Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6O5C
DownloadVisualize
BU of 6o5c by Molmil
X-ray crystal structure of metal-dependent transcriptional regulator MtsR
分子名称: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, Putative metal-dependent transcriptional regulator
著者Do, H, Kumaraswami, M.
登録日2019-03-01
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Metal sensing and regulation of adaptive responses to manganese limitation by MtsR is critical for group A streptococcus virulence.
Nucleic Acids Res., 47, 2019
6DQL
DownloadVisualize
BU of 6dql by Molmil
Crystal structure of Regulator of Proteinase B RopB complexed with SIP
分子名称: Regulator of Proteinase B RopB, SpeB-inducing peptide (SIP)
著者Do, H, Makthal, N, VanderWal, A.R, Olsen, R.J, Musser, J.M, Kumaraswami, M.
登録日2018-06-11
公開日2019-05-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Environmental pH and peptide signaling control virulence of Streptococcus pyogenes via a quorum-sensing pathway.
Nat Commun, 10, 2019
3O2J
DownloadVisualize
BU of 3o2j by Molmil
Structure of the GluA2 NTD-dimer interface mutant, N54A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2
著者Rossmann, M, Sukumaran, M, Penn, A.C, Veprintsev, D.B, Greger, I.H.
登録日2010-07-22
公開日2011-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Subunit-selective N-terminal domain associations organize the formation of AMPA receptor heteromers
Embo J., 30, 2011
3N6V
DownloadVisualize
BU of 3n6v by Molmil
Structure of the GluA2 NTD-dimer interface mutant, T78A
分子名称: Glutamate receptor 2
著者Rossmann, M, Sukumaran, M, Greger, I.H.
登録日2010-05-26
公開日2011-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Subunit-selective N-terminal domain associations organize the formation of AMPA receptor heteromers
Embo J., 30, 2011
5JLS
DownloadVisualize
BU of 5jls by Molmil
Crystal Structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes (C-terminally His tagged)
分子名称: Adhesin competence repressor, ZINC ION
著者Do, H, Kumaraswami, M.
登録日2016-04-27
公開日2017-05-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes
To Be Published
5JLU
DownloadVisualize
BU of 5jlu by Molmil
Crystal Structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes
分子名称: Adhesin competence repressor, ZINC ION
著者Do, H, Kumaraswami, M.
登録日2016-04-27
公開日2017-05-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes
To Be Published
3HSY
DownloadVisualize
BU of 3hsy by Molmil
High resolution structure of a dimeric GluR2 N-terminal domain (NTD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2, SULFATE ION, ...
著者Rossmann, M, Sukumaran, M, Penn, A.C, Veprintsev, D.B, Greger, I.H.
登録日2009-06-11
公開日2010-06-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Subunit-selective N-terminal domain associations organize the formation of AMPA receptor heteromers
Embo J., 30, 2011
5WDA
DownloadVisualize
BU of 5wda by Molmil
Structure of the PulG pseudopilus
分子名称: CALCIUM ION, General secretion pathway protein G
著者Lopez-Castilla, A, Thomassin, J.L, Bardiaux, B, Zheng, W, Nivaskumar, M, Yu, X, Nilges, M, Egelman, E.H, Izadi-Pruneyre, N, Francetic, O.
登録日2017-07-04
公開日2017-10-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structure of the calcium-dependent type 2 secretion pseudopilus.
Nat Microbiol, 2, 2017
2Y8P
DownloadVisualize
BU of 2y8p by Molmil
Crystal Structure of an Outer Membrane-Anchored Endolytic Peptidoglycan Lytic Transglycosylase (MltE) from Escherichia coli
分子名称: ENDO-TYPE MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE A
著者Artola-Recolons, C, Carrasco-Lopez, C, Llarrull, L.I, Kumarasiri, M, Lastochkin, E, Martinez-Ilarduya, I, Meindl, K, Uson, I, Mobashery, S, Hermoso, J.A.
登録日2011-02-08
公開日2011-04-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献High-Resolution Crystal Structure of Mlte, an Outer Membrane-Anchored Endolytic Peptidoglycan Lytic Transglycosylase from Escherichia Coli.
Biochemistry, 50, 2011
6K5Q
DownloadVisualize
BU of 6k5q by Molmil
Crystal structure of lysozyme complexed with a bioactive compound from Jatropha gossypiifolia
分子名称: ACETATE ION, GLYCEROL, Lysozyme C, ...
著者Kanal Elamparithi, B, Ankur, T, Sivakumar, M, Gunasekaran, K.
登録日2019-05-30
公開日2020-05-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.177 Å)
主引用文献Crystal structure of lysozyme complexed with a bioactive compound from Jatropha gossypiifolia
To Be Published
7NVJ
DownloadVisualize
BU of 7nvj by Molmil
Crystal structure of UFC1 Y110A & F121A
分子名称: GLYCEROL, Ubiquitin-fold modifier-conjugating enzyme 1
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7NVK
DownloadVisualize
BU of 7nvk by Molmil
Crystal structure of UBA5 fragment fused to the N-terminus of UFC1
分子名称: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier-conjugating enzyme 1
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7NW1
DownloadVisualize
BU of 7nw1 by Molmil
Crystal structure of UFC1 in complex with UBA5
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-16
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
6PU8
DownloadVisualize
BU of 6pu8 by Molmil
Room temperature X-ray structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate of keto-darunavir
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3,3-dihydroxy-1-phenylbutan-2-yl]carbamate, HIV-1 protease
著者Kovalevsky, A, Das, A.
登録日2019-07-17
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Visualizing Tetrahedral Oxyanion Bound in HIV-1 Protease Using Neutrons: Implications for the Catalytic Mechanism and Drug Design.
Acs Omega, 5, 2020
6PTP
DownloadVisualize
BU of 6ptp by Molmil
Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate mimic KVS-1
分子名称: HIV-1 Protease, N~2~-[(2R,5S)-5-({(2S,3S)-2-[(N-acetyl-L-threonyl)amino]-3-methylpent-4-enoyl}amino)-2-butyl-4,4-dihydroxynonanoyl]-L-glutaminyl-L-argininamide
著者Kovalevsky, A, Das, A.
登録日2019-07-16
公開日2020-06-10
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (1.85 Å), X-RAY DIFFRACTION
主引用文献Visualizing Tetrahedral Oxyanion Bound in HIV-1 Protease Using Neutrons: Implications for the Catalytic Mechanism and Drug Design.
Acs Omega, 5, 2020
6KMP
DownloadVisualize
BU of 6kmp by Molmil
100K X-ray structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate mimic KVS-1
分子名称: N~2~-[(2R,5S)-5-({(2S,3S)-2-[(N-acetyl-L-threonyl)amino]-3-methylpent-4-enoyl}amino)-2-butyl-4,4-dihydroxynonanoyl]-L-glutaminyl-L-argininamide, Protease
著者Das, A, Kovalevsky, A.
登録日2019-07-31
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Visualizing Tetrahedral Oxyanion Bound in HIV-1 Protease Using Neutrons: Implications for the Catalytic Mechanism and Drug Design.
Acs Omega, 5, 2020
3UY6
DownloadVisualize
BU of 3uy6 by Molmil
BlaR1 sensor domain from Staphylococcus aureus with N439V mutation
分子名称: GLYCEROL, Regulatory protein BlaR1, SULFATE ION
著者Baker, B.M, Borbulevych, O.Y.
登録日2011-12-05
公開日2012-02-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An amino acid position at crossroads of evolution of protein function: antibiotic sensor domain of BlaR1 protein from Staphylococcus aureus versus clasS D beta-lactamases
J.Biol.Chem., 287, 2012
5ZHV
DownloadVisualize
BU of 5zhv by Molmil
Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with zinc ion
分子名称: Transcriptional regulator, ZINC ION
著者Meera, K, Pal, R.K, Arora, A, Biswal, B.K.
登録日2018-03-13
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and functional characterization of the transcriptional regulator Rv3488 ofMycobacterium tuberculosisH37Rv.
Biochem. J., 475, 2018
5ZHC
DownloadVisualize
BU of 5zhc by Molmil
Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv
分子名称: ACETATE ION, CHLORIDE ION, Transcriptional regulator
著者Meera, K, Pal, R.K, Arora, A, Biswal, B.K.
登録日2018-03-12
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural and functional characterization of the transcriptional regulator Rv3488 ofMycobacterium tuberculosisH37Rv.
Biochem. J., 475, 2018
5ZI8
DownloadVisualize
BU of 5zi8 by Molmil
Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with cadmium ion
分子名称: CADMIUM ION, Transcriptional regulator
著者Meera, K, pal, R.K, Arora, A, Biswal, B.K.
登録日2018-03-14
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional characterization of the transcriptional regulator Rv3488 ofMycobacterium tuberculosisH37Rv.
Biochem. J., 475, 2018
4U4M
DownloadVisualize
BU of 4u4m by Molmil
Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
分子名称: 1,2-ETHANEDIOL, PYRUVIC ACID, UREA, ...
著者Manoj Kumar, P, Bhaskar, V, Manicka, S, Krishnaswamy, S.
登録日2014-07-24
公開日2015-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Crystal structure of 0.5M urea unfolded YagE, a KDG aldolase protein in complex with Pyruvate
To be published
3PUO
DownloadVisualize
BU of 3puo by Molmil
Crystal structure of dihydrodipicolinate synthase from Pseudomonas aeruginosa(PsDHDPS)complexed with L-lysine at 2.65A resolution
分子名称: Dihydrodipicolinate synthase, GLYCEROL, LYSINE
著者Kaur, N, Kumar, M, Kumar, S, Gautam, A, Sinha, M, Kaur, P, Sharma, S, Sharma, R, Tewari, R, Singh, T.P.
登録日2010-12-06
公開日2010-12-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Biochemical studies and crystal structure determination of dihydrodipicolinate synthase from Pseudomonas aeruginosa
Int.J.Biol.Macromol., 48, 2011
3N2X
DownloadVisualize
BU of 3n2x by Molmil
Crystal structure of YagE, a prophage protein belonging to the dihydrodipicolinic acid synthase family from E. coli K12 in complex with pyruvate
分子名称: 1,2-ETHANEDIOL, Uncharacterized protein yagE
著者Bhaskar, V, Kumar, P.M, Manicka, S, Krishnaswamy, S.
登録日2010-05-19
公開日2011-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identification of biochemical and putative biological role of a xenolog from Escherichia coli using structural analysis.
Proteins, 79, 2011
6XNN
DownloadVisualize
BU of 6xnn by Molmil
Crystal Structure of Mouse STING CTD complex with SR-717.
分子名称: 4,5-difluoro-2-{[6-(1H-imidazol-1-yl)pyridazine-3-carbonyl]amino}benzoic acid, Stimulator of interferon genes protein
著者Chin, E.N, Yu, C, Wolan, D.W, Petrassi, H.M, Lairson, L.L.
登録日2020-07-03
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Antitumor activity of a systemic STING-activating non-nucleotide cGAMP mimetic.
Science, 369, 2020
6XNP
DownloadVisualize
BU of 6xnp by Molmil
Crystal Structure of Human STING CTD complex with SR-717
分子名称: 1,2-ETHANEDIOL, 4,5-difluoro-2-{[6-(1H-imidazol-1-yl)pyridazine-3-carbonyl]amino}benzoic acid, GLYCEROL, ...
著者Chin, E.N, Yu, C, Wolan, D.W, Petrassi, H.M, Lairson, L.L.
登録日2020-07-03
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Antitumor activity of a systemic STING-activating non-nucleotide cGAMP mimetic.
Science, 369, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon