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4E8M
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BU of 4e8m by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8V
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BU of 4e8v by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BARIUM ION, Group IIC intron, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.995 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4E8R
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BU of 4e8r by Molmil
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CESIUM ION, Group IIC intron, ...
著者Marcia, M, Pyle, A.M.
登録日2012-03-20
公開日2012-11-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Visualizing Group II Intron Catalysis through the Stages of Splicing.
Cell(Cambridge,Mass.), 151, 2012
4Y1O
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BU of 4y1o by Molmil
Oceanobacillus iheyensis group II intron domain 1
分子名称: MAGNESIUM ION, POTASSIUM ION, group II intron, ...
著者Zhao, C, Rajashankar, K.R, Marcia, M, Pyle, A.M.
登録日2015-02-08
公開日2015-10-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of group II intron domain 1 reveals a template for RNA assembly.
Nat.Chem.Biol., 11, 2015
4Y1N
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BU of 4y1n by Molmil
Oceanobacillus iheyensis group II intron domain 1 with iridium hexamine
分子名称: IRIDIUM HEXAMMINE ION, MAGNESIUM ION, POTASSIUM ION, ...
著者Zhao, C, Rajashankar, K.R, Marcia, M, Pyle, A.M.
登録日2015-02-08
公開日2015-10-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of group II intron domain 1 reveals a template for RNA assembly.
Nat.Chem.Biol., 11, 2015
6M6R
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BU of 6m6r by Molmil
Crystal structure of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3) C-terminal domain with 5'-ppp 8-mer ssRNA
分子名称: Dicer Related Helicase, RNA (5'-R(*(GTP)P*GP*CP*CP*GP*CP*CP*C)-3'), ZINC ION
著者Li, K, Zheng, J, Wirawan, M, Xiong, Z, Fedorova, O, Griffin, P, Plyle, A, Luo, D.
登録日2020-03-16
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3).
Nucleic Acids Res., 49, 2021
6M6Q
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BU of 6m6q by Molmil
Crystal structure of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3) N-terminal domain
分子名称: Dicer Related Helicase
著者Li, K, Zheng, J, Wirawan, M, Xiong, Z, Fedorova, O, Griffin, P, Plyle, A, Luo, D.
登録日2020-03-16
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3).
Nucleic Acids Res., 49, 2021
6M6S
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BU of 6m6s by Molmil
Crystal structure of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3) C-terminal domain with 5'-ppp 12-mer dsRNA
分子名称: Dicer Related Helicase, RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ZINC ION
著者Li, K, Zheng, J, Wirawan, M, Xiong, Z, Fedorova, O, Griffin, P, Plyle, A, Luo, D.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3).
Nucleic Acids Res., 49, 2021
3O8D
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BU of 3o8d by Molmil
Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, HCV NS3 protease/helicase, ...
著者Appleby, T.C, Somoza, J.R.
登録日2010-08-02
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV.
J.Mol.Biol., 405, 2011
3O8C
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BU of 3o8c by Molmil
Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV
分子名称: HCV NS3 protease/helicase, RNA (5'-R(P*UP*(5BU)P*UP*UP*UP*U)-3'), SULFATE ION, ...
著者Appleby, T.C, Somoza, J.R.
登録日2010-08-02
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV.
J.Mol.Biol., 405, 2011
5UC6
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BU of 5uc6 by Molmil
Structural insights into IL-1 alpha recognition by a naphthyl-modified aptamer that mimics IL-1RI Domain III
分子名称: DNA (5'-D(*CP*G)-R(P*(85Y))-D(P*GP*AP*G)-R(P*(85Y)P*(85Y))-D(P*A)-R(P*(85Y))-D(P*GP*GP*G)-R(P*(85Y)P*(85Y))-D(P*AP*GP*AP*G)-R(P*(85Y))-D(P*CP*GP*(ATD))-3'), Interleukin-1 alpha, MAGNESIUM ION, ...
著者Ren, X, Pyle, A.
登録日2016-12-21
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for IL-1 alpha recognition by a modified DNA aptamer that specifically inhibits IL-1 alpha signaling.
Nat Commun, 8, 2017
3G78
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BU of 3g78 by Molmil
Insight into group II intron catalysis from revised crystal structure
分子名称: Group II intron, Ligated EXON product, MAGNESIUM ION, ...
著者Wang, J.
登録日2009-02-09
公開日2010-02-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Inclusion of weak high-resolution X-ray data for improvement of a group II intron structure.
Acta Crystallogr.,Sect.D, 66, 2010
6Q39
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BU of 6q39 by Molmil
Complex of Arginase 2 with Example 49
分子名称: 3-[(3~{S},4~{R})-4-azanyl-4-carboxy-1-[[(2~{S})-piperidin-2-yl]methyl]pyrrolidin-3-yl]propyl-tris(oxidanyl)boranuide, Arginase-2, mitochondrial, ...
著者Podjarny, A.D, Van Zandt, M.C, Cousido-Siah, A.
登録日2018-12-03
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.213 Å)
主引用文献Discovery ofN-Substituted 3-Amino-4-(3-boronopropyl)pyrrolidine-3-carboxylic Acids as Highly Potent Third-Generation Inhibitors of Human Arginase I and II.
J.Med.Chem., 62, 2019
6Q37
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BU of 6q37 by Molmil
Complex of Arginase 2 with Example 23
分子名称: 1,2-ETHANEDIOL, 3-[(3~{S},4~{R})-4-azanyl-4-carboxy-pyrrolidin-3-yl]propyl-tris(oxidanyl)boranuide, Arginase-2, ...
著者Podjarny, A.D, Van Zandt, M.C, Cousido-Siah, A.
登録日2018-12-03
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Discovery ofN-Substituted 3-Amino-4-(3-boronopropyl)pyrrolidine-3-carboxylic Acids as Highly Potent Third-Generation Inhibitors of Human Arginase I and II.
J.Med.Chem., 62, 2019
7UIN
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BU of 7uin by Molmil
CryoEM Structure of an Group II Intron Retroelement
分子名称: AMMONIUM ION, DNA (37-MER), E.r IIC Intron, ...
著者Chung, K, Xu, L.
登録日2022-03-29
公開日2022-11-23
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of a mobile intron retroelement poised to attack its structured DNA target
Science, 378, 2022
7UIM
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BU of 7uim by Molmil
CryoEM Structure of an Group II Intron Retroelement (apo-complex)
分子名称: AMMONIUM ION, E.r IIC Intron, Group II intron reverse transcriptase/maturase, ...
著者Chung, K, Xu, L.
登録日2022-03-29
公開日2022-11-23
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of a mobile intron retroelement poised to attack its structured DNA target
Science, 378, 2022
3O8B
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BU of 3o8b by Molmil
Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV
分子名称: HCV NS3 protease/helicase, SULFATE ION, ZINC ION
著者Appleby, T.C, Somoza, J.R.
登録日2010-08-02
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV.
J.Mol.Biol., 405, 2011
3O8R
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BU of 3o8r by Molmil
Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, HCV NS3 protease/helicase, ...
著者Appleby, T.C, Somoza, J.R.
登録日2010-08-03
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV.
J.Mol.Biol., 405, 2011
2LPS
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BU of 2lps by Molmil
Molecular dynamics re-refinement of domain 5 of the yeast ai5(gamma) group II intron
分子名称: RNA (34-MER)
著者Henriksen, N.M, Davis, D.R, Cheatham III, T.E.
登録日2012-02-17
公開日2012-08-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Molecular dynamics re-refinement of two different small RNA loop structures using the original NMR data suggest a common structure.
J.Biomol.Nmr, 53, 2012
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