULEN-5-YLOXY)-8-AZONIABICYCLO[3.2.1]OCTANE, SOLUBLE ACETYLCHOLINE RECEPTOR
著者Ulens, C, Akdemir, A, Jongejan, A, van Elk, R, Edink, E, Bertrand, S, Perrakis, A, Leurs, R, Smit, A.B, Sixma, T.K, Bertrand, D, de Esch, I.J.
登録日2009-01-16
公開日2009-04-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Use of Acetylcholine Binding Protein in the Search for Novel Alpha7 Nicotinic Receptor Ligands. In Silico Docking, Pharmacological Screening, and X- Ray Analysis.
J.Med.Chem., 52, 2009
7ZW4
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BU of 7zw4 by Molmil
Crystal structure of Talin R7R8 domains with Caskin-2 LD-peptide
分子名称: Caskin-2, Talin-1
著者Celie, P.H.N, Joosten, R.P, Sonnenberg, A, Perrakis, A.
登録日2022-05-18
公開日2023-05-31
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Caskin2 is a novel talin- and Abi1-binding protein that promotes cell motility.
J.Cell.Sci., 137, 2024
1TC3
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BU of 1tc3 by Molmil
TRANSPOSASE TC3A1-65 FROM CAENORHABDITIS ELEGANS
分子名称: DNA (5'-D(*AP*GP*GP*GP*GP*GP*GP*GP*TP*CP*CP*TP*AP*TP*AP*GP*A P*AP*CP*TP*T)-3'), DNA (5'-D(*AP*GP*TP*TP*CP*TP*AP*TP*AP*GP*GP*AP*CP*CP*CP*CP*C P*CP*CP*T)-3'), PROTEIN (TC3 TRANSPOSASE)
著者Van Pouderoyen, G, Ketting, R.F, Perrakis, A, Plasterk, R.H.A, Sixma, T.K.
登録日1997-07-07
公開日1997-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the specific DNA-binding domain of Tc3 transposase of C.elegans in complex with transposon DNA.
EMBO J., 16, 1997
7ZOM
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BU of 7zom by Molmil
Crystal structure of N-terminal catalytic domain of human PLAAT3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Phospholipase A and acyltransferase 3
著者von Castelmur, E, Perrakis, A.
登録日2022-04-26
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal structure of N-terminal catalytic domain of human PLAAT3
To Be Published
7ZU3
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Crystal Structure of Human Parechovirus 1 2A protein lacking the C-terminal oligomerisation helix
分子名称: Protein 2A
著者von Castelmur, E, Perrakis, A.
登録日2022-05-11
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Human Parechovirus 1 2A protein
To Be Published
7ZUO
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BU of 7zuo by Molmil
Crystal Structure of Ljungan virus 4 2A2 protein, P212121 form
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者von Castelmur, E, Perrakis, A.
登録日2022-05-12
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural Plasticity of Parechovirus H/NC-motif 2A proteins
To Be Published
7ZUA
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Crystal Structure of Ljungan virus 4 2A2 protein I222 crystal form
分子名称: ACETATE ION, Protein 2A
著者von Castelmur, E, Perrakis, A.
登録日2022-05-11
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural plasticity of Parechovirus family H-box 2A proteins
To Be Published
7ZV1
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Crystal Structure of Aichivirus A 2A protein L64M, L109M mutant
分子名称: Protein 2A
著者von Castelmur, E, Perrakis, A.
登録日2022-05-13
公開日2023-05-31
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural and functional repurposing of picornavirus H/NC-motif 2A proteins
To Be Published
7ZTW
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Crystal Structure of Human Parechovirus 1 2A protein
分子名称: ACETATE ION, Protein 2A, SODIUM ION
著者von Castelmur, E, Perrakis, A.
登録日2022-05-11
公開日2023-05-24
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Human Parechovirus 1 2A protein
To Be Published
7ZU4
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Crystal Structure of Human Parechovirus 1 2A protein lacking the C-terminal oligomerisation helix
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Protein 2A, ...
著者von Castelmur, E, Perrakis, A.
登録日2022-05-11
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human Parechovirus 1 2A protein
To Be Published
7ZV6
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Crystal Structure of Aichivirus A 2A protein
分子名称: Protein 2A
著者von Castelmur, E, Perrakis, A.
登録日2022-05-13
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural and functional repurposing of picornavirus H/NC-motif 2A proteins
To Be Published
8A2F
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Crystal Structure of Ljunganvirus 1 2A protein
分子名称: 2A protein
著者von Castelmur, E, Zhu, L, Wang, X, Fry, E, Ren, J, Perrakis, A, Stuart, D.I.
登録日2022-06-03
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural plasticity of 2A proteins in the Parechovirus family
To Be Published

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