Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5X3J
DownloadVisualize
BU of 5x3j by Molmil
Kfla1895 D451A mutant in complex with cyclobis-(1->6)-alpha-nigerosyl
分子名称: Cyclic alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, GLYCEROL, Glycoside hydrolase family 31, ...
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2017-02-06
公開日2018-02-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Glycoside hydrolase mutant in complex with substrate
To Be Published
5X3I
DownloadVisualize
BU of 5x3i by Molmil
Kfla1895 D451A mutant
分子名称: GLYCEROL, Glycoside hydrolase family 31, SULFATE ION
著者Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A.
登録日2017-02-06
公開日2018-02-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Glycoside hydrolase mutant
To Be Published
1WUQ
DownloadVisualize
BU of 1wuq by Molmil
Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP
分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WM9
DownloadVisualize
BU of 1wm9 by Molmil
Structure of GTP cyclohydrolase I from Thermus thermophilus HB8
分子名称: GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-05
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel Reaction Mechanism of GTP Cyclohydrolase I. High-Resolution X-Ray Crystallography of Thermus thermophilus HB8 Enzyme Complexed with a Transition State Analogue, the 8-Oxoguanine Derivative.
J.Biochem.(Tokyo), 138, 2005
1WUR
DownloadVisualize
BU of 1wur by Molmil
Structure of GTP cyclohydrolase I Complexed with 8-oxo-dGTP
分子名称: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
2D63
DownloadVisualize
BU of 2d63 by Molmil
Aspartate Aminotransferase Mutant MA With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D5Y
DownloadVisualize
BU of 2d5y by Molmil
Aspartate Aminotransferase Mutant MC With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-08
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D7Y
DownloadVisualize
BU of 2d7y by Molmil
Aspartate Aminotransferase Mutant MA
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-30
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D66
DownloadVisualize
BU of 2d66 by Molmil
Aspartate Aminotransferase Mutant MAB
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D7Z
DownloadVisualize
BU of 2d7z by Molmil
Aspartate Aminotransferase Mutant MAB Complexed with Maleic Acid
分子名称: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-30
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D65
DownloadVisualize
BU of 2d65 by Molmil
Aspartate Aminotransferase Mutant MABC
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D64
DownloadVisualize
BU of 2d64 by Molmil
Aspartate Aminotransferase Mutant MABC With Isovaleric Acid
分子名称: Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D61
DownloadVisualize
BU of 2d61 by Molmil
Aspartate Aminotransferase Mutant MA With Maleic Acid
分子名称: Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-08
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
3VVP
DownloadVisualize
BU of 3vvp by Molmil
Crystal structure of MATE in complex with Br-NRF
分子名称: 6-bromo-1-ethyl-4-oxo-7-(piperazin-1-yl)-1,4-dihydroquinoline-3-carboxylic acid, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VVR
DownloadVisualize
BU of 3vvr by Molmil
Crystal structure of MATE in complex with MaD5
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VVS
DownloadVisualize
BU of 3vvs by Molmil
Crystal structure of MATE in complex with MaD3S
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VVO
DownloadVisualize
BU of 3vvo by Molmil
Crystal structure of MATE in the bent conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VVN
DownloadVisualize
BU of 3vvn by Molmil
Crystal structure of MATE in the straight conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3WBN
DownloadVisualize
BU of 3wbn by Molmil
Crystal structure of MATE in complex with MaL6
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MaL6, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2013-05-20
公開日2013-06-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3W4T
DownloadVisualize
BU of 3w4t by Molmil
Crystal structure of MATE P26A mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2013-01-16
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3IS1
DownloadVisualize
BU of 3is1 by Molmil
Crystal structure of functional region of UafA from Staphylococcus saprophyticus in C2 form at 2.45 angstrom resolution
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Matsuoka, E, Shouji, Y, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding
Protein Sci., 20, 2011
3IS0
DownloadVisualize
BU of 3is0 by Molmil
Crystal structure of functional region of UafA from Staphylococcus saprophyticus in the presence of cholesterol
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Shouji, Y, Matsuoka, E, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of Functional Region of UafA from Staphylococcus saprophyticus
To be Published
3IRP
DownloadVisualize
BU of 3irp by Molmil
Crystal structure of functional region of UafA from Staphylococcus saprophyticus at 1.50 angstrom resolution
分子名称: GLYCEROL, POTASSIUM ION, Uro-adherence factor A
著者Tanaka, Y, Shouji, Y, Matsuoka, E, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding
Protein Sci., 20, 2011
3IRZ
DownloadVisualize
BU of 3irz by Molmil
Crystal structure of functional region of UafA from Staphylococcus saprophyticus in P212121 form
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Shouji, Y, Matsuoka, E, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding
Protein Sci., 20, 2011
5ZTB
DownloadVisualize
BU of 5ztb by Molmil
Structure of Sulfurtransferase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Tanaka, Y, Chen, M, Narai, S, Yao, M.
登録日2018-05-02
公開日2019-06-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The [4Fe-4S] cluster of sulfurtransferase TtuA desulfurizes TtuB during tRNA modification in Thermus thermophilus.
Commun Biol, 3, 2020

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon