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2GZY
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BU of 2gzy by Molmil
solution structures of the reduced form of thioredoxin from Bacillus subtilis
分子名称: Thioredoxin
著者Xu, H, Zhang, X, Chen, J, Jin, C.
登録日2006-05-12
公開日2007-02-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis.
J.Biol.Chem., 282, 2007
1V92
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BU of 1v92 by Molmil
Solution structure of the UBA domain from p47, a major cofactor of the AAA ATPase p97
分子名称: NSFL1 cofactor p47
著者Yuan, X, Simpson, P, Mckeown, C, Kondo, H, Uchiyama, K, Wallis, R, Dreveny, I, Keetch, C, Zhang, X, Robinson, C, Freemont, P, Matthews, S.
登録日2004-01-19
公開日2004-04-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure, dynamics and interactions of p47, a major adaptor of the AAA ATPase, p97
Embo J., 23, 2004
2H3D
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BU of 2h3d by Molmil
Crystal Structure of Mouse Nicotinamide Phosphoribosyltransferase/Visfatin/Pre-B Cell Colony Enhancing Factor in Complex with Nicotinamide Mononuleotide
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide phosphoribosyltransferase
著者Wang, T, Zhang, X, Bheda, P, Revollo, J.R, Imai, S.I, Wolberger, C.
登録日2006-05-22
公開日2006-06-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Nampt/PBEF/visfatin, a mammalian NAD(+) biosynthetic enzyme.
Nat.Struct.Mol.Biol., 13, 2006
4EVV
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BU of 4evv by Molmil
mouse MBD4 glycosylase domain in complex with a G:T mismatch
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*TP*GP*TP*GP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'), ...
著者Hashimoto, H, Zhang, X, Cheng, X.
登録日2012-04-26
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation.
Nucleic Acids Res., 40, 2012
1G55
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BU of 1g55 by Molmil
Structure of human DNMT2, an enigmatic DNA methyltransferase homologue
分子名称: BETA-MERCAPTOETHANOL, DNA CYTOSINE METHYLTRANSFERASE DNMT2, GLYCEROL, ...
著者Dong, A, Yoder, J.A, Zhang, X, Zhou, L, Bestor, T.H, Cheng, X.
登録日2000-10-30
公開日2001-01-17
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA.
Nucleic Acids Res., 29, 2001
4AU6
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BU of 4au6 by Molmil
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
分子名称: RNA-DEPENDENT RNA POLYMERASE
著者Estrozi, L.F, Settembre, E.C, Goret, G, McClain, B, Zhang, X, Chen, J.Z, Grigorieff, N, Harrison, S.C.
登録日2012-05-14
公開日2012-06-13
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Location of the Dsrna-Dependent Polymerase, Vp1, in Rotavirus Particles.
J.Mol.Biol., 425, 2013
2GZZ
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BU of 2gzz by Molmil
solution structures of the oxidized form of thioredoxin from Bacillus subtilis
分子名称: thioredoxin
著者Xu, H, Zhang, X, Chen, J, Jin, C.
登録日2006-05-12
公開日2007-02-13
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis.
J.Biol.Chem., 282, 2007
4EW4
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BU of 4ew4 by Molmil
mouse MBD4 glycosylase domain in complex with DNA containing a ribose sugar
分子名称: DNA (5'-D(*CP*CP*AP*TP*GP*(3DR)P*GP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4, ...
著者Hashimoto, H, Zhang, X, Cheng, X.
登録日2012-04-26
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.791 Å)
主引用文献Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation.
Nucleic Acids Res., 40, 2012
4F0P
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BU of 4f0p by Molmil
MspJI Restriction Endonuclease - P31 Form
分子名称: MAGNESIUM ION, Restriction endonuclease
著者Horton, J.R, Mabuchi, M, Cohen-Karni, D, Zhang, X, Griggs, R, Samaranayake, M, Roberts, R.J, Zheng, Y, Cheng, X.
登録日2012-05-04
公開日2012-08-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.
Nucleic Acids Res., 40, 2012
4F0Q
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BU of 4f0q by Molmil
MspJI Restriction Endonuclease - P21 Form
分子名称: MAGNESIUM ION, Restriction endonuclease
著者Horton, J.R, Mabuchi, M, Cohen-Karni, D, Zhang, X, Griggs, R, Samaranayake, M, Roberts, R.J, Zheng, Y, Cheng, X.
登録日2012-05-04
公開日2012-08-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.046 Å)
主引用文献Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.
Nucleic Acids Res., 40, 2012
3EU9
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BU of 3eu9 by Molmil
The ankyrin repeat domain of Huntingtin interacting protein 14
分子名称: GLYCEROL, HISTIDINE, Huntingtin-interacting protein 14, ...
著者Gao, T, Collins, R.E, Horton, J.R, Zhang, R, Zhang, X, Cheng, X.
登録日2008-10-09
公開日2009-06-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The ankyrin repeat domain of Huntingtin interacting protein 14 contains a surface aromatic cage, a potential site for methyl-lysine binding.
Proteins, 76, 2009
2K2V
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BU of 2k2v by Molmil
Anabaena CcbP in the calcium-bound form
分子名称: Alr1010 protein, CALCIUM ION
著者Hu, Y, Zhang, X, Jin, C.
登録日2008-04-13
公開日2009-04-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Anabaena CcbP in the calcium-bound form
To be Published
2L37
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BU of 2l37 by Molmil
3D solution structure of arginine/glutamate-rich polypeptide Luffin P1 from the seeds of sponge gourd (Luffa cylindrical)
分子名称: Ribosome-inactivating protein luffin P1
著者Ng, Y.M, Yang, Y, Sze, K.H, Zhang, X, Zheng, Y.T, Shaw, P.C.
登録日2010-09-08
公開日2011-01-19
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structural characterization and anti-HIV-1 activities of arginine/glutamate-rich polypeptide Luffin P1 from the seeds of sponge gourd (Luffa cylindrical).
J.Struct.Biol., 2010
3PU8
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BU of 3pu8 by Molmil
PHF2 Jumonji-NOG-Fe(II) complex
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.943 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
3EA3
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BU of 3ea3 by Molmil
Crystal Structure of the Y246S/Y247S/Y248S/Y251S Mutant of Phosphatidylinositol-Specific Phospholipase C from Bacillus Thuringiensis
分子名称: 1-phosphatidylinositol phosphodiesterase, MANGANESE (II) ION
著者Shi, X, Shao, C, Zhang, X, Zambonelli, C, Redfied, A.G, Head, J.F, Seaton, B.A, Roberts, M.F.
登録日2008-08-24
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Modulation of Bacillus thuringiensis Phosphatidylinositol-specific Phospholipase C Activity by Mutations in the Putative Dimerization Interface.
J.Biol.Chem., 284, 2009
3PTR
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BU of 3ptr by Molmil
PHF2 Jumonji domain
分子名称: 1,2-ETHANEDIOL, PHD finger protein 2
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
3PUA
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BU of 3pua by Molmil
PHF2 Jumonji-NOG-Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
6A6B
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BU of 6a6b by Molmil
cryo-em structure of alpha-synuclein fiber
分子名称: Alpha-synuclein
著者Li, Y.W, Zhao, C.Y, Luo, F, Liu, Z, Gui, X, Luo, Z, Zhang, X, Li, D, Liu, C, Li, X.
登録日2018-06-27
公開日2018-07-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Amyloid fibril structure of alpha-synuclein determined by cryo-electron microscopy
Cell Res., 28, 2018
3LQ9
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BU of 3lq9 by Molmil
Crystal structure of human REDD1, a hypoxia-induced regulator of mTOR
分子名称: DNA-damage-inducible transcript 4 protein
著者Vega-Rubin-de-Celis, S, Abdallah, Z, Brugarolas, J, Zhang, X.
登録日2010-02-08
公開日2010-03-09
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis and functional implications of the negative mTORC1 regulator REDD1.
Biochemistry, 49, 2010
1WE1
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BU of 1we1 by Molmil
Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC6803 in complex with heme
分子名称: CHLORIDE ION, Heme oxygenase 1, ISOPROPYL ALCOHOL, ...
著者Sugishima, M, Migita, C.T, Zhang, X, Yoshida, T, Fukuyama, K.
登録日2004-05-21
公開日2004-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC 6803 in complex with heme
Eur.J.Biochem., 271, 2004
6A96
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BU of 6a96 by Molmil
Cryo-EM structure of the human alpha5beta3 GABAA receptor in complex with GABA and Nb25
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid receptor subunit alpha-5,Gamma-aminobutyric acid receptor subunit alpha-5, ...
著者Liu, S, Xu, L, Guan, F, Liu, Y.T, Cui, Y, Zhang, Q, Bi, G.Q, Zhou, Z.H, Zhang, X, Ye, S.
登録日2018-07-11
公開日2018-10-03
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Cryo-EM structure of the human alpha 5 beta 3 GABAAreceptor.
Cell Res., 28, 2018
2UXP
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BU of 2uxp by Molmil
TtgR in complex Chloramphenicol
分子名称: CHLORAMPHENICOL, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-29
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
2UXH
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TtgR in complex with Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-28
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
2W5R
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Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
分子名称: (2R)-2,3-dihydroxypropyl phosphate, ACETATE ION, MANGANESE (II) ION, ...
著者Lu, D, Wormann, M.E, Zhang, X, Schneewind, O, Grundling, A, Freemont, P.S.
登録日2008-12-11
公開日2009-02-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
2W5S
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BU of 2w5s by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
分子名称: (2R)-2,3-dihydroxypropyl phosphate, ACETATE ION, MANGANESE (II) ION, ...
著者Lu, D, Wormann, M.E, Zhang, X, Schneewind, O, Grundling, A, Freemont, P.S.
登録日2008-12-11
公開日2009-02-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009

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