Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5MOP
DownloadVisualize
BU of 5mop by Molmil
Joint X-ray/neutron structure of cationic trypsin in its apo form
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-14
公開日2018-01-17
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (0.99 Å), X-RAY DIFFRACTION
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MNF
DownloadVisualize
BU of 5mnf by Molmil
Cationic trypsin in its apo form (deuterated sample at 295 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
7APM
DownloadVisualize
BU of 7apm by Molmil
tRNA-guanine transglycosylase H319C mutant spin-labeled with MTSL.
分子名称: CHLORIDE ION, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
著者Nguyen, D, Heine, A, Klebe, G.
登録日2020-10-18
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Unraveling a Ligand-Induced Twist of a Homodimeric Enzyme by Pulsed Electron-Electron Double Resonance.
Angew.Chem.Int.Ed.Engl., 60, 2021
5MNE
DownloadVisualize
BU of 5mne by Molmil
Cationic trypsin in its apo form (deuterated sample at 100 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.008 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MNN
DownloadVisualize
BU of 5mnn by Molmil
Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.859 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MNQ
DownloadVisualize
BU of 5mnq by Molmil
Cationic trypsin in complex with a derivative of N-amidinopiperidine
分子名称: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(1-carbamimidoylpiperidin-4-yl)methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Ngo, K, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.337 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MO0
DownloadVisualize
BU of 5mo0 by Molmil
Neutron structure of cationic trypsin in complex with benzamidine
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-02-28
最終更新日2024-01-17
実験手法NEUTRON DIFFRACTION (1.502 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MO2
DownloadVisualize
BU of 5mo2 by Molmil
Neutron structure of cationic trypsin in complex with N-amidinopiperidine
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-02-28
最終更新日2024-01-17
実験手法NEUTRON DIFFRACTION (1.5 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
7APL
DownloadVisualize
BU of 7apl by Molmil
tRNA-guanine transglycosylase G87C mutant spin-labeled with MTSL
分子名称: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION
著者Nguyen, D, Heine, A, Klebe, G.
登録日2020-10-18
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Unraveling a Ligand-Induced Twist of a Homodimeric Enzyme by Pulsed Electron-Electron Double Resonance.
Angew.Chem.Int.Ed.Engl., 60, 2021
6RON
DownloadVisualize
BU of 6ron by Molmil
Endothiapepsin in complex with compound 046
分子名称: DIMETHYL SULFOXIDE, Endothiapepsin, GLYCEROL, ...
著者Magari, F, Heine, A, Klebe, G.
登録日2019-05-13
公開日2020-07-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Endothiapepsin in complex with compound 046
To Be Published
6SCV
DownloadVisualize
BU of 6scv by Molmil
Endothiapepsin in complex with ligand 69
分子名称: Endothiapepsin, GLYCEROL, [(~{R})-cyclohexyl-[1-(2-phenylethyl)-1,2,3,4-tetrazol-5-yl]methyl]diazane
著者Magari, F, Heine, A, Klebe, G.
登録日2019-07-25
公開日2020-08-26
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Endothiapepsin in complex with ligand 69
To Be Published
6YSJ
DownloadVisualize
BU of 6ysj by Molmil
Thrombin in complex with 2-amino-1-(4-bromophenyl)ethan-1-one (j10)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-1-(4-bromophenyl)ethanone, DIMETHYL SULFOXIDE, ...
著者Scanlan, W, Heine, A, Klebe, G, Abazi, N, Paulus, A.
登録日2020-04-22
公開日2021-05-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Thrombin in complex with 2-amino-1-(4-bromophenyl)ethan-1-one (j10)
To be published
5LCE
DownloadVisualize
BU of 5lce by Molmil
Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(5-chloro-2-(hydroxymethyl)benzy l)pyrrolidine-2-carboxamide
分子名称: (2~{S})-1-[(2~{R})-2-azanyl-3-cyclohexyl-propanoyl]-~{N}-[[5-chloranyl-2-(hydroxymethyl)phenyl]methyl]pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Sandner, A, Heine, A, Klebe, G.
登録日2016-06-21
公開日2017-07-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding.
J.Med.Chem., 62, 2019
5LPD
DownloadVisualize
BU of 5lpd by Molmil
Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(2-(aminomethyl)-5-chlorobenzyl) pyrrolidine-2-carboxamide
分子名称: (2~{S})-~{N}-[[2-(aminomethyl)-5-chloranyl-phenyl]methyl]-1-[(2~{R})-2-azanyl-3-cyclohexyl-propanoyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Sandner, A, Heine, A, Klebe, G.
登録日2016-08-12
公開日2017-07-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding.
J.Med.Chem., 62, 2019
4YU1
DownloadVisualize
BU of 4yu1 by Molmil
Human Aldose Reductase complexed with Schl12134 (3-[5-(3-nitrophenyl)-2-thienyl]propanoic acid) at 1.02 A
分子名称: 3-[5-(3-nitrophenyl)thiophen-2-yl]propanoic acid, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Rechlin, C, Heine, A, Klebe, G.
登録日2015-03-18
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Keys to open the specificity pocket: Biphenylic Inhibitors of the human aldose reductase
To Be Published
5MZL
DownloadVisualize
BU of 5mzl by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule N-quinolin-5-ylpyridine-3-carboxamide
分子名称: GLYCEROL, Pimtide, Serine/threonine-protein kinase pim-1, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-01
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献A crystallographic fragment study with human Pim-1 kinase
to be published
5N4O
DownloadVisualize
BU of 5n4o by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule (E)-3-(p-tolyl)acrylic acid
分子名称: (~{E})-3-(4-methylphenyl)prop-2-enoic acid, Pimtide, Serine/threonine-protein kinase pim-1
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-11
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献A crystallographic fragment study with human Pim-1 kinase
to be published
5N4U
DownloadVisualize
BU of 5n4u by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule 5-(2-amino-1,3-thiazol-4-yl)-1,3-dihydrobenzimidazol-2-one
分子名称: 5-(2-azanyl-1,3-thiazol-4-yl)-1,3-dihydrobenzimidazol-2-one, Pimtide, Serine/threonine-protein kinase pim-1
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-11
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献A crystallographic fragment study with human Pim-1 kinase
to be published
5MO1
DownloadVisualize
BU of 5mo1 by Molmil
Neutron structure of cationic trypsin in complex with benzylamine
分子名称: (phenylmethyl)azanium, CALCIUM ION, Cationic trypsin
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-02-28
最終更新日2024-01-17
実験手法NEUTRON DIFFRACTION (1.491 Å)
主引用文献Neutron structure of cationic trypsin in complex with benzylamine
to be published
5MOR
DownloadVisualize
BU of 5mor by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with benzylamine
分子名称: (phenylmethyl)azanium, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-14
公開日2018-02-28
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (0.98 Å), X-RAY DIFFRACTION
主引用文献Joint X-ray/neutron structure of cationic trypsin in complex with benzylamine
to be published
6Y8C
DownloadVisualize
BU of 6y8c by Molmil
Crystal structure of the cAMP-dependent protein kinase A cocrystallized with ATP and PKI (5-24)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, DIMETHYL SULFOXIDE, ...
著者Oebbeke, M, Heine, A, Klebe, G.
登録日2020-03-04
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献A crystallographic study of cAMP-dependent protein kinase A in complex with different Fasudil-derivatives
To Be Published
6YNC
DownloadVisualize
BU of 6ync by Molmil
Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with the methylated Fasudil-derived fragment N-methylisoquinoline-5-sulfonamide (soaked)
分子名称: cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha, ~{N}-methylisoquinoline-5-sulfonamide
著者Oebbeke, M, Wienen-Schmidt, B, Heine, A, Klebe, G.
登録日2020-04-13
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021
6YQI
DownloadVisualize
BU of 6yqi by Molmil
Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with long-chain Fasudil-derivative N-[2-(propylamino)ethyl]isoquinoline-5-sulfonamide (soaked)
分子名称: cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha, ~{N}-[2-(propylamino)ethyl]isoquinoline-5-sulfonamide
著者Oebbeke, M, Wienen-Schmidt, B, Heine, A, Klebe, G.
登録日2020-04-17
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021
6YIY
DownloadVisualize
BU of 6yiy by Molmil
Trypsin inhibitor in complex with bovine trypsin
分子名称: 1H-isoindol-3-amine, CALCIUM ION, Cationic trypsin, ...
著者Badran, M.J, Heine, A, Klebe, G.
登録日2020-04-01
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Trypsin inhibitor in complex with bovine trypsin
To Be Published
6YNR
DownloadVisualize
BU of 6ynr by Molmil
Crystal structure of the cAMP-dependent protein kinase A in complex with 1,7-Naphthyridin-8-amine (soaked) and PKI (5-24)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,7-naphthyridin-8-amine, DIMETHYL SULFOXIDE, ...
著者Oebbeke, M, Heine, A, Klebe, G.
登録日2020-04-14
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon