Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1JMK
DownloadVisualize
BU of 1jmk by Molmil
Structural Basis for the Cyclization of the Lipopeptide Antibiotic Surfactin by the Thioesterase Domain SrfTE
分子名称: SULFATE ION, Surfactin Synthetase
著者Bruner, S.D, Weber, T, Kohli, R.M, Schwarzer, D, Marahiel, M.A, Walsh, C.T, Stubbs, M.T.
登録日2001-07-18
公開日2002-03-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural basis for the cyclization of the lipopeptide antibiotic surfactin by the thioesterase domain SrfTE.
Structure, 10, 2002
1RRV
DownloadVisualize
BU of 1rrv by Molmil
X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin.
分子名称: DESVANCOSAMINYL VANCOMYCIN, GLYCEROL, GLYCOSYLTRANSFERASE GTFD, ...
著者Mulichak, A.M, Lu, W, Losey, H.C, Walsh, C.T, Garavito, R.M.
登録日2003-12-09
公開日2004-05-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Vancosaminyltransferase Gtfd from the Vancomycin Biosynthetic Pathway: Interactions with Acceptor and Nucleotide Ligands
Biochemistry, 43, 2004
5T7Z
DownloadVisualize
BU of 5t7z by Molmil
Monoclinic crystal form of the EpoB NRPS cyclization-docking bidomain from Sorangium cellulosum
分子名称: EpoB
著者Dowling, D.P, Kung, Y, Croft, A.K, Taghizadeh, K, Kelly, W.L, Walsh, C.T, Drennan, C.L.
登録日2016-09-06
公開日2016-11-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural elements of an NRPS cyclization domain and its intermodule docking domain.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T81
DownloadVisualize
BU of 5t81 by Molmil
Rhombohedral crystal form of the EpoB NRPS cyclization-docking bidomain from Sorangium cellulosum
分子名称: EpoB, GLYCEROL
著者Dowling, D.P, Kung, Y, Croft, A.K, Taghizadeh, K, Kelly, W.L, Walsh, C.T, Drennan, C.L.
登録日2016-09-06
公開日2016-11-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Structural elements of an NRPS cyclization domain and its intermodule docking domain.
Proc.Natl.Acad.Sci.USA, 113, 2016
4EIP
DownloadVisualize
BU of 4eip by Molmil
Native and K252c bound RebC-10x
分子名称: 6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazol-5-one, FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-monooxygenase
著者Goldman, P.J, Ryan, K.S, Howard-Jones, A.R, Hamill, M.J, Elliott, S.J, Walsh, C.T, Drennan, C.L.
登録日2012-04-05
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.332 Å)
主引用文献An Unusual Role for a Mobile Flavin in StaC-like Indolocarbazole Biosynthetic Enzymes.
Chem.Biol., 19, 2012
2LIU
DownloadVisualize
BU of 2liu by Molmil
NMR structure of holo-ACPI domain from CurA module from Lyngbya majuscula
分子名称: CurA
著者Busche, A.E, Gottstein, D, Hein, C, Ripin, N, Pader, I, Tufar, P, Eisman, E.B, Gu, L, Walsh, C.T, Loehr, F, Sherman, D.H, Guntert, P, Dotsch, V.
登録日2011-09-01
公開日2011-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Characterization of Molecular Interactions between ACP and Halogenase Domains in the Curacin A Polyketide Synthase.
Acs Chem.Biol., 7, 2012
2MLP
DownloadVisualize
BU of 2mlp by Molmil
MICROCIN LEADER PEPTIDE FROM E. COLI, NMR, 25 STRUCTURES
分子名称: MCBA PROPEPTIDE
著者Kim, S, Sinha Roy, R, Walsh, C.T, Baleja, J.D.
登録日1998-01-21
公開日1998-07-22
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Role of the microcin B17 propeptide in substrate recognition: solution structure and mutational analysis of McbA1-26.
Chem.Biol., 5, 1998
2LIW
DownloadVisualize
BU of 2liw by Molmil
NMR structure of HMG-ACPI domain from CurA module from Lyngbya majuscula
分子名称: 3-HYDROXY-3-METHYL-GLUTARIC ACID, 4'-PHOSPHOPANTETHEINE, CurA
著者Busche, A.E, Gottstein, D, Hein, C, Ripin, N, Pader, I, Tufar, P, Eisman, E.B, Gu, L, Walsh, C.T, Loehr, F, Sherman, D.H, Guntert, P, Dotsch, V.
登録日2011-09-01
公開日2011-12-21
最終更新日2012-03-14
実験手法SOLUTION NMR
主引用文献Characterization of Molecular Interactions between ACP and Halogenase Domains in the Curacin A Polyketide Synthase.
Acs Chem.Biol., 7, 2012
2ISJ
DownloadVisualize
BU of 2isj by Molmil
BluB bound to oxidized FMN
分子名称: BluB, FLAVIN MONONUCLEOTIDE
著者Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
登録日2006-10-17
公開日2007-03-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
2ISL
DownloadVisualize
BU of 2isl by Molmil
BluB bound to reduced flavin (FMNH2) and molecular oxygen. (clear crystal form)
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, BluB, OXYGEN MOLECULE
著者Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
登録日2006-10-17
公開日2007-03-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
2ISK
DownloadVisualize
BU of 2isk by Molmil
BluB bound to flavin anion (charge transfer complex)
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, BluB
著者Larsen, N.A, Taga, M.E, Howard-Jones, A.R, Walsh, C.T, Walker, G.C.
登録日2006-10-17
公開日2007-03-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献BluB cannibalizes flavin to form the lower ligand of vitamin B12.
Nature, 446, 2007
2GZR
DownloadVisualize
BU of 2gzr by Molmil
Enterobactin and Salmochelin Hydrolase IroE
分子名称: IroE protein
著者Larsen, N.A, Walsh, C.T.
登録日2006-05-11
公開日2006-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Characterization of Enterobactin Hydrolase IroE.
Biochemistry, 45, 2006
2GZS
DownloadVisualize
BU of 2gzs by Molmil
Enterobactin Hydolase IroE Complex with DFP
分子名称: DIISOPROPYL PHOSPHONATE, IroE protein
著者Larsen, N.A, Walsh, C.T.
登録日2006-05-12
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Characterization of Enterobactin Hydrolase IroE.
Biochemistry, 45, 2006
2K2Q
DownloadVisualize
BU of 2k2q by Molmil
complex structure of the external thioesterase of the Surfactin-synthetase with a carrier domain
分子名称: Surfactin synthetase thioesterase subunit, Tyrocidine synthetase 3 (Tyrocidine synthetase III)
著者Koglin, A, Lohr, F, Bernhard, F, Rogov, V.V, Frueh, D.P, Strieter, E.R, Mofid, M.R, Guntert, P, Wagner, G, Walsh, C.T, Marahiel, M.A, Dotsch, V.
登録日2008-04-10
公開日2008-12-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the selectivity of the external thioesterase of the surfactin synthetase.
Nature, 454, 2008
1L5A
DownloadVisualize
BU of 1l5a by Molmil
Crystal Structure of VibH, an NRPS Condensation Enzyme
分子名称: amide synthase
著者Keating, T.A, Marshall, C.G, Walsh, C.T, Keating, A.E.
登録日2002-03-06
公開日2002-06-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The structure of VibH represents nonribosomal peptide synthetase condensation, cyclization and epimerization domains.
Nat.Struct.Biol., 9, 2002
2E4G
DownloadVisualize
BU of 2e4g by Molmil
RebH with bound L-Trp
分子名称: TRYPTOPHAN, Tryptophan halogenase
著者Blasiak, L.C, Drennan, C.L.
登録日2006-12-07
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Chlorination by a long-lived intermediate in the mechanism of flavin-dependent halogenases
Biochemistry, 46, 2007
1IOW
DownloadVisualize
BU of 1iow by Molmil
COMPLEX OF Y216F D-ALA:D-ALA LIGASE WITH ADP AND A PHOSPHORYL PHOSPHINATE
分子名称: 1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID, ADENOSINE-5'-DIPHOSPHATE, D-ALA:D-ALA LIGASE, ...
著者Knox, J.R, Moews, P.C, Fan, C.
登録日1996-09-20
公開日1997-02-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates with wild type and the Y216F mutant.
Biochemistry, 36, 1997
1IOV
DownloadVisualize
BU of 1iov by Molmil
COMPLEX OF D-ALA:D-ALA LIGASE WITH ADP AND A PHOSPHORYL PHOSPHONATE
分子名称: 2-[(1-AMINO-ETHYL)-PHOSPHATE-PHOSPHINOYLOXY]-BUTYRIC ACID, ADENOSINE-5'-DIPHOSPHATE, D-ALA:D-ALA LIGASE, ...
著者Knox, J.R, Moews, P.C, Fan, C.
登録日1996-09-20
公開日1997-02-12
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates with wild type and the Y216F mutant.
Biochemistry, 36, 1997
4TM4
DownloadVisualize
BU of 4tm4 by Molmil
Kutzneria sp. 744 ornithine N-hydroxylase, KtzI-FADox-red-NADP+-Br
分子名称: BROMIDE ION, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, KtzI, ...
著者Setser, J.W, Drennan, C.L.
登録日2014-05-30
公開日2014-09-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.632 Å)
主引用文献Crystallographic Evidence of Drastic Conformational Changes in the Active Site of a Flavin-Dependent N-Hydroxylase.
Biochemistry, 53, 2014
1A2N
DownloadVisualize
BU of 1a2n by Molmil
STRUCTURE OF THE C115A MUTANT OF MURA COMPLEXED WITH THE FLUORINATED ANALOG OF THE REACTION TETRAHEDRAL INTERMEDIATE
分子名称: UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL-3-FLUORO-2-PHOSPHONOOXY)PROPIONIC ACID
著者Skarzynski, T.
登録日1998-01-06
公開日1998-04-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Stereochemical course of enzymatic enolpyruvyl transfer and catalytic conformation of the active site revealed by the crystal structure of the fluorinated analogue of the reaction tetrahedral intermediate bound to the active site of the C115A mutant of MurA
Biochemistry, 37, 1998
4Z2Y
DownloadVisualize
BU of 4z2y by Molmil
Crystal structure of methyltransferase CalO6
分子名称: CalO6, MERCURY (II) ION
著者Hou, C, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2015-03-30
公開日2015-07-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of O-methyltransferase CalO6 from the calicheamicin biosynthetic pathway: a case of challenging structure determination at low resolution.
Bmc Struct.Biol., 15, 2015
1UAE
DownloadVisualize
BU of 1uae by Molmil
STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE
分子名称: UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, [(1R)-1-hydroxypropyl]phosphonic acid
著者Skarzynski, T.
登録日1996-09-30
公開日1997-09-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of UDP-N-acetylglucosamine enolpyruvyl transferase, an enzyme essential for the synthesis of bacterial peptidoglycan, complexed with substrate UDP-N-acetylglucosamine and the drug fosfomycin.
Structure, 4, 1996
1OI6
DownloadVisualize
BU of 1oi6 by Molmil
Structure determination of the TMP-complex of EvaD
分子名称: GLYCEROL, PCZA361.16, THYMIDINE-5'-PHOSPHATE
著者Merkel, A.B, Naismith, J.H.
登録日2003-06-09
公開日2004-06-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Position of a Key Tyrosine in Dtdp-4-Keto-6-Deoxy-D-Glucose-5-Epimerase (Evad) Alters the Substrate Profile for This Rmlc-Like Enzyme
J.Biol.Chem., 279, 2004
2DLN
DownloadVisualize
BU of 2dln by Molmil
VANCOMYCIN RESISTANCE: STRUCTURE OF D-ALANINE:D-ALANINE LIGASE AT 2.3 ANGSTROMS RESOLUTION
分子名称: 1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE--D-ALANINE LIGASE, ...
著者Knox, J.R, Moews, P.C, Fan, C.
登録日1994-07-18
公開日1995-11-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution.
Science, 266, 1994
3GJB
DownloadVisualize
BU of 3gjb by Molmil
CytC3 with Fe(II) and alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, ACETATE ION, CytC3, ...
著者Wong, C, Drennan, C.L.
登録日2009-03-08
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon