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7JZU
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BU of 7jzu by Molmil
SARS-CoV-2 spike in complex with LCB1 (local refinement of the RBD and LCB1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, LCB1, Spike glycoprotein
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-09-02
公開日2020-09-23
最終更新日2020-11-04
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 370, 2020
7QLE
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BU of 7qle by Molmil
Crystal structure of S-layer protein SlpA from Lactobacillus acidophilus, domain I (aa 32-198)
分子名称: S-layer protein
著者Sagmeister, T, Eder, M, Vejzovic, D, Dordic, A, Pavkov-Keller, T.
登録日2021-12-20
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
To Be Published
7QLD
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BU of 7qld by Molmil
Crystal structure of S-layer protein SlpA from Lactobacillus acidophilus, domain I, Co-crystallization with HgCl2, Mutation Ser146Cys, (aa 32-198)
分子名称: CHLORIDE ION, MERCURY (II) ION, S-layer protein
著者Sagmeister, T, Vejzovic, D, Eder, M, Dordic, A, Pavkov-Keller, T.
登録日2021-12-20
公開日2022-12-28
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
To Be Published
7QLH
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BU of 7qlh by Molmil
Crystal structure of S-layer protein SlpA from Lactobacillus amylovorus, domain I (aa 48-213)
分子名称: PHOSPHATE ION, S-layer, SODIUM ION
著者Grininger, C, Sagmeister, T, Eder, E, Vejzovic, D, Pavkov-Keller, T.
登録日2021-12-20
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
to be published
8C3W
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BU of 8c3w by Molmil
Crystal structure of a computationally designed heme binding protein, dnHEM1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Ortmayer, M, Levy, C.
登録日2022-12-29
公開日2023-07-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site.
J.Am.Chem.Soc., 145, 2023
5JSB
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BU of 5jsb by Molmil
Crystal structure of Mcl1-inhibitor complex
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, Mcl-1 inhibitor
著者Shen, B.W, Stoddard, B.L.
登録日2016-05-07
公開日2016-11-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer.
Elife, 5, 2016
5JSN
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BU of 5jsn by Molmil
Bcl2-inhibitor complex
分子名称: Apoptosis regulator Bcl-2, Bcl2 inhibitor
著者Shen, B.W, Stoddard, B.L.
登録日2016-05-09
公開日2016-11-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer.
Elife, 5, 2016
5KUX
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BU of 5kux by Molmil
Designed influenza hemagglutinin binding protein HSB.2
分子名称: Designed influenza inhibitor protein HSB.2
著者Lee, P.S, Bernard, S.M, Wilson, I.A.
登録日2016-07-13
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site.
Nat. Biotechnol., 35, 2017
5KUY
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BU of 5kuy by Molmil
Influenza hemagglutinin H3 A/Hong Kong/1/1968 in complex with designed inhibitor protein HSB.2A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Designed influenza inhibitor HSB.2A, ...
著者Bernard, S.M, Wilson, I.A.
登録日2016-07-13
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site.
Nat. Biotechnol., 35, 2017
8EOV
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BU of 8eov by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
分子名称: C2HR1_4r, PHOSPHATE ION
著者Bera, A.K, Bethel, N.P.
登録日2022-10-04
公開日2023-08-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8EOZ
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BU of 8eoz by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
分子名称: C3HR3_4r
著者Bera, A.K, Bethel, N.P, Kang, A.
登録日2022-10-04
公開日2023-08-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8EOX
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BU of 8eox by Molmil
Precisely patterned nanofibers made from extendable protein multiplexes
分子名称: C4HR1_4r
著者Bera, A.K, Bethel, N.P.
登録日2022-10-04
公開日2023-08-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Precisely patterned nanofibres made from extendable protein multiplexes.
Nat.Chem., 15, 2023
8EVM
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BU of 8evm by Molmil
De novo design of chlorophyll special pair containing protein assemblies
分子名称: Chlorophyll dimer protein designs, Special Pair 3 (SP3x)
著者Bera, A.K, Ennist, N.M.
登録日2022-10-20
公開日2024-05-15
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献De novo design of chlorophyll special pair proteins
To Be Published
7UDJ
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BU of 7udj by Molmil
Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide
分子名称: 4xPAW peptide, De novo designed helical repeat protein RPB_PEW3_R4
著者Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D.
登録日2022-03-20
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献De novo design of modular peptide-binding proteins by superhelical matching.
Nature, 616, 2023
7QFL
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BU of 7qfl by Molmil
Crystal structure of S-layer protein SlpA from Lactobacillus acidophilus, domain II (aa 199-308)
分子名称: ACETATE ION, PHOSPHATE ION, S-layer protein
著者Sagmeister, T, Dordic, A, Eder, E, Pavkov-Keller, T.
登録日2021-12-06
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
To be published
7QFK
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BU of 7qfk by Molmil
Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain II, Co-Crystallization with HgCl2, Mutation Ser316Cys (aa 194-362)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BROMIDE ION, CHLORIDE ION, ...
著者Sagmeister, T, Pavkov-Keller, T, Buhlheller, C.
登録日2021-12-06
公開日2022-12-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
To be published
7QFI
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BU of 7qfi by Molmil
Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain I (aa 31-182)
分子名称: CALCIUM ION, SlpX
著者Sagmeister, T, Damisch, E, Millan, C, Uson, I, Eder, M, Pavkov-Keller, T.
登録日2021-12-06
公開日2022-12-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The self-assembly of the S-layer protein from Lactobacilli acidophilus
To be published
7QEC
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BU of 7qec by Molmil
Crystal structure of SlpA - domain II, domain that is involved in the self-assembly of the S-layer from Lactobacillus amylovorus
分子名称: S-layer
著者Eder, M, Dordic, A, Millan, C, Sagmeister, T, Uson, I, Pavkov-Keller, T.
登録日2021-12-02
公開日2022-12-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The self-assembly of the S-layer protein from lactobacilli
to be published
2AR1
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BU of 2ar1 by Molmil
Structure of Hypothetical protein from Leishmania major
分子名称: GLYCEROL, hypothetical protein
著者Arakaki, T.L, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
登録日2005-08-18
公開日2005-08-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Structure of Lmaj006129AAA, a hypothetical protein from Leishmania major.
Acta Crystallogr.,Sect.F, 62, 2006
7O41
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BU of 7o41 by Molmil
Hexameric composite model of the Inner Membrane Complex (IMC) with the Arches from the fully-assembled R388 type IV secretion system determined by cryo-EM.
分子名称: TrwG protein, TrwK protein, TrwM protein
著者Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
登録日2021-04-04
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7O3V
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BU of 7o3v by Molmil
Stalk complex structure (TrwJ/VirB5-TrwI/VirB6) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
分子名称: TrwI protein, TrwJ protein
著者Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
登録日2021-04-03
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7O42
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BU of 7o42 by Molmil
TrwK/VirB4unbound trimer of dimers complex (with Hcp1) from the R388 type IV secretion system determined by cryo-EM.
分子名称: TrwK protein,Protein hcp1
著者Vadakkepat, A.K, Mace, K, Lukoyanova, N, Waksman, G.
登録日2021-04-04
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7O43
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BU of 7o43 by Molmil
TrwK/VirB4unbound dimer complex from R388 type IV secretion system determined by cryo-EM.
分子名称: TrwK protein
著者Vadakkepat, A.K, Mace, K, Lukoyanova, N, Waksman, G.
登録日2021-04-04
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7O3J
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BU of 7o3j by Molmil
O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
分子名称: TrwE protein, TrwF protein, TrwH protein
著者Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
登録日2021-04-01
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022
7O3T
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BU of 7o3t by Molmil
I-layer structure (TrwF/VirB9NTD, TrwE/VirB10NTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
分子名称: TrwE protein, TrwF protein
著者Mace, K, Vadakkepat, A.K, Lukoyanova, N, Waksman, G.
登録日2021-04-03
公開日2022-06-22
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of a type IV secretion system.
Nature, 607, 2022

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