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5W4U
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BU of 5w4u by Molmil
Pol II elongation complex with an N6-methyladenine-containing template
分子名称: 14mer non-template DNA, 29mer template DNA, 9mer RNA, ...
著者Wang, W, Wang, D.
登録日2017-06-13
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing.
J.Am.Chem.Soc., 139, 2017
5W51
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BU of 5w51 by Molmil
Pol II elongation complex with an N6-methyladenine-containing template and a matched UMPNPP
分子名称: 14mer non-template DNA, 29mer template DNA, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
著者Wang, W, Wang, D.
登録日2017-06-13
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.404 Å)
主引用文献Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing.
J.Am.Chem.Soc., 139, 2017
1F5S
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BU of 1f5s by Molmil
CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE FROM METHANOCOCCUS JANNASCHII
分子名称: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOSERINE PHOSPHATASE (PSP)
著者Wang, W, Kim, R, Jancarik, J, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2000-06-15
公開日2001-06-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of phosphoserine phosphatase from Methanococcus jannaschii, a hyperthermophile, at 1.8 A resolution.
Structure, 9, 2001
8SCZ
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BU of 8scz by Molmil
Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30
分子名称: Antiviral innate immune response receptor RIG-I, ZINC ION, p3SLR30
著者Wang, W, Pyle, A.M.
登録日2023-04-06
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30
To Be Published
8SD0
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BU of 8sd0 by Molmil
Cryo-EM structure of RIG-I in complex with p3SLR14
分子名称: Antiviral innate immune response receptor RIG-I, ZINC ION, p3SLR14
著者Wang, W, Pyle, A.M.
登録日2023-04-06
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of RIG-I in complex with p3SLR14
To Be Published
7N46
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BU of 7n46 by Molmil
ADP-binding state of the nucleotide-binding domain of Hsp70 DnaK
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, MAGNESIUM ION, ...
著者Wang, W, Hendrickson, W.A.
登録日2021-06-03
公開日2023-07-05
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Conformational equilibria in allosteric control of Hsp70 chaperones.
Mol.Cell, 81, 2021
6BM4
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BU of 6bm4 by Molmil
Pol II elongation complex with an abasic lesion at i-1 position,soaking UMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DNA (5'-D(P*CP*AP*(3DR)P*CP*TP*CP*TP*TP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Wang, W, Wang, D.
登録日2017-11-13
公開日2018-02-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BM2
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BU of 6bm2 by Molmil
Pol II elongation complex with an abasic lesion at i-1 position
分子名称: DNA (5'-D(P*CP*AP*(3DR)P*CP*TP*CP*TP*TP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Wang, W, Wang, D.
登録日2017-11-13
公開日2018-02-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.403 Å)
主引用文献Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BQF
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BU of 6bqf by Molmil
Pol II elongation complex with 'dT-AP' at i+1, i-1 position
分子名称: DNA (5'-D(P*CP*TP*(3DR)P*CP*TP*CP*TP*TP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Wang, W, Wang, D.
登録日2017-11-27
公開日2018-02-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BLP
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BU of 6blp by Molmil
Pol II elongation complex with an abasic lesion at i+1 position, soaking AMPCPP
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (5'-D(P*AP*(3DR)P*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Wang, W, Wang, D.
登録日2017-11-11
公開日2018-02-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BLO
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BU of 6blo by Molmil
Pol II elongation complex with an abasic lesion at i+1 position
分子名称: DNA (5'-D(P*AP*(3DR)P*CP*TP*CP*TP*CP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Wang, W, Wang, D.
登録日2017-11-10
公開日2018-02-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.401 Å)
主引用文献Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1S4M
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BU of 1s4m by Molmil
Crystal structure of flavin binding to FAD synthetase from Thermotoga maritina
分子名称: LUMICHROME, MAGNESIUM ION, riboflavin kinase/FMN adenylyltransferase
著者Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
登録日2004-01-16
公開日2004-10-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima
Proteins, 58, 2005
8DVR
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BU of 8dvr by Molmil
Cryo-EM structure of RIG-I bound to the end of p3SLR30 (+AMPPNP)
分子名称: Antiviral innate immune response receptor RIG-I, GUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
著者Wang, W, Pyle, A.M.
登録日2022-07-29
公開日2022-11-02
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands.
Mol.Cell, 82, 2022
8DVS
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BU of 8dvs by Molmil
Cryo-EM structure of RIG-I bound to the end of OHSLR30 (+ATP)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, MAGNESIUM ION, ...
著者Wang, W, Pyle, A.M.
登録日2022-07-29
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands.
Mol.Cell, 82, 2022
8DVU
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BU of 8dvu by Molmil
Cryo-EM structure of RIG-I bound to the internal sites of OHSLR30 (+ATP)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, MAGNESIUM ION, ...
著者Wang, W, Pyle, A.M.
登録日2022-07-29
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands.
Mol.Cell, 82, 2022
3VPV
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BU of 3vpv by Molmil
Crystal Structure of Pseudomonas aeruginosa Tsi2
分子名称: Tse2 specific immunity protein 2
著者Wang, W, Ding, J, Wang, D.C.
登録日2012-03-13
公開日2012-03-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Pseudomonas aeruginosa Tsi2
To be Published
1MRZ
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BU of 1mrz by Molmil
Crystal structure of a flavin binding protein from Thermotoga Maritima, TM379
分子名称: CITRIC ACID, Riboflavin kinase/FMN adenylyltransferase
著者Wang, W, Kim, R, Jancarik, J, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
登録日2002-09-19
公開日2003-09-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a flavin-binding protein from Thermotoga Maritima
Proteins, 52, 2003
1PWJ
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BU of 1pwj by Molmil
Structure of the Monomeric 8-kDa Dynein Light Chain and Mechanism of Domain Swapped Dimer Assembly
分子名称: dynein light chain-2
著者Wang, W, Lo, K.W.-H, Kan, H.-M, Fan, J.-S, Zhang, M.
登録日2003-07-02
公開日2003-10-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the Monomeric 8-kDa Dynein Light Chain and Mechanism of the Domain-swapped Dimer Assembly
J.Biol.Chem., 278, 2003
1L7P
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BU of 1l7p by Molmil
SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE
分子名称: PHOSPHATE ION, PHOSPHOSERINE, PHOSPHOSERINE PHOSPHATASE
著者Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-03-16
公開日2002-06-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1L7N
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BU of 1l7n by Molmil
TRANSITION STATE ANALOGUE OF PHOSPHOSERINE PHOSPHATASE (ALUMINUM FLUORIDE COMPLEX)
分子名称: ALUMINUM FLUORIDE, MAGNESIUM ION, PHOSPHOSERINE PHOSPHATASE, ...
著者Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-03-16
公開日2002-06-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1PWK
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BU of 1pwk by Molmil
Structure of the Monomeric 8-kDa Dynein Light Chain and Mechanism of Domain Swapped Dimer Assembly
分子名称: dynein light chain-2
著者Wang, W, Lo, K.W.-H, Kan, H.-M, Fan, J.-S, Zhang, M.
登録日2003-07-02
公開日2003-10-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the Monomeric 8-kDa Dynein Light Chain and Mechanism of the Domain-swapped Dimer Assembly
J.Biol.Chem., 278, 2003
1L7O
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BU of 1l7o by Molmil
CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE IN APO FORM
分子名称: ACETIC ACID, PHOSPHOSERINE PHOSPHATASE, ZINC ION
著者Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2002-03-16
公開日2002-06-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
4EZ9
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BU of 4ez9 by Molmil
Bacillus DNA Polymerase I Large Fragment Complex 2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*GP*TP*CP*AP*GP*G)-3'), ...
著者Wang, W, Beese, L.S.
登録日2012-05-02
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structures of a High-fidelity DNA Polymerase
to be published
4F2S
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BU of 4f2s by Molmil
DNA Polymerase I Large Fragment complex 4
分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), ...
著者Wang, W, Beese, L.S.
登録日2012-05-08
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Structures of a High-fidelity DNA Polymerase
to be published
4F3O
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DNA Polymerase I Large Fragment Complex 5
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*AP*TP*GP*AP*GP*AP*GP*TP*CP*AP*GP*G)-3'), ...
著者Wang, W, Beese, L.S.
登録日2012-05-09
公開日2013-07-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structures of a High-fidelity DNA Polymerase
to be published

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