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2CQQ
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BU of 2cqq by Molmil
Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA
分子名称: DnaJ homolog subfamily C member 1
著者Doi-Katayama, Y, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-20
公開日2005-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA
To be Published
2CRP
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BU of 2crp by Molmil
Solution structure of the RGS domain of regulator of G-protein signalling 5 (RGS 5)
分子名称: Regulator of G-protein signaling 5
著者Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-20
公開日2005-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the RGS domain of regulator of G-protein signalling 5 (RGS 5)
To be Published
2CRW
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BU of 2crw by Molmil
Solution structure of the ArfGap domain of ADP-ribosylation factor GTPaseactivating protein 3 (ArfGap 3)
分子名称: ADP-ribosylation factor GTPase-activating protein 3, ZINC ION
著者Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-20
公開日2005-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ArfGap domain of ADP-ribosylation factor GTPaseactivating protein 3 (ArfGap 3)
To be published
2CSK
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BU of 2csk by Molmil
Solution structure of PX domain from human SNX12
分子名称: Sorting nexin 12
著者Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-22
公開日2005-11-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of PX domain from human SNX12
To be Published
2CSO
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BU of 2cso by Molmil
Solution structure of the DEP domain of human pleckstrin
分子名称: Pleckstrin
著者Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-22
公開日2005-11-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DEP domain of human pleckstrin
to be published
8J72
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BU of 8j72 by Molmil
Crystal structure of mammalian Trim71 in complex with lncRNA Trincr1
分子名称: E3 ubiquitin-protein ligase TRIM71, lncRNA Trincr1
著者Shi, F.D, Zhang, K, Che, S.Y, Zhi, S.X, Yang, N.
登録日2023-04-27
公開日2024-03-06
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Molecular mechanism governing RNA-binding property of mammalian TRIM71 protein.
Sci Bull (Beijing), 69, 2024
5H57
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BU of 5h57 by Molmil
Ferredoxin III from maize root
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-3, chloroplastic
著者Kurisu, G, Hase, T.
登録日2016-11-04
公開日2017-02-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the isotype-specific interactions of ferredoxin and ferredoxin: NADP(+) oxidoreductase: an evolutionary switch between photosynthetic and heterotrophic assimilation
Photosyn. Res., 134, 2017
5H59
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BU of 5h59 by Molmil
Ferredoxin-NADP+ reductase from maize root
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
著者Kurisu, G, Hase, T.
登録日2016-11-04
公開日2017-02-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for the isotype-specific interactions of ferredoxin and ferredoxin: NADP(+) oxidoreductase: an evolutionary switch between photosynthetic and heterotrophic assimilation
Photosyn. Res., 134, 2017
5H5J
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BU of 5h5j by Molmil
Complex between ferredoxin and ferredoxin-NADP+ reductase from maize root
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, ...
著者Kurisu, G, Hase, T.
登録日2016-11-05
公開日2017-02-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the isotype-specific interactions of ferredoxin and ferredoxin: NADP(+) oxidoreductase: an evolutionary switch between photosynthetic and heterotrophic assimilation
Photosyn. Res., 134, 2017
2HR1
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BU of 2hr1 by Molmil
Ternary structure of WT M.HhaI C5-Cytosine DNA methyltransferase with unmodified DNA and AdoHcy
分子名称: 5'-D(*GP*AP*TP*AP*GP*CP*GP*CP*TP*AP*TP*C)-3', 5'-D(*TP*GP*AP*TP*AP*GP*CP*GP*CP*TP*AP*TP*C)-3', Modification methylase HhaI, ...
著者Shieh, F.
登録日2006-07-19
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The Role of Arg165 Towards Base Flipping, Base Stabilization and Catalysis in M.HhaI.
J.Mol.Biol., 362, 2006
1TFB
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BU of 1tfb by Molmil
NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
分子名称: TFIIB
著者Bagby, S, Ikura, M.
登録日1996-11-14
公開日1997-03-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
5WO4
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BU of 5wo4 by Molmil
JAK1 complexed with compound 28
分子名称: 3-[(4-chloro-3-methoxyphenyl)amino]-1-[(3R,4S)-4-cyanooxan-3-yl]-1H-pyrazole-4-carboxamide, Tyrosine-protein kinase JAK1
著者Lesburg, C.A, Patel, S.B.
登録日2017-08-01
公開日2017-12-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The Discovery of 3-((4-Chloro-3-methoxyphenyl)amino)-1-((3R,4S)-4-cyanotetrahydro-2H-pyran-3-yl)-1H-pyrazole-4-carboxamide, a Highly Ligand Efficient and Efficacious Janus Kinase 1 Selective Inhibitor with Favorable Pharmacokinetic Properties.
J. Med. Chem., 60, 2017
5HD2
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BU of 5hd2 by Molmil
The crystal structure of SeMet-Cry51Aa2-L11M
分子名称: Parasporal crystal protein
著者Rydel, T.J, Sturman, E.J, Moshiri, F.
登録日2016-01-04
公開日2016-07-20
最終更新日2016-08-03
実験手法X-RAY DIFFRACTION (2.276 Å)
主引用文献A transgenic approach for controlling Lygus in cotton.
Nat Commun, 7, 2016
5TZ2
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BU of 5tz2 by Molmil
Crystal structure of human CD47 ECD bound to Fab of C47B222
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C47B222 Fab Heavy Chain, ...
著者Cardoso, R.M.F.
登録日2016-11-21
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Anti-leukemic activity and tolerability of anti-human CD47 monoclonal antibodies.
Blood Cancer J, 7, 2017
5TZT
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BU of 5tzt by Molmil
Crystal structure of human CD47 ECD bound to Fab of C47B161
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Heavy Chain of Fab C47B161, ...
著者Cardoso, R.M.F.
登録日2016-11-22
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Anti-leukemic activity and tolerability of anti-human CD47 monoclonal antibodies.
Blood Cancer J, 7, 2017
5TZU
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BU of 5tzu by Molmil
Crystal structure of human CD47 ECD bound to Fab of B6H12.2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Cardoso, R.M.F.
登録日2016-11-22
公開日2017-03-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Anti-leukemic activity and tolerability of anti-human CD47 monoclonal antibodies.
Blood Cancer J, 7, 2017
7DQ6
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BU of 7dq6 by Molmil
Crystal structure of HitB in complex with (S)-beta-3-Br-phenylalanine sulfamoyladenosine
分子名称: CALCIUM ION, Putative ATP-dependent b-aminoacyl-ACP synthetase, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl N-[(3S)-3-azanyl-3-(3-bromophenyl)propanoyl]sulfamate
著者Kudo, F, Takahashi, S, Miyanaga, A, Nakazawa, Y, Eguchi, T.
登録日2020-12-22
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mutational Biosynthesis of Hitachimycin Analogs Controlled by the beta-Amino Acid-Selective Adenylation Enzyme HitB.
Acs Chem.Biol., 16, 2021
7DQ5
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BU of 7dq5 by Molmil
Crystal structure of HitB in complex with (S)-beta-phenylalanine sulfamoyladenosine
分子名称: CALCIUM ION, Putative ATP-dependent b-aminoacyl-ACP synthetase, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(3~{S})-3-azanyl-3-phenyl-propanoyl]sulfamate
著者Kudo, F, Takahashi, S, Miyanaga, A, Nakazawa, Y, Eguchi, T.
登録日2020-12-22
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Mutational Biosynthesis of Hitachimycin Analogs Controlled by the beta-Amino Acid-Selective Adenylation Enzyme HitB.
Acs Chem.Biol., 16, 2021
8ILL
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BU of 8ill by Molmil
Crystal structure of a highly photostable and bright green fluorescent protein at pH5.6
分子名称: CHLORIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, green fluorescent protein
著者Ago, H, Ando, R, Hirano, M, Shimozono, S, Miyawaki, A, Yamamoto, M.
登録日2023-03-03
公開日2023-10-04
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献StayGold variants for molecular fusion and membrane-targeting applications.
Nat.Methods, 21, 2024
8ILK
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BU of 8ilk by Molmil
Crystal structure of a highly photostable and bright green fluorescent protein at pH8.5
分子名称: CHLORIDE ION, Green FLUORESCENT PROTEIN
著者Ago, H, Ando, R, Hirano, M, Shimozono, S, Miyawaki, A, Yamamoto, M.
登録日2023-03-03
公開日2023-10-04
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献StayGold variants for molecular fusion and membrane-targeting applications.
Nat.Methods, 21, 2024
2ROZ
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BU of 2roz by Molmil
Structure of the C-terminal PID Domain of Fe65L1 Complexed with the Cytoplasmic Tail of APP Reveals a Novel Peptide Binding Mode
分子名称: Amyloid beta A4 precursor protein-binding family B member 2, peptide from Amyloid beta A4 protein
著者Li, H, Koshiba, S, Tochio, N, Watanabe, S, Harada, T, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-25
公開日2008-07-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
7Y62
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BU of 7y62 by Molmil
Crystal structure of human TFEB HLHLZ domain
分子名称: Transcription factor EB
著者Yang, G, Li, P, Lin, Y, Liu, Z, Sun, H, Zhao, Z, Fang, P, Wang, J.
登録日2022-06-18
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A small-molecule drug inhibits autophagy gene expression through the central regulator TFEB.
Proc.Natl.Acad.Sci.USA, 120, 2023
3VS2
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BU of 3vs2 by Molmil
Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 7-[cis-4-(4-methylpiperazin-1-yl)cyclohexyl]-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine
分子名称: 7-[cis-4-(4-methylpiperazin-1-yl)cyclohexyl]-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine, CALCIUM ION, CHLORIDE ION, ...
著者Kuratani, M, Tomabechi, Y, Niwa, H, Parker, J.L, Handa, N, Yokoyama, S.
登録日2012-04-21
公開日2013-05-01
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.609 Å)
主引用文献A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo
Sci Transl Med, 5, 2013
3VRY
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BU of 3vry by Molmil
Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane
分子名称: 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane, CALCIUM ION, CHLORIDE ION, ...
著者Kuratani, M, Tomabechi, Y, Niwa, H, Handa, N, Yokoyama, S.
登録日2012-04-21
公開日2013-05-01
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.481 Å)
主引用文献A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo
Sci Transl Med, 5, 2013
3VRZ
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BU of 3vrz by Molmil
Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 1-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]-3-benzylurea
分子名称: 1-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]-3-benzylurea, CALCIUM ION, CHLORIDE ION, ...
著者Kuratani, M, Tomabechi, Y, Handa, N, Yokoyama, S.
登録日2012-04-21
公開日2013-05-01
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.218 Å)
主引用文献A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo
Sci Transl Med, 5, 2013

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