9JER
| Arginine decarboxylase in Aspergillus oryzae, ligand-free form | 分子名称: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-tryptophan decarboxylase PsiD-like domain-containing protein | 著者 | Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y. | 登録日 | 2024-09-03 | 公開日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis. Biochem.Biophys.Res.Commun., 733, 2024
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9JFN
| Arginine decarboxylase in Aspergillus oryzae complexed with agmatine | 分子名称: | 1,2-ETHANEDIOL, AGMATINE, DI(HYDROXYETHYL)ETHER, ... | 著者 | Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y. | 登録日 | 2024-09-05 | 公開日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis. Biochem.Biophys.Res.Commun., 733, 2024
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9JF5
| Arginine decarboxylase in Aspergillus oryzae complexed with arginine | 分子名称: | 1,2-ETHANEDIOL, AGMATINE, DI(HYDROXYETHYL)ETHER, ... | 著者 | Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y. | 登録日 | 2024-09-04 | 公開日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis. Biochem.Biophys.Res.Commun., 733, 2024
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1CKC
| T43A MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CKG
| T52V MUTANT HUMAN LYSOZYME | 分子名称: | Lysozyme C | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-05-05 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CJ9
| T40V MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CKF
| T52A MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CJ6
| T11A MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CJ8
| T40A MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1CJ7
| T11V MUTANT HUMAN LYSOZYME | 分子名称: | PROTEIN (LYSOZYME), SODIUM ION | 著者 | Takano, K, Yamagata, Y, Funahashi, J, Yutani, K. | 登録日 | 1999-04-22 | 公開日 | 1999-04-30 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,). Biochemistry, 38, 1999
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1TAB
| STRUCTURE OF THE TRYPSIN-BINDING DOMAIN OF BOWMAN-BIRK TYPE PROTEASE INHIBITOR AND ITS INTERACTION WITH TRYPSIN | 分子名称: | BOWMAN-BIRK TYPE PROTEINASE INHIBITOR, TRYPSIN | 著者 | Tsunogae, Y, Tanaka, I, Yamane, T, Kikkawa, J.-I, Ashida, T, Ishikawa, C, Watanabe, K, Nakamura, S, Takahashi, K. | 登録日 | 1990-10-15 | 公開日 | 1992-01-15 | 最終更新日 | 2024-06-05 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure of the trypsin-binding domain of Bowman-Birk type protease inhibitor and its interaction with trypsin. J.Biochem.(Tokyo), 100, 1986
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1X12
| Structure of Mutant Pyrrolidone Carboxyl Peptidase (E192D) from a Hyperthermophile, Pyrococcus furiosus | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Kaushik, J.K, Yamagata, Y, Ogasahara, K, Yutani, K. | 登録日 | 2005-03-31 | 公開日 | 2006-06-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Completely buried, non-ion-paired glutamic acid contributes favorably to the conformational stability of pyrrolidone carboxyl peptidases from hyperthermophiles. Biochemistry, 45, 2006
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1X10
| Structure of Mutant Pyrrolidone Carboxyl Peptidase (E192A) from a Hyperthermophile, Pyrococcus furiosus | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Kaushik, J.K, Yamagata, Y, Ogasahara, K, Yutani, K. | 登録日 | 2005-03-31 | 公開日 | 2006-06-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Completely buried, non-ion-paired glutamic acid contributes favorably to the conformational stability of pyrrolidone carboxyl peptidases from hyperthermophiles. Biochemistry, 45, 2006
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1IZC
| Crystal Structure Analysis of Macrophomate synthase | 分子名称: | MAGNESIUM ION, PYRUVIC ACID, macrophomate synthase intermolecular Diels-Alderase | 著者 | Ose, T, Watanabe, K, Mie, T, Honma, M, Watanabe, H, Yao, M, Oikawa, H, Tanaka, I. | 登録日 | 2002-10-01 | 公開日 | 2003-04-01 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase. Nature, 422, 2003
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1Z8T
| Structure of Mutant Pyrrolidone Carboxyl Peptidase (E192Q) from a Hyperthermophile, Pyrococcus furiosus | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Kaushik, J.K, Yamagata, Y, Ogasahara, K, Yutani, K. | 登録日 | 2005-03-31 | 公開日 | 2006-06-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Completely buried, non-ion-paired glutamic acid contributes favorably to the conformational stability of pyrrolidone carboxyl peptidases from hyperthermophiles. Biochemistry, 45, 2006
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1Z8W
| Structure of Mutant Pyrrolidone Carboxyl Peptidase (E192I) from a Hyperthermophile, Pyrococcus furiosus | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Kaushik, J.K, Yamagata, Y, Ogasahara, K, Yutani, K. | 登録日 | 2005-03-31 | 公開日 | 2006-06-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Completely buried, non-ion-paired glutamic acid contributes favorably to the conformational stability of pyrrolidone carboxyl peptidases from hyperthermophiles. Biochemistry, 45, 2006
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1Z8X
| Structure of Mutant Pyrrolidone Carboxyl Peptidase (E192V) from a Hyperthermophile, Pyrococcus furiosus | 分子名称: | Pyrrolidone-carboxylate peptidase | 著者 | Kaushik, J.K, Yamagata, Y, Ogasahara, K, Yutani, K. | 登録日 | 2005-03-31 | 公開日 | 2006-06-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Completely buried, non-ion-paired glutamic acid contributes favorably to the conformational stability of pyrrolidone carboxyl peptidases from hyperthermophiles. Biochemistry, 45, 2006
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1IOI
| x-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, pyrococcus furiosus, and its cys-free mutant | 分子名称: | PYRROLIDONE CARBOXYL PEPTIDASE | 著者 | Tanaka, H, Chinami, M, Ota, M, Tsukihara, T, Yutani, K. | 登録日 | 2001-03-09 | 公開日 | 2001-03-21 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus, and its cys-free mutant. J.Biochem., 130, 2001
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1IOF
| X-RAY CRYSTALLINE STRUCTURES OF PYRROLIDONE CARBOXYL PEPTIDASE FROM A HYPERTHERMOPHILE, PYROCOCCUS FURIOSUS, AND ITS CYS-FREE MUTANT | 分子名称: | PYRROLIDONE CARBOXYL PEPTIDASE | 著者 | Tanaka, H, Chinami, M, Ota, M, Tsukihara, T, Yutani, K. | 登録日 | 2001-03-09 | 公開日 | 2001-03-21 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus, and its cys-free mutant. J.Biochem., 130, 2001
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3IXZ
| Pig gastric H+/K+-ATPase complexed with aluminium fluoride | 分子名称: | Potassium-transporting ATPase alpha, Potassium-transporting ATPase subunit beta | 著者 | Abe, K, Tani, K, Nishizawa, T, Fujiyoshi, Y. | 登録日 | 2009-03-09 | 公開日 | 2009-06-23 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (6.5 Å) | 主引用文献 | Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle Embo J., 28, 2009
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8YHR
| DHODH in complex with furocoumavirin | 分子名称: | 4-methyl-8-[(S)-oxidanyl(phenyl)methyl]-9-phenyl-furo[2,3-h]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ... | 著者 | Hara, K, Okumura, H, Nakahara, M, Sato, M, Hashimoto, H, Osada, H, Watanabe, K. | 登録日 | 2024-02-28 | 公開日 | 2024-05-22 | 最終更新日 | 2024-06-05 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural and Functional Analyses of Inhibition of Human Dihydroorotate Dehydrogenase by Antiviral Furocoumavirin. Biochemistry, 63, 2024
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2D1I
| Structure of human Atg4b | 分子名称: | Cysteine protease APG4B | 著者 | Kumanomidou, T, Mizushima, T, Komatsu, M, Suzuki, A, Tanida, I, Sou, Y.S, Ueno, T, Kominami, E, Tanaka, K, Yamane, T. | 登録日 | 2005-08-24 | 公開日 | 2006-01-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The Crystal Structure of Human Atg4b, a Processing and De-conjugating Enzyme for Autophagosome-forming Modifiers J.Mol.Biol., 355, 2006
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2D1V
| Crystal structure of DNA-binding domain of Bacillus subtilis YycF | 分子名称: | Transcriptional regulatory protein yycF | 著者 | Okajima, T, Okada, A, Watanabe, T, Yamamoto, K, Tanizawa, K, Utsumi, R. | 登録日 | 2005-09-01 | 公開日 | 2006-09-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Response regulator YycF essential for bacterial growth: X-ray crystal structure of the DNA-binding domain and its PhoB-like DNA recognition motif Febs Lett., 582, 2008
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8AU4
| Structural insights reveal a heterotetramer between oncogenic K-Ras4BG12V and Rgl2, a RalA/B activator | 分子名称: | Ral guanine nucleotide dissociation stimulator-like 2 | 著者 | Tariq, M, Ikeya, T, Togashi, N, Fairall, L, Alejo, C.B, Kamei, S, Alonso, B.R, Campillo, M.A.M, Hudson, A, Ito, Y, Schwabe, J, Dominguez, C, Tanaka, K. | 登録日 | 2022-08-25 | 公開日 | 2023-08-23 | 最終更新日 | 2023-10-25 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator. Life Sci Alliance, 7, 2024
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8W7D
| Crystal structure of EcPPAT-FR901483 complex | 分子名称: | Amidophosphoribosyltransferase, [(1S,3S,6S,7S,8R,9S)-6-[(4-methoxyphenyl)methyl]-3-(methylamino)-7-oxidanyl-5-azatricyclo[6.3.1.0^1,5]dodecan-9-yl] dihydrogen phosphate | 著者 | Hara, K, Hashimoto, H, Nakahara, M, Sato, M, Watanabe, K. | 登録日 | 2023-08-30 | 公開日 | 2023-12-13 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.81 Å) | 主引用文献 | Uncommon Arrangement of Self-resistance Allows Biosynthesis of de novo Purine Biosynthesis Inhibitor that Acts as an Immunosuppressor. J.Am.Chem.Soc., 145, 2023
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