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2EB5
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BU of 2eb5 by Molmil
Crystal structure of HpcG complexed with oxalate
分子名称: 2-oxo-hept-3-ene-1,7-dioate hydratase, MAGNESIUM ION, OXALATE ION, ...
著者Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H.
登録日2007-02-07
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli
J.Mol.Biol., 370, 2007
2EB6
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BU of 2eb6 by Molmil
Crystal structure of HpcG complexed with Mg ion
分子名称: 2-oxo-hept-3-ene-1,7-dioate hydratase, MAGNESIUM ION
著者Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H.
登録日2007-02-07
公開日2007-07-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli
J.Mol.Biol., 370, 2007
2EX2
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BU of 2ex2 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli
分子名称: GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-07
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EXA
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BU of 2exa by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with FAROM
分子名称: (2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EX8
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BU of 2ex8 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with penicillin-G
分子名称: OPEN FORM - PENICILLIN G, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EX9
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BU of 2ex9 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with penicillin-V
分子名称: (2R,4S)-5,5-dimethyl-2-{(1R)-2-oxo-1-[(phenoxyacetyl)amino]ethyl}-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EXB
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BU of 2exb by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with FLOMOX
分子名称: 2,2-dimethylpropanoyloxymethyl (2R)-5-(aminocarbonyloxymethyl)-2-[(1R)-1-[[(Z)-2-(2-azanyl-1,3-thiazol-4-yl)pent-2-enoyl]amino]-2-oxidanylidene-ethyl]-3,6-dihydro-2H-1,3-thiazine-4-carboxylate, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EX6
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BU of 2ex6 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with ampicillin
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
3WWF
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BU of 3wwf by Molmil
Crystal structure of the computationally designed Pizza2-SR protein
分子名称: pizza2sr-pb protein
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWB
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BU of 3wwb by Molmil
Crystal structure of the computationally designed Pizza2-SR protein
分子名称: Pizza2-SR protein
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW9
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BU of 3ww9 by Molmil
Crystal structure of the computationally designed Pizza6 protein
分子名称: GLYCEROL, SULFATE ION, pizza6 protein
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW7
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BU of 3ww7 by Molmil
Crystal structure of the computationally designed Pizza2 protein
分子名称: GLYCEROL, Pizza2 protein
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WMU
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BU of 3wmu by Molmil
The structure of an anti-cancer lectin mytilec apo-form from the mussel Mytilus galloprovincialis
分子名称: GLYCEROL, Lectin
著者Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H.
登録日2013-11-27
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types
Sci Rep, 6, 2016
3WW8
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BU of 3ww8 by Molmil
Crystal structure of the computationally designed Pizza3 protein
分子名称: GLYCEROL, Pizza3 protein, SULFATE ION
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWA
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BU of 3wwa by Molmil
Crystal structure of the computationally designed Pizza7 protein after heat treatment
分子名称: ISOPROPYL ALCOHOL, Pizza7H protein
著者Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
登録日2014-06-17
公開日2014-10-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.988 Å)
主引用文献Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WMV
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BU of 3wmv by Molmil
The structure of an anti-cancer lectin mytilec with ligand from the mussel Mytilus galloprovincialis
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Lectin
著者Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H.
登録日2013-11-27
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types
Sci Rep, 6, 2016
3X1Y
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BU of 3x1y by Molmil
Ras-related protein Rap1B(L9V) with GppNHp
分子名称: CADMIUM ION, GLYCEROL, MAGNESIUM ION, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.168 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1X
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BU of 3x1x by Molmil
Ras-related protein Rap1B with GppNHp
分子名称: CADMIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1Z
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BU of 3x1z by Molmil
Ras-related protein Rap1B(T65A) with GppNHp
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
登録日2014-12-02
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3AUP
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BU of 3aup by Molmil
Crystal structure of Basic 7S globulin from soybean
分子名称: Basic 7S globulin
著者Yoshizawa, T, Shimizu, T, Taichi, M, Nishiuchi, Y, Yamabe, M, Shichijo, N, Unzai, S, Hirano, H, Sato, M, Hashimoto, H.
登録日2011-02-14
公開日2011-04-27
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of basic 7S globulin, a xyloglucan-specific endo-beta-1,4-glucanase inhibitor protein-like protein from soybean lacking inhibitory activity against endo-beta-glucanase
Febs J., 278, 2011
5F53
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BU of 5f53 by Molmil
Nano-ring of cadmium ions coordinated by nvPizza2-S16S58
分子名称: CADMIUM ION, CHLORIDE ION, NVPIZZA2-S16S58
著者Voet, A.R.D, Tame, J.R.H.
登録日2015-12-04
公開日2016-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A cadmium chloride ring created by a designed symmetrical protein
To Be Published
4F15
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BU of 4f15 by Molmil
Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
分子名称: Fab fragment, heavy chain, light chain, ...
著者Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
登録日2012-05-06
公開日2013-05-15
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
To be Published
5XQY
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BU of 5xqy by Molmil
Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 8
分子名称: Immunoglobulin kappa variable 1D-33
著者Mine, S, Nakamura, T, Uegaki, K, Hamada, D.
登録日2017-06-07
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Heat-induced native dimerization prevents amyloid formation by variable domain from immunoglobulin light-chain REI
FEBS J., 284, 2017
5XP1
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BU of 5xp1 by Molmil
Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 6
分子名称: Immunoglobulin kappa variable 1D-33
著者Mine, S, Nakamura, T, Uegaki, K, Hamada, D.
登録日2017-05-31
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Heat-induced native dimerization prevents amyloid formation by variable domain from immunoglobulin light-chain REI
FEBS J., 284, 2017
4EDA
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BU of 4eda by Molmil
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
登録日2012-03-27
公開日2013-05-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Insight into structural diversity of influenza virus haemagglutinin
J.Gen.Virol., 94, 2013

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