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8E22
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BU of 8e22 by Molmil
VPS37A_21-148
分子名称: Vacuolar protein sorting-associated protein 37A
著者Tian, F, Ye, Y.S.
登録日2022-08-12
公開日2023-08-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Identification of membrane curvature sensing motifs essential for VPS37A phagophore recruitment and autophagosome closure.
Commun Biol, 7, 2024
8FKM
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BU of 8fkm by Molmil
Human Atg3 with deletions of residues 1 to 25 and 90 to 190
分子名称: Ubiquitin-like-conjugating enzyme ATG3
著者Ye, Y.S, Tian, F.
登録日2022-12-21
公開日2023-09-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Multifaceted membrane interactions of human Atg3 promote LC3-phosphatidylethanolamine conjugation during autophagy.
Nat Commun, 14, 2023
6KNE
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BU of 6kne by Molmil
The C-terminal Domain of Translation Initiation Factor 5 at high pH
分子名称: Translation initiation factor eIF5
著者Jian, Y, YuXin, Y, Min, Y.
登録日2019-08-05
公開日2020-06-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献The pH-dependent conformational change of eukaryotic translation initiation factor 5: Insights into partner-binding manner.
Biochem.Biophys.Res.Commun., 519, 2019
6KND
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BU of 6knd by Molmil
The C-terminal Domain of Translation Initiation Factor 5 at low pH
分子名称: Translation initiation factor eIF5
著者Jian, Y, YuXin, Y, Min, Y.
登録日2019-08-05
公開日2020-06-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The pH-dependent conformational change of eukaryotic translation initiation factor 5: Insights into partner-binding manner.
Biochem.Biophys.Res.Commun., 519, 2019
6KW3
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BU of 6kw3 by Molmil
The ClassA RSC-Nucleosome Complex
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-09-05
公開日2019-11-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.13 Å)
主引用文献Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
6KW4
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BU of 6kw4 by Molmil
The ClassB RSC-Nucleosome Complex
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC3, ...
著者Ye, Y.P, Wu, H, Chen, K.J, Verma, N, Cairns, B, Gao, N, Chen, Z.C.
登録日2019-09-06
公開日2019-11-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (7.55 Å)
主引用文献Structure of the RSC complex bound to the nucleosome.
Science, 366, 2019
4WWR
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BU of 4wwr by Molmil
Crystal Structure of Bag6-Ubl4A Dimerization Domain
分子名称: Large proline-rich protein BAG6, Ubiquitin-like protein 4A
著者Mock, J.Y, Chartron, J.W, Clemons Jr, W.M.
登録日2014-11-12
公開日2014-12-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bag6 complex contains a minimal tail-anchor-targeting module and a mock BAG domain.
Proc.Natl.Acad.Sci.USA, 112, 2015
6IV9
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BU of 6iv9 by Molmil
the Cas13d binary complex
分子名称: Cas13d, MAGNESIUM ION, crRNA (50-MER)
著者Zhang, B, Ye, Y.M, Ye, W.W, OuYang, S.Y.
登録日2018-12-02
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Two HEPN domains dictate CRISPR RNA maturation and target cleavage in Cas13d.
Nat Commun, 10, 2019
6IV8
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BU of 6iv8 by Molmil
the selenomethionine(SeMet)-derived Cas13d binary complex
分子名称: MAGNESIUM ION, RNA (51-MER), RNA (53-MER), ...
著者Zhang, B, Ye, Y.M, Ye, W.W, OuYang, S.Y.
登録日2018-12-02
公開日2019-06-19
最終更新日2019-06-26
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Two HEPN domains dictate CRISPR RNA maturation and target cleavage in Cas13d.
Nat Commun, 10, 2019
6PVF
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BU of 6pvf by Molmil
Crystal structure of PhqK in complex with malbrancheamide B
分子名称: (5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
6PVH
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BU of 6pvh by Molmil
Crystal structure of PhqK in complex with paraherquamide K
分子名称: (7aS,12S,12aR,13aS)-3,3,12,14,14-pentamethyl-3,7,11,12,13,13a,14,15-octahydro-8H,10H-7a,12a-(epiminomethano)indolizino[6,7-h]pyrano[3,2-a]carbazol-16-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
6PVG
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BU of 6pvg by Molmil
Crystal structure of ligand free PhqK
分子名称: FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.709 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
6PVI
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BU of 6pvi by Molmil
Crystal structure of PhqK in complex with paraherquamide L
分子名称: (8aS,13S,13aR,14aS)-4,4,13,15,15-pentamethyl-12,13,14,14a,15,16-hexahydro-4H,8H,9H,11H-8a,13a-(epiminomethano)[1,4]dioxepino[2,3-a]indolizino[6,7-h]carbazol-17-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
6PVJ
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BU of 6pvj by Molmil
Crystal structure of PhqK in complex with malbrancheamide C
分子名称: (5aS,12aS,13aS)-9-bromo-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, FAD monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fraley, A.E, Smith, J.L, Sherman, D.H.
登録日2019-07-20
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Molecular Basis for Spirocycle Formation in the Paraherquamide Biosynthetic Pathway.
J.Am.Chem.Soc., 142, 2020
8GW4
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BU of 8gw4 by Molmil
SARS-CoV-2 Mpro 1-302/C145A in complex with peptide 8-1
分子名称: Replicase polyprotein 1ab, peptide 8-1
著者Liu, M, Huang, H.
登録日2022-09-16
公開日2023-08-23
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The S1'-S3' Pocket of the SARS-CoV-2 Main Protease Is Critical for Substrate Selectivity and Can Be Targeted with Covalent Inhibitors.
Angew.Chem.Int.Ed.Engl., 62, 2023
8GWS
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BU of 8gws by Molmil
SARS-CoV-2 Mpro 1-302 c145a in complex with peptide 4
分子名称: Replicase polyprotein 1ab, VAL-LYS-LEU-GLN-ALA-ILE-PHE-ARG
著者Liu, M, Fu, Z, Huang, H.
登録日2022-09-17
公開日2023-08-23
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The S1'-S3' Pocket of the SARS-CoV-2 Main Protease Is Critical for Substrate Selectivity and Can Be Targeted with Covalent Inhibitors.
Angew.Chem.Int.Ed.Engl., 62, 2023
2XK5
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BU of 2xk5 by Molmil
Crystal structure of K6-linked diubiquitin
分子名称: UBIQUITIN, ZINC ION
著者Virdee, S, Chin, J.W, Komander, D.
登録日2010-07-07
公開日2010-08-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Engineered Diubiquitin Synthesis Reveals K29-Isopeptide Specificity of an Otu Deubiquitinase
Nat.Chem.Biol., 6, 2010
6AU8
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BU of 6au8 by Molmil
1.8 angstrom crystal structure of the human Bag6-NLS & TRC35 complex
分子名称: GLYCEROL, Golgi to ER traffic protein 4 homolog, Large proline-rich protein BAG6
著者Mock, J.Y, Clemons Jr, W.M.
登録日2017-08-31
公開日2017-11-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for regulation of the nucleo-cytoplasmic distribution of Bag6 by TRC35.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3FSH
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BU of 3fsh by Molmil
Crystal structure of the ubiquitin conjugating enzyme Ube2g2 bound to the G2BR domain of ubiquitin ligase gp78
分子名称: Autocrine motility factor receptor, isoform 2, Ubiquitin-conjugating enzyme E2 G2
著者Tu, D, Brunger, A.T.
登録日2009-01-09
公開日2009-02-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Mechanistic insights into active site-associated polyubiquitination by the ubiquitin-conjugating enzyme Ube2g2.
Proc.Natl.Acad.Sci.USA, 106, 2009
8HGI
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BU of 8hgi by Molmil
Crystal structure of VNAR aGFP14 in complex with GFP
分子名称: GFP, VNAR aGFP14
著者Zheng, P, Zhu, C, Jin, T.
登録日2022-11-14
公開日2023-09-27
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Selection, identification and crystal structure of shark-derived single-domain antibodies against a green fluorescent protein.
Int.J.Biol.Macromol., 247, 2023
5KIY
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BU of 5kiy by Molmil
p97 ND1-A232E in complex with VIMP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ...
著者Tang, W.K, Xia, D.
登録日2016-06-17
公開日2017-12-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural basis for nucleotide-modulated p97 association with the ER membrane.
Cell Discov, 3, 2017
5KIU
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BU of 5kiu by Molmil
VCP-interacting membrane protein (VIMP)
分子名称: Selenoprotein S
著者Tang, W.K, Xia, D.
登録日2016-06-17
公開日2017-12-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for nucleotide-modulated p97 association with the ER membrane.
Cell Discov, 3, 2017
5L79
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BU of 5l79 by Molmil
Crystal structure of MMP12 in complex with RXP470.1 conjugated with fluorophore Cy5,5 in space group P21212.
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CY5.5-PEG2, ...
著者Tepshi, L, Bordenave, T, Devel, L, Dive, V, Stura, E.A.
登録日2016-06-02
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Synthesis and in Vitro and in Vivo Evaluation of MMP-12 Selective Optical Probes.
Bioconjug.Chem., 27, 2016
5L7F
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BU of 5l7f by Molmil
Crystal structure of MMP12 mutant K421A in complex with RXP470.1 conjugated with fluorophore Cy5,5 in space group P21.
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, CALCIUM ION, ...
著者Tepshi, L, Bordenave, T, Rouanet-Mehouas, C, Devel, L, Dive, V, Stura, E.A.
登録日2016-06-03
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis and in Vitro and in Vivo Evaluation of MMP-12 Selective Optical Probes.
Bioconjug.Chem., 27, 2016
5GW0
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BU of 5gw0 by Molmil
Crystal structure of SNX16 PX-Coiled coil
分子名称: Sorting nexin-16
著者Xu, J, Liu, J.
登録日2016-09-08
公開日2017-09-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献SNX16 Regulates the Recycling of E-Cadherin through a Unique Mechanism of Coordinated Membrane and Cargo Binding.
Structure, 25, 2017

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