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7XPA
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Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPD
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Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPB
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Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPF
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Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPG
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Cryo-EM structure of the T=3 lake sinai virus 1 (delta-N48) virus-like capsid at pH 6.5
分子名称: Capsid protein alpha, RNA (5'-R(P*UP*G)-3')
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7EXJ
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Crystal structure of alkaline alpha-galctosidase D383A mutant from Arabidopsis thaliana complexed with Raffinose
分子名称: Probable galactinol--sucrose galactosyltransferase 6, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-27
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXF
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Crystal structure of wild-type from Arabidopsis thaliana complexed with Galactose
分子名称: Probable galactinol--sucrose galactosyltransferase 6, beta-D-galactopyranose
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-27
公開日2022-11-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXR
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Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with Stachyose.
分子名称: Probable galactinol--sucrose galactosyltransferase 6, alpha-D-galactopyranose-(1-6)-alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-28
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXQ
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Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with product-galactose and sucrose.
分子名称: Probable galactinol--sucrose galactosyltransferase 6, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, beta-D-galactopyranose
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-28
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXH
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BU of 7exh by Molmil
Crystal structure of D383A mutant from Arabidopsis thaliana complexed with Galactinol.
分子名称: Probable galactinol--sucrose galactosyltransferase 6, galactinol
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-27
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXG
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BU of 7exg by Molmil
Crystal structure of D383A mutant from Arabidopsis thaliana complexed with Galactose.
分子名称: Probable galactinol--sucrose galactosyltransferase 6, beta-D-galactopyranose
著者Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
登録日2021-05-27
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
1O5W
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BU of 1o5w by Molmil
The structure basis of specific recognitions for substrates and inhibitors of rat monoamine oxidase A
分子名称: Amine oxidase [flavin-containing] A, FLAVIN-ADENINE DINUCLEOTIDE, N-[3-(2,4-DICHLOROPHENOXY)PROPYL]-N-METHYL-N-PROP-2-YNYLAMINE
著者Ma, J, Yoshimura, M, Yamashita, E, Nakagawa, A, Ito, A, Tsukihara, T.
登録日2003-10-06
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of rat monoamine oxidase a and its specific recognitions for substrates and inhibitors.
J.Mol.Biol., 338, 2004
2Z5Y
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Crystal Structure of Human Monoamine Oxidase A (G110A) with Harmine
分子名称: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Amine oxidase [flavin-containing] A, DECYL(DIMETHYL)PHOSPHINE OXIDE, ...
著者Son, S.Y, Ma, J, Yoshimura, M, Tsukihara, T.
登録日2007-07-20
公開日2008-04-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structure of human monoamine oxidase A at 2.2-A resolution: The control of opening the entry for substrates/inhibitors
Proc.Natl.Acad.Sci.Usa, 105, 2008
2Z5X
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BU of 2z5x by Molmil
Crystal Structure of Human Monoamine Oxidase A with Harmine
分子名称: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Amine oxidase [flavin-containing] A, DECYL(DIMETHYL)PHOSPHINE OXIDE, ...
著者Son, S.Y, Ma, J, Yoshimura, M, Tsukihara, T.
登録日2007-07-20
公開日2008-04-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of human monoamine oxidase A at 2.2-A resolution: The control of opening the entry for substrates/inhibitors
Proc.Natl.Acad.Sci.Usa, 105, 2008
4HL8
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Re-refinement of the vault ribonucleoprotein particle
分子名称: Major vault protein
著者Casanas, A, Querol-Audi, J, Guerra, P, Pous, J, Tanaka, H, Tsukihara, T, Verdaguer, V, Fita, I.
登録日2012-10-16
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献New features of vault architecture and dynamics revealed by novel refinement using the deformable elastic network approach.
Acta Crystallogr.,Sect.D, 69, 2013
2GW3
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BU of 2gw3 by Molmil
Crystal structure of stony coral fluorescent protein Kaede, green form
分子名称: Kaede, NICKEL (II) ION
著者Hayashi, I, Mizuno, H, Miyawaki, A, Ikura, M.
登録日2006-05-03
公開日2007-05-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede.
J.Mol.Biol., 372, 2007
2GW4
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BU of 2gw4 by Molmil
Crystal structure of stony coral fluorescent protein Kaede, red form
分子名称: Kaede, NICKEL (II) ION
著者Hayashi, I, Mizuno, H, Miyawako, A, Ikura, M.
登録日2006-05-03
公開日2007-05-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede.
J.Mol.Biol., 372, 2007
2E0M
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BU of 2e0m by Molmil
Mutant Human Ribonuclease 1 (T24L, Q28L, R31L, R32L)
分子名称: CADMIUM ION, CHLORIDE ION, Ribonuclease
著者Yamada, H, Tamada, T, Kosaka, M, Kuroki, R.
登録日2006-10-10
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines
Protein Sci., 16, 2007
2E0O
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BU of 2e0o by Molmil
Mutant Human Ribonuclease 1 (V52L, D53L, N56L, F59L)
分子名称: GLYCEROL, Ribonuclease, SULFATE ION
著者Yamada, H, Tamada, T, Kosaka, M, Kuroki, R.
登録日2006-10-10
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines
Protein Sci., 16, 2007
2E0L
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BU of 2e0l by Molmil
Mutant Human Ribonuclease 1 (Q28L, R31L, R32L)
分子名称: CADMIUM ION, CHLORIDE ION, Ribonuclease
著者Yamada, H, Tamada, T, Kosaka, M, Kuroki, R.
登録日2006-10-10
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines
Protein Sci., 16, 2007
2E0J
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BU of 2e0j by Molmil
Mutant Human Ribonuclease 1 (R31L, R32L)
分子名称: Ribonuclease
著者Yamada, H, Tamada, T, Kosaka, M, Kuroki, R.
登録日2006-10-10
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines
Protein Sci., 16, 2007
5XQW
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BU of 5xqw by Molmil
Catalytic antibody 7B9
分子名称: Fab fragment of catalytic antibody 7B9, heavy chain, light chain, ...
著者Ito, N, Fujii, I, Tsumuraya, T.
登録日2017-06-07
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of the broad substrate tolerance of the antibody 7B9-catalyzed hydrolysis of p-nitrobenzyl esters.
Bioorg. Med. Chem., 26, 2018
5XMJ
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Crystal structure of quinol:fumarate reductase from Desulfovibrio gigas
分子名称: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Guan, H.H, Hsieh, Y.C, Lin, P.R, Chen, C.J.
登録日2017-05-15
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural insights into the electron/proton transfer pathways in the quinol:fumarate reductase from Desulfovibrio gigas.
Sci Rep, 8, 2018
2YZ1
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Crystal structure of the ligand-binding domain of murine SHPS-1/SIRP alpha
分子名称: Tyrosine-protein phosphatase non-receptor type substrate 1
著者Nakaishi, A.
登録日2007-05-02
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insight into the specific interaction between murine SHPS-1/SIRP alpha and its ligand CD47
J.Mol.Biol., 375, 2008
2DF7
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BU of 2df7 by Molmil
Crystal structure of infectious bursal disease virus VP2 subviral particle
分子名称: CALCIUM ION, CHLORIDE ION, structural polyprotein VP2
著者Ko, T.P, Lee, C.C, Wang, M.Y, Wang, A.H.
登録日2006-02-27
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of infectious bursal disease virus VP2 subviral particle at 2.6A resolution: Implications in virion assembly and immunogenicity.
J.Struct.Biol., 155, 2006

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