Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5X0E
DownloadVisualize
BU of 5x0e by Molmil
Free serine kinase (E30A mutant) in complex with phosphoserine and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Free serine kinase, MAGNESIUM ION, ...
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5X0G
DownloadVisualize
BU of 5x0g by Molmil
Free serine kinase (E30A mutant) in complex with ADP
分子名称: 2-hydroxy-3-[4-(2-hydroxy-3-sulfopropyl)piperazin-1-yl]propane-1-sulfonic acid, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Nagata, R, Fujihashi, M, Miki, K.
登録日2017-01-20
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
3AQB
DownloadVisualize
BU of 3aqb by Molmil
M. luteus B-P 26 heterodimeric hexaprenyl diphosphate synthase in complex with magnesium
分子名称: CHLORIDE ION, Component A of hexaprenyl diphosphate synthase, Component B of hexaprenyl diphosphate synthase, ...
著者Sasaki, D, Fujihashi, M, Okuyama, N, Kobayashi, Y, Noike, M, Koyama, T, Miki, K.
登録日2010-10-28
公開日2010-11-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of heterodimeric hexaprenyl diphosphate synthase from Micrococcus luteus B-P 26 reveals that the small subunit is directly involved in the product chain length regulation.
J.Biol.Chem., 286, 2011
3AQC
DownloadVisualize
BU of 3aqc by Molmil
M. luteus B-P 26 heterodimeric hexaprenyl diphosphate synthase in complex with magnesium and FPP analogue
分子名称: (2E,6E)-7,11-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, CHLORIDE ION, Component A of hexaprenyl diphosphate synthase, ...
著者Sasaki, D, Fujihashi, M, Okuyama, N, Kobayashi, Y, Noike, M, Koyama, T, Miki, K.
登録日2010-10-28
公開日2010-11-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of heterodimeric hexaprenyl diphosphate synthase from Micrococcus luteus B-P 26 reveals that the small subunit is directly involved in the product chain length regulation.
J.Biol.Chem., 286, 2011
3VM6
DownloadVisualize
BU of 3vm6 by Molmil
Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1 in complex with alpha-D-ribose-1,5-bisphosphate
分子名称: 1,5-di-O-phosphono-alpha-D-ribofuranose, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Nakamura, A, Fujihashi, M, Aono, R, Sato, T, Nishiba, Y, Yoshida, S, Yano, A, Atomi, H, Imanaka, T, Miki, K.
登録日2011-12-08
公開日2012-04-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
3ATQ
DownloadVisualize
BU of 3atq by Molmil
Geranylgeranyl Reductase (GGR) from Sulfolobus acidocaldarius
分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, TETRADECANE
著者Sasaki, D, Fujihashi, M, Murakami, M, Yoshimura, T, Hemmi, H, Miki, K.
登録日2011-01-12
公開日2011-05-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and mutation analysis of archaeal geranylgeranyl reductase
J.Mol.Biol., 409, 2011
3A11
DownloadVisualize
BU of 3a11 by Molmil
Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakaraensis KOD1
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Translation initiation factor eIF-2B, ...
著者Nakamura, A, Fujihashi, M, Nishiba, Y, Yoshida, S, Yano, A, Atomi, H, Imanaka, T, Miki, K.
登録日2009-03-25
公開日2010-03-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
3A12
DownloadVisualize
BU of 3a12 by Molmil
Crystal structure of Type III Rubisco complexed with 2-CABP
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日2009-03-25
公開日2010-04-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
3A13
DownloadVisualize
BU of 3a13 by Molmil
Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP and activated with Ca
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
著者Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日2009-03-25
公開日2010-04-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structure-based optimization of a Type III Rubisco from a hyperthermophile
To be Published
3A9C
DownloadVisualize
BU of 3a9c by Molmil
Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakaraensis KOD1 in complex with ribulose-1,5-bisphosphate
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, RIBULOSE-1,5-DIPHOSPHATE, ...
著者Nakamura, A, Fujihashi, M, Nishiba, Y, Yoshida, S, Yano, A, Atomi, H, Imanaka, T, Miki, K.
登録日2009-10-22
公開日2010-11-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
2Z6W
DownloadVisualize
BU of 2z6w by Molmil
Crystal structure of human cyclophilin D in complex with cyclosporin A
分子名称: CITRIC ACID, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
著者Kajitani, K, Fujihashi, M, Kobayashi, Y, Shimizu, S, Tsujimoto, Y, Miki, K.
登録日2007-08-09
公開日2008-04-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Crystal Structure of Human Cyclophilin D in Complex with its Inhibitor, Cyclosporin a at 0.96-A Resolution.
Proteins, 70, 2008
9JU4
DownloadVisualize
BU of 9ju4 by Molmil
Crystal structure of the Thermotoga maritima cold shock protein mutant Est#13 in complex with AacEst
分子名称: Alpha/beta hydrolase fold-3 domain protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Tanaka, S.-i, Amesaka, H.
登録日2024-10-07
公開日2025-01-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Heat-sterilizable antibody mimics designed on the cold shock protein scaffold from hyperthermophile Thermotoga maritima.
Protein Sci., 34, 2025
2F6U
DownloadVisualize
BU of 2f6u by Molmil
Crystal Structure of (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase complexed with citrate
分子名称: (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase, CITRIC ACID
著者Payandeh, J.
登録日2005-11-29
公開日2006-01-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The crystal structure of (S)-3-O-geranylgeranylglyceryl phosphate synthase reveals an ancient fold for an ancient enzyme
J.Biol.Chem., 281, 2006
2F6X
DownloadVisualize
BU of 2f6x by Molmil
Crystal Structure of (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase complexed with sn-G1P and MPD
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase, SN-GLYCEROL-1-PHOSPHATE
著者Payandeh, J.M.
登録日2005-11-29
公開日2006-01-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of (S)-3-O-geranylgeranylglyceryl phosphate synthase reveals an ancient fold for an ancient enzyme
J.Biol.Chem., 281, 2006
2ZQM
DownloadVisualize
BU of 2zqm by Molmil
Crystal structure of the prefoldin beta subunit from Thermococcus strain KS-1
分子名称: CITRIC ACID, GLYCEROL, Prefoldin beta subunit 1
著者Kida, H, Miki, K.
登録日2008-08-13
公開日2008-08-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and molecular characterization of the prefoldin beta subunit from Thermococcus strain KS-1
J.Mol.Biol., 383, 2008
<123

 

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon