Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6NQD
DownloadVisualize
BU of 6nqd by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 G52K5 heavy chain, ...
著者Fang, Q, Rossmann, M.G.
登録日2019-01-21
公開日2019-03-06
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献A sequestered fusion peptide in the structure of an HIV-1 transmitted founder envelope trimer.
Nat Commun, 10, 2019
7Y6D
DownloadVisualize
BU of 7y6d by Molmil
Cryo-EM structure of SARS-CoV-2 Delta variant spike proteins on intact virions: 3 Closed RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xu, J, Song, Y, Li, S.
登録日2022-06-20
公開日2023-06-07
実験手法ELECTRON MICROSCOPY (4.39 Å)
主引用文献In situ architecture and membrane fusion of SARS-CoV-2 Delta variant.
Proc.Natl.Acad.Sci.USA, 120, 2023
7NAQ
DownloadVisualize
BU of 7naq by Molmil
Human PA200-20S proteasome complex
分子名称: INOSITOL HEXAKISPHOSPHATE, Proteasome activator complex subunit 4, Proteasome subunit alpha type-1, ...
著者Zhao, J, Makhija, S, Huang, B, Cheng, Y.
登録日2021-06-22
公開日2022-11-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7NAP
DownloadVisualize
BU of 7nap by Molmil
Human PA28-20S-PA28 proteasome complex
分子名称: Proteasome activator complex subunit 1, Proteasome activator complex subunit 2, Proteasome subunit alpha type-1, ...
著者Zhao, J, Makhija, S, Huang, B, Cheng, Y.
登録日2021-06-22
公開日2022-11-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7NAO
DownloadVisualize
BU of 7nao by Molmil
Human PA28-20S proteasome complex
分子名称: Proteasome activator complex subunit 1, Proteasome activator complex subunit 2, Proteasome subunit alpha type-1, ...
著者Zhao, J, Makhija, S, Huang, B, Cheng, Y.
登録日2021-06-22
公開日2022-11-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7NAN
DownloadVisualize
BU of 7nan by Molmil
Human 20S proteasome core particle
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Zhao, J, Makhija, S, Huang, B, Cheng, Y.
登録日2021-06-22
公開日2022-11-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
2XA4
DownloadVisualize
BU of 2xa4 by Molmil
Inhibitors of Jak2 Kinase domain
分子名称: 5-CHLORO-N2-[(1S)-1-(5-FLUOROPYRIMIDIN-2-YL)ETHYL]-N4-(5-METHYL-1H-PYRAZOL-3-YL)PYRIMIDINE-2,4-DIAMINE, TYROSINE-PROTEIN KINASE JAK2
著者Read, J, Green, I, Pollard, H, Howard, T, Mott, R.
登録日2010-03-26
公開日2010-12-15
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Discovery of 5-Chloro-N2-[(1S)-1-(5-Fluoropyrimidin-2-Yl) Ethyl]-N4-(5-Methyl-1H-Pyrazol-3-Yl)Pyrimidine-2,4-Diamine (Azd1480) as a Novel Inhibitor of the Jak/Stat Pathway
J.Med.Chem., 54, 2011
7OTQ
DownloadVisualize
BU of 7otq by Molmil
Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome
分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ...
著者Bacic, L, Gaullier, G, Deindl, S.
登録日2021-06-10
公開日2021-09-15
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome
Elife, 10, 2021
1AZF
DownloadVisualize
BU of 1azf by Molmil
CHICKEN EGG WHITE LYSOZYME CRYSTAL GROWN IN BROMIDE SOLUTION
分子名称: BROMIDE ION, LYSOZYME
著者Lim, K, Nadarajah, A, Forsythe, E.L, Pusey, M.L.
登録日1997-11-17
公開日1998-02-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Locations of bromide ions in tetragonal lysozyme crystals.
Acta Crystallogr.,Sect.D, 54, 1998
2I1V
DownloadVisualize
BU of 2i1v by Molmil
Crystal structure of PFKFB3 in complex with ADP and Fructose-2,6-bisphosphate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, ...
著者Kim, S.G, El-Maghrabi, M.R, Lee, Y.H.
登録日2006-08-15
公開日2007-07-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase
J.Mol.Biol., 370, 2007
7SVP
DownloadVisualize
BU of 7svp by Molmil
Structure of compound 34 bound to human Phospholipase D2 catalytic domain
分子名称: 1-(1-{(2S)-1-[(3R,5R)-3,5-dimethylpiperazin-1-yl]-1-oxopropan-2-yl}piperidin-4-yl)-1,3-dihydro-2H-benzimidazol-2-one, Phospholipase D2
著者Metrick, C.M, Chodaparambil, J.V.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery of Phospholipase D Inhibitors with Improved Drug-like Properties and Central Nervous System Penetrance.
Acs Med.Chem.Lett., 13, 2022
1KOS
DownloadVisualize
BU of 1kos by Molmil
SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION
分子名称: 5'-R(*CP*UP*GP*UP*GP*(5MU)P*UP*CP*GP*AP*UP*(CH)P*CP*AP*CP*AP*G)- 3'
著者Koshlap, K.M, Guenther, R, Sochacka, E, Malkiewicz, A, Agris, P.F.
登録日1999-05-03
公開日1999-10-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
Biochemistry, 38, 1999
7VRM
DownloadVisualize
BU of 7vrm by Molmil
crystal structure of BRD2-BD2 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, THEOPHYLLINE
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-23
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRO
DownloadVisualize
BU of 7vro by Molmil
crystal structure of BRD2-BD1 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, SULFATE ION, THEOBROMINE
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-23
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRQ
DownloadVisualize
BU of 7vrq by Molmil
crystal structure of BRD2-BD2 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, GLYCEROL, THEOBROMINE
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-23
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VSF
DownloadVisualize
BU of 7vsf by Molmil
crystal structure of BRD2-BD1 in complex with purine derivative
分子名称: 3-methyl-7-propyl-purine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bromodomain-containing protein 2, ...
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-26
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VS0
DownloadVisualize
BU of 7vs0 by Molmil
crystal structure of BRD2-BD2 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, Doxofylline, GLYCEROL
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-25
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRK
DownloadVisualize
BU of 7vrk by Molmil
crystal structure of BRD2-BD1 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, SULFATE ION, THEOPHYLLINE
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-23
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRH
DownloadVisualize
BU of 7vrh by Molmil
crystal structure of BRD2-BD1 in complex with guanosine analog
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 9-HYROXYETHOXYMETHYLGUANINE, Bromodomain-containing protein 2, ...
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-22
公開日2023-02-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VS1
DownloadVisualize
BU of 7vs1 by Molmil
crystal structure of BRD2-BD2 in complex with purine derivative
分子名称: 3-methyl-7-propyl-purine-2,6-dione, Bromodomain-containing protein 2, GLYCEROL
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-25
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRI
DownloadVisualize
BU of 7vri by Molmil
crystal structure of BRD2-BD2 in complex with guanosine analog
分子名称: 9-HYROXYETHOXYMETHYLGUANINE, Bromodomain-containing protein 2
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-23
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
7VRZ
DownloadVisualize
BU of 7vrz by Molmil
crystal structure of BRD2-BD1 in complex with purine derivative
分子名称: Bromodomain-containing protein 2, Doxofylline, SULFATE ION
著者Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
登録日2021-10-25
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
6UZC
DownloadVisualize
BU of 6uzc by Molmil
Portal vertex structure of bacteriophage T4
分子名称: Major capsid protein, Portal protein
著者Fang, Q, Fokine, A, Rao, V.B.
登録日2019-11-14
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural morphing in a symmetry-mismatched viral vertex.
Nat Commun, 11, 2020
1XZW
DownloadVisualize
BU of 1xzw by Molmil
Sweet potato purple acid phosphatase/phosphate complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, ...
著者Schenk, G, Carrington, L.E, Gahan, L.R, Hamilton, S.E, de Jersey, J, Guddat, L.W.
登録日2004-11-12
公開日2004-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Phosphate forms an unusual tripodal complex with the Fe-Mn center of sweet potato purple acid phosphatase
Proc.Natl.Acad.Sci.USA, 102, 2005
5OPO
DownloadVisualize
BU of 5opo by Molmil
Crystal structure of R238G cN-II mutant
分子名称: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION
著者Hnizda, A, Pachl, P, Rezacova, P.
登録日2017-08-10
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Relapsed acute lymphoblastic leukemia-specific mutations in NT5C2 cluster into hotspots driving intersubunit stimulation.
Leukemia, 32, 2018

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon