Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6QV7
DownloadVisualize
BU of 6qv7 by Molmil
Crystal structure of a CHAD domain from Chlorobium tepidum
分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, SULFATE ION, ...
著者Lorenzo-Orts, L, Hothorn, M.
登録日2019-03-01
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules.
Life Sci Alliance, 2, 2019
6QVA
DownloadVisualize
BU of 6qva by Molmil
Crystal structure of a CHAD domain from Chlorobium tepidum in complex with inorganic polyphosphate
分子名称: 1,2-ETHANEDIOL, CHAD domain, PHOSPHATE ION, ...
著者Lorenzo-Orts, L, Hothorn, M.
登録日2019-03-01
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules.
Life Sci Alliance, 2, 2019
3ZKE
DownloadVisualize
BU of 3zke by Molmil
Structure of LC8 in complex with Nek9 peptide
分子名称: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC, NEK9 PROTEIN
著者Gallego, P, Velazquez-Campoy, A, Regue, L, Roig, J, Reverter, D.
登録日2013-01-22
公開日2013-03-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of the Regulation of the Dynll/Lc8 Binding to Nek9 by Phosphorylation
J.Biol.Chem., 288, 2013
8F46
DownloadVisualize
BU of 8f46 by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with a dimethyl phenyl sulfane inhibitor (cyano warhead)
分子名称: 3C-like proteinase, N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-{[2-methyl-2-(phenylsulfanyl)propoxy]carbonyl}-L-leucinamide, TETRAETHYLENE GLYCOL
著者Liu, L, Lovell, S, Cooper, A, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
登録日2022-11-10
公開日2022-11-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-guided design of direct-acting antivirals that exploit the gem-dimethyl effect and potently inhibit 3CL proteases of severe acute respiratory syndrome Coronavirus-2 (SARS-CoV-2) and middle east respiratory syndrome coronavirus (MERS-CoV).
Eur.J.Med.Chem., 254, 2023
8F44
DownloadVisualize
BU of 8f44 by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with a dimethyl phenyl sulfane inhibitor
分子名称: (1R,2S)-1-hydroxy-2-[(N-{[2-methyl-2-(phenylsulfanyl)propoxy]carbonyl}-L-leucyl)amino]-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (2-methyl-2-phenylsulfanyl-propyl) ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate, 3C-like proteinase, ...
著者Liu, L, Lovell, S, Cooper, A, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
登録日2022-11-10
公開日2022-11-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure-guided design of direct-acting antivirals that exploit the gem-dimethyl effect and potently inhibit 3CL proteases of severe acute respiratory syndrome Coronavirus-2 (SARS-CoV-2) and middle east respiratory syndrome coronavirus (MERS-CoV).
Eur.J.Med.Chem., 254, 2023
3ZX7
DownloadVisualize
BU of 3zx7 by Molmil
Complex of lysenin with phosphocholine
分子名称: LYSENIN, PHOSPHATE ION, PHOSPHOCHOLINE, ...
著者De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
登録日2011-08-08
公開日2012-09-19
最終更新日2012-10-03
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
8EYZ
DownloadVisualize
BU of 8eyz by Molmil
Engineered glutamine binding protein bound to GLN and a cobaloxime ligand
分子名称: AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT, Amino acid ABC transporter substrate-binding protein, GLUTAMINE, ...
著者Bridwell-Rabb, J, Boggs, D.G, Olshansky, L, Fatima, S, Thompson, P.
登録日2022-10-29
公開日2022-11-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Engineering a Conformationally Switchable Artificial Metalloprotein.
J.Am.Chem.Soc., 144, 2022
4B82
DownloadVisualize
BU of 4b82 by Molmil
Mus musculus Acetylcholinesterase in complex with N-(2-Diethylamino- ethyl)-2-fluoranyl-benzenesulfonamide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, DI(HYDROXYETHYL)ETHER, ...
著者Andersson, C.D, Forsgren, N, Akfur, C, Allgardsson, A, Berg, L, Qian, W, Ekstrom, F, Linusson, A.
登録日2012-08-24
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors.
J.Med.Chem., 56, 2013
6QWU
DownloadVisualize
BU of 6qwu by Molmil
4'-phosphopantetheinyl transferase PptAb from Mycobacterium abscessus at pH 5.5 with Mn2+ and CoA.
分子名称: COENZYME A, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Nguyen, M.C, Mourey, L, Pedelacq, J.D.
登録日2019-03-06
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational flexibility of coenzyme A and its impact on the post-translational modification of acyl carrier proteins by 4'-phosphopantetheinyl transferases.
Febs J., 287, 2020
8F8O
DownloadVisualize
BU of 8f8o by Molmil
Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, CITRIC ACID, SUCCINIC ACID, ...
著者Minasov, G, Shuvalova, L, Brunzelle, J.S, Dubrovska, I, Pshenychnyi, S, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-11-22
公開日2022-11-30
最終更新日2023-02-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
To Be Published
6QYI
DownloadVisualize
BU of 6qyi by Molmil
Structure of HPAB from E.coli in complex with FAD
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxyphenylacetate 3-monooxygenase oxygenase component, DI(HYDROXYETHYL)ETHER, ...
著者Pecqueur, L, Lombard, M, Deng, Y, Fontecave, M.
登録日2019-03-09
公開日2019-06-12
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Characterization of 4-Hydroxyphenylacetate 3-Hydroxylase from Escherichia coli.
Chembiochem, 21, 2020
6QLZ
DownloadVisualize
BU of 6qlz by Molmil
IDOL F3ab subdomain
分子名称: E3 ubiquitin-protein ligase MYLIP
著者Martinelli, L, Johansson, P, Wan, P.T, Gunnarsson, J, Guo, H, Boyd, H.
登録日2019-02-01
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.343 Å)
主引用文献Structural analysis of the LDL receptor-interacting FERM domain in the E3 ubiquitin ligase IDOL reveals an obscured substrate-binding site.
J.Biol.Chem., 295, 2020
6QM5
DownloadVisualize
BU of 6qm5 by Molmil
Cryo-EM structure of calcium-bound nhTMEM16 lipid scramblase in DDM
分子名称: CALCIUM ION, Predicted protein
著者Kalienkova, V, Clerico Mosina, V, Bryner, L, Oostergetel, G.T, Dutzler, R, Paulino, C.
登録日2019-02-01
公開日2019-03-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Stepwise activation mechanism of the scramblase nhTMEM16 revealed by cryo-EM.
Elife, 8, 2019
6QXQ
DownloadVisualize
BU of 6qxq by Molmil
4'-phosphopantetheinyl transferase PptAb from Mycobacterium abscessus at pH 7 with Mn2+ and CoA.
分子名称: COENZYME A, MANGANESE (II) ION, Possible 4'-phosphopantetheinyl transferase
著者Nguyen, M.C, Mourey, L, Pedelacq, J.D.
登録日2019-03-07
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Conformational flexibility of coenzyme A and its impact on the post-translational modification of acyl carrier proteins by 4'-phosphopantetheinyl transferases.
Febs J., 287, 2020
4BBK
DownloadVisualize
BU of 4bbk by Molmil
Structural and functional characterisation of the kindlin-1 pleckstrin homology domain
分子名称: FERMITIN FAMILY HOMOLOG 1, GLYCEROL
著者Yates, L.A, Lumb, C.N, Brahme, N.N, Zalyte, R, Bird, L.E, De Colibus, L, Owens, R.J, Calderwood, D.A, Sansom, M.S.P, Gilbert, R.J.C.
登録日2012-09-25
公開日2012-11-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Functional Characterisation of the Kindlin-1 Pleckstrin Homology Domain
J.Biol.Chem., 287, 2012
4BDS
DownloadVisualize
BU of 4bds by Molmil
Human butyrylcholinesterase in complex with tacrine
分子名称: 1-formyl-L-proline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nachon, F, Carletti, E, Ronco, C, Trovaslet, M, Nicolet, Y, Jean, L, Renard, P.-Y.
登録日2012-10-06
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Human Cholinesterases in Complex with Huprine W and Tacrine: Elements of Specificity for Anti-Alzheimer'S Drugs Targeting Acetyl- and Butyrylcholinesterase.
Biochem.J., 453, 2013
4B81
DownloadVisualize
BU of 4b81 by Molmil
Mus musculus Acetylcholinesterase in complex with 1-(4-Chloro-phenyl)- N-(2-diethylamino-ethyl)-methanesulfonamide
分子名称: 1-(4-chlorophenyl)-N-[2-(diethylamino)ethyl]methanesulfonamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
著者Andersson, C.D, Forsgren, N, Akfur, C, Allgardsson, A, Berg, L, Qian, W, Ekstrom, F, Linusson, A.
登録日2012-08-24
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors.
J.Med.Chem., 56, 2013
4B4C
DownloadVisualize
BU of 4b4c by Molmil
Crystal structure of the DNA-binding domain of human CHD1.
分子名称: 1,2-ETHANEDIOL, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, GLYCEROL, ...
著者Allerston, C.K, Cooper, C.D.O, Shrestha, L, Vollmar, M, Burgess-Brown, N, Yue, W.W, Carpenter, E.P, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Gileadi, O.
登録日2012-07-30
公開日2012-08-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal Structure of the DNA-Binding Domain of Human Chd1.
To be Published
4AYG
DownloadVisualize
BU of 4ayg by Molmil
Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in orthorhombic apo-form
分子名称: ACETIC ACID, CALCIUM ION, GLUCANSUCRASE, ...
著者Pijning, T, Vujicic-Zagar, A, Kralj, S, Dijkhuizen, L, Dijkstra, B.W.
登録日2012-06-21
公開日2013-07-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Flexibility of Truncated and Full-Length Glucansucrase Gtf180 Enzymes from Lactobacillus Reuteri 180.
FEBS J., 281, 2014
6QPP
DownloadVisualize
BU of 6qpp by Molmil
Rhizomucor miehei lipase propeptide complex, native
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase
著者Moroz, O.V, Blagova, E, Reiser, V, Saikia, R, Dalal, S, Jorgensen, C.I, Baunsgaard, L, Andersen, B, Svendsen, A, Wilson, K.S.
登録日2019-02-14
公開日2019-03-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Novel Inhibitory Function of theRhizomucor mieheiLipase Propeptide and Three-Dimensional Structures of Its Complexes with the Enzyme.
Acs Omega, 4, 2019
6QPR
DownloadVisualize
BU of 6qpr by Molmil
Rhizomucor miehei lipase propeptide complex, Ser95/Ile96 deletion mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase
著者Moroz, O.V, Blagova, E, Reiser, V, Saikia, R, Dalal, S, Jorgensen, C.I, Baunsgaard, L, Andersen, B, Svendsen, A, Wilson, K.S.
登録日2019-02-14
公開日2019-03-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Novel Inhibitory Function of theRhizomucor mieheiLipase Propeptide and Three-Dimensional Structures of Its Complexes with the Enzyme.
Acs Omega, 4, 2019
6QQ4
DownloadVisualize
BU of 6qq4 by Molmil
Odorant-binding protein dmelOBP28a from Drosophila melanogaster
分子名称: General odorant-binding protein 28a, MALONIC ACID, PENTAETHYLENE GLYCOL
著者Gonzalez, D, Neiers, F, Gotthard, G, Briand, L.
登録日2019-02-17
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献The Drosophila odorant-binding protein 28a is involved in the detection of the floral odour ss-ionone.
Cell.Mol.Life Sci., 77, 2020
6QVO
DownloadVisualize
BU of 6qvo by Molmil
Crystal structure of human MTH1 in complex with N6-methyl-dAMP
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, GLYCEROL, N6-METHYL-DEOXY-ADENOSINE-5'-MONOPHOSPHATE, ...
著者Scaletti, E, Vallin, K.S, Brautigam, L, Sarno, A, Warpman Berglund, U, Helleday, T, Stenmark, P, Jemth, A.S.
登録日2019-03-04
公開日2020-03-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献MutT homologue 1 (MTH1) removes N6-methyl-dATP from the dNTP pool.
J.Biol.Chem., 295, 2020
4BEC
DownloadVisualize
BU of 4bec by Molmil
MUTANT (K220A) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, TYPE I RESTRICTION ENZYME HSDR
著者Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
登録日2013-03-07
公開日2014-03-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
4B84
DownloadVisualize
BU of 4b84 by Molmil
Mus musculus Acetylcholinesterase in complex with N-(2-Diethylamino- ethyl)-3-trifluoromethyl-benzenesulfonamide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15-PENTAOXAHEPTADECANE, ACETYLCHOLINESTERASE, ...
著者Andersson, C.D, Forsgren, N, Akfur, C, Allgardsson, A, Berg, L, Qian, W, Ekstrom, F, Linusson, A.
登録日2012-08-24
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Divergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors.
J.Med.Chem., 56, 2013

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon