Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2HVW
DownloadVisualize
BU of 2hvw by Molmil
Crystal structure of dCMP deaminase from Streptococcus mutans
分子名称: 1,4-DIETHYLENE DIOXIDE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 3,4-DIHYDRO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ...
著者Hou, H.F, Gao, Z.Q, Li, L.F, Liang, Y.H, Su, X.D, Dong, Y.H.
登録日2006-07-31
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal structures of Streptococcus mutans 2'-deoxycytidylate deaminase and its complex with substrate analog and allosteric regulator dCTP x Mg2+.
J.Mol.Biol., 377, 2008
4MMG
DownloadVisualize
BU of 4mmg by Molmil
crystal structure of YafQ mutant H87Q from E.coli
分子名称: SULFATE ION, mRNA interferase YafQ
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-09
公開日2014-06-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML2
DownloadVisualize
BU of 4ml2 by Molmil
Crystal structure of wild-type YafQ
分子名称: SULFATE ION, mRNA interferase YafQ
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-06
公開日2014-06-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML0
DownloadVisualize
BU of 4ml0 by Molmil
Crystal structure of E.coli DinJ-YafQ complex
分子名称: Predicted antitoxin of YafQ-DinJ toxin-antitoxin system, Predicted toxin of the YafQ-DinJ toxin-antitoxin system, SULFATE ION
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-06
公開日2014-06-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4NK4
DownloadVisualize
BU of 4nk4 by Molmil
Crystal structure of FabI from Candidatus Liberibacter asiaticus
分子名称: DI(HYDROXYETHYL)ETHER, Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Jiang, L, Gao, Z.Q, Dong, Y.H.
登録日2013-11-12
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
4NK5
DownloadVisualize
BU of 4nk5 by Molmil
Crystal structure of FabI-NAD complex from Candidatus Liberibacter asiaticus
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Jiang, L, Gao, Z.Q, Dong, Y.H.
登録日2013-11-12
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
8GOT
DownloadVisualize
BU of 8got by Molmil
Crystal structure of wild-type protease 3C from Seneca Valley Virus
分子名称: GLYCEROL, Peptidase C3, [(2~{S})-2-hexadecanoyloxy-3-[[(2~{R})-3-[[(2~{S})-3-[(5~{E},8~{E},11~{Z},14~{E})-icosa-5,8,11,14-tetraenoyl]oxy-2-[(9~{E},12~{Z})-octadeca-9,12-dienoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-propyl] icosanoate
著者Zhao, H.F, Zhang, H.
登録日2022-08-25
公開日2023-05-24
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献Allosteric regulation of Senecavirus A 3Cpro proteolytic activity by an endogenous phospholipid.
Plos Pathog., 19, 2023
8GPH
DownloadVisualize
BU of 8gph by Molmil
Crystal structure of protease 3C (C160A mutant) from Seneca Valley Virus
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Peptidase C3
著者Zhao, H.F, Zhang, H.
登録日2022-08-26
公開日2023-05-24
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.608 Å)
主引用文献Allosteric regulation of Senecavirus A 3Cpro proteolytic activity by an endogenous phospholipid.
Plos Pathog., 19, 2023
4JKZ
DownloadVisualize
BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
分子名称: Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
4JL3
DownloadVisualize
BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
分子名称: DNA (31-MER), Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
7ETR
DownloadVisualize
BU of 7etr by Molmil
Crystal structure of SO_1444-SO_1445 complex from Shewanella oneidensis
分子名称: Toxin module of toxin-antitoxin system RelE/StbE family, Transcriptional regulator CopG family
著者Zhou, J, Zhang, H.
登録日2021-05-13
公開日2022-03-23
実験手法X-RAY DIFFRACTION (3.804 Å)
主引用文献Insights into the Neutralization and DNA Binding of Toxin-Antitoxin System ParE SO-CopA SO by Structure-Function Studies.
Microorganisms, 9, 2021
5YEP
DownloadVisualize
BU of 5yep by Molmil
Crystal structure of SO_3166-SO_3165 from Shewanella oneidensis
分子名称: Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
著者Jia, X, Gao, Z.Q, Zhang, H, Dong, Y.H.
登録日2017-09-19
公開日2018-03-28
最終更新日2019-04-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-function analyses reveal the molecular architecture and neutralization mechanism of a bacterial HEPN-MNT toxin-antitoxin system.
J. Biol. Chem., 293, 2018
6JQ4
DownloadVisualize
BU of 6jq4 by Molmil
HIGA Escherichia coli-K12
分子名称: Antitoxin HigA
著者She, Z, Xu, B.S.
登録日2019-03-28
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational changes of antitoxin HigA from Escherichia coli str. K-12 upon binding of its cognate toxin HigB reveal a new regulation mechanism in toxin-antitoxin systems.
Biochem.Biophys.Res.Commun., 514, 2019
7X32
DownloadVisualize
BU of 7x32 by Molmil
Crystal structure of E. coli NfsB in complex with berberine
分子名称: BERBERINE, DIMETHYL SULFOXIDE, Dihydropteridine reductase, ...
著者Zhang, H, Wen, H.Y.
登録日2022-02-27
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.829 Å)
主引用文献Structural basis for the transformation of the traditional medicine berberine by bacterial nitroreductase.
Acta Crystallogr D Struct Biol, 78, 2022
<123

 

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon