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2YWB
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BU of 2ywb by Molmil
Crystal structure of GMP synthetase from Thermus thermophilus
分子名称: GMP synthase [glutamine-hydrolyzing]
著者Baba, S, Kanagawa, M, Yanai, H, Ishii, T, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YYT
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BU of 2yyt by Molmil
Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
分子名称: Orotidine 5'-phosphate decarboxylase
著者Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
2YZK
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BU of 2yzk by Molmil
Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
分子名称: Orotate phosphoribosyltransferase, PHOSPHATE ION
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
To be Published
2Z01
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BU of 2z01 by Molmil
Crystal structure of phosphoribosylaminoimidazole synthetase from Geobacillus kaustophilus
分子名称: Phosphoribosylformylglycinamidine cyclo-ligase
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus
J.Biochem., 2015
2Z00
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BU of 2z00 by Molmil
Crystal structure of dihydroorotase from Thermus thermophilus
分子名称: Dihydroorotase, ZINC ION
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of dihydroorotase from Thermus thermophilus
To be Published
2YZJ
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BU of 2yzj by Molmil
Crystal structure of dCTP deaminase from Sulfolobus tokodaii
分子名称: 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-DIPHOSPHATE, ...
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal structure of dCTP deaminase from Sulfolobus tokodaii
To be Published
2Z04
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BU of 2z04 by Molmil
Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus
分子名称: Phosphoribosylaminoimidazole carboxylase ATPase subunit, SULFATE ION
著者Okada, K, Tamura, S, Baba, S, Kanagawa, M, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus
To be Published
3ACD
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BU of 3acd by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with IMP from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase, INOSINIC ACID
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
2D19
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BU of 2d19 by Molmil
Solution RNA structure of loop region of the HIV-1 dimerization initiation site in the kissing-loop dimer
分子名称: 5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
著者Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2ZW2
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BU of 2zw2 by Molmil
Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS)
分子名称: GLYCEROL, Putative uncharacterized protein STS178
著者Suzuki, S, Tamura, S, Okada, K, Baba, S, Kumasaka, T, Nakagawa, N, Masui, R, Kuramitsu, S, Sampei, G, Kawai, G.
登録日2008-11-27
公開日2009-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS)
To be Published
2ZDC
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BU of 2zdc by Molmil
Crystal structure of dUTPase from Sulfolobus tokodaii
分子名称: 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION
著者Kanagawa, M, Baba S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-21
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of dUTPase from Sulfolobus tokodaii
To be Published
3AW8
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BU of 3aw8 by Molmil
Crystal structure of N5-carboxyaminoimidazole ribonucleotide synthetase from Thermus thermophilus HB8
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Phosphoribosylaminoimidazole carboxylase, ...
著者Okada, K, Tsunoda, S, Taka, H, Baba, S, Kanagawa, M, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-03-15
公開日2012-04-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of N5-carboxyaminoimidazole ribonucleotide synthetase, PurK, from thermophilic bacteria
To be Published
3ACC
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BU of 3acc by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase with GMP from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-MONOPHOSPHATE, Hypoxanthine-guanine phosphoribosyltransferase
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
3ACB
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BU of 3acb by Molmil
Crystal structure of hypoxanthine-guanine phosphoribosyltransferase from Thermus thermophilus HB8
分子名称: 1,4-DIETHYLENE DIOXIDE, Hypoxanthine-guanine phosphoribosyltransferase
著者Kanagawa, M, Baba, S, Hirotsu, K, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-12-30
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 66, 2010
3AX6
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BU of 3ax6 by Molmil
Crystal structure of N5-carboxyaminoimidazole ribonucleotide synthetase from Thermotoga maritima
分子名称: ADENOSINE-5'-DIPHOSPHATE, Phosphoribosylaminoimidazole carboxylase, ATPase subunit
著者Miyazawa, R, Kanagawa, M, Baba, S, Nakagawa, N, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-03-30
公開日2012-04-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of N5-carboxyaminoimidazole ribonucleotide synthetase, PurK, from thermophilic bacteria
To be Published
2YYU
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BU of 2yyu by Molmil
Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
分子名称: CYTIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
2Z02
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BU of 2z02 by Molmil
Crystal structure of phosphoribosylaminoimidazolesuccinocarboxamide synthase wit ATP from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, Phosphoribosylaminoimidazole-succinocarboxamide synthase, ...
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of phosphoribosylaminoimidazolesuccinocarboxamide synthase from Methanocaldococcus jannaschii
To be Published
2FDT
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BU of 2fdt by Molmil
Solution structure of a conserved RNA hairpin of eel LINE UnaL2
分子名称: 36-mer
著者Nomura, Y, Baba, S, Nakazato, S, Sakamoto, T, Kajikawa, M, Okada, N, Kawai, G.
登録日2005-12-14
公開日2006-12-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2
Nucleic Acids Res., 34, 2006
7DD4
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Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA
分子名称: RNA (36-MER)
著者Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G.
登録日2020-10-27
公開日2021-06-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Sci Rep, 11, 2021
7FGT
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BU of 7fgt by Molmil
Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
分子名称: DNA (5'-D(*AP*AP*GP*AP*AP*GP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*CP*TP*TP*CP*TP*T)-3'), ~{N}-[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]-1-methyl-4-[3-[[1-methyl-4-[[1-methyl-4-[3-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]propanoylamino]imidazole-2-carboxamide
著者Takase, N, Kawai, G, Igarashi, W, Katagiri, T.
登録日2021-07-28
公開日2022-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Discovery of DS15060524; Gene targeting chimera (GeneTAC) for the treatment of Friedreich's Ataxia (FRDA)
To be published
7EXY
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BU of 7exy by Molmil
T-hairpin structure found in the RNA element involved in the piRNA biogenesis
分子名称: RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3')
著者Takase, N, Kawai, G.
登録日2021-05-29
公開日2022-03-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献T-hairpin structure found in the RNA element involved in piRNA biogenesis.
Rna, 28, 2022
7FJ0
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BU of 7fj0 by Molmil
Interaction between a fluoroquinolone derivative and RNAs with a single bulge
分子名称: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*GP*AP*UP*CP*C)-3')
著者Nagano, K, Kamimura, T, Kawai, G.
登録日2021-08-02
公開日2021-12-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022
7FHI
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Interaction between a fluoroquinolone derivative and RNAs with a single bulge
分子名称: 1-cyclopropyl-N-[3-(dimethylamino)propyl]-7-(4-ethylpiperazin-1-yl)-6-fluoranyl-4-oxidanylidene-quinoline-3-carboxamide, RNA (5'-R(*GP*GP*AP*UP*GP*CP*UP*UP*AP*CP*UP*CP*AP*GP*CP*CP*AP*UP*CP*C)-3')
著者Nagano, K, Kamimura, T, Kawai, G.
登録日2021-07-29
公開日2021-12-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Interaction between a fluoroquinolone derivative and RNAs with a single bulge.
J.Biochem., 171, 2022
2F87
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Solution structure of a GAAG tetraloop in SRP RNA from Pyrococcus furiosus
分子名称: SRP RNA
著者Okada, K, Takahashi, M, Sakamoto, T, Nakamura, K, Kanai, A, Kawai, G
登録日2005-12-02
公開日2006-08-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of a GAAG tetraloop in helix 6 of SRP RNA from Pyrococcus furiosus
Nucleosides Nucleotides Nucleic Acids, 25, 2006
8Y6U
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Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Lin, W, Shi, J.
登録日2024-02-03
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献NMR analysis of a loop-bulge structure of UUCGA pentaloop.
Biochem.Biophys.Res.Commun., 691, 2024

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