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7VS9
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BU of 7vs9 by Molmil
Crystal structure of P domain from norovirus GI.9 capsid protein in complex with Lewis x antigen.
分子名称: CHLORIDE ION, MAGNESIUM ION, VP1, ...
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-10-26
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis.
Febs Open Bio, 12, 2022
7VS8
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BU of 7vs8 by Molmil
Crystal structure of P domain from norovirus GI.9 capsid protein in complex with Lewis b antigen.
分子名称: CHLORIDE ION, MAGNESIUM ION, VP1, ...
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-10-26
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis.
Febs Open Bio, 12, 2022
7CD1
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BU of 7cd1 by Molmil
Crystal structure of inhibitory Smad, Smad7
分子名称: CHLORIDE ION, Mothers against decapentaplegic homolog 7, SULFATE ION
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2020-06-18
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for inhibitory effects of Smad7 on TGF-beta family signaling.
J.Struct.Biol., 212, 2020
1WEK
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BU of 1wek by Molmil
Crystal structure of the conserved hypothetical protein TT1465 from Thermus thermophilus HB8
分子名称: PHOSPHATE ION, hypothetical protein TT1465
著者Kukimoto-Niino, M, Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-25
公開日2004-11-25
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8
Protein Sci., 13, 2004
1WDV
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BU of 1wdv by Molmil
Crystal structure of hypothetical protein APE2540
分子名称: hypothetical protein APE2540
著者Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-18
公開日2004-11-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
7EJL
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BU of 7ejl by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-2) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
7EJN
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BU of 7ejn by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-HKU1) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
7EJM
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BU of 7ejm by Molmil
Complex Structure of HLA-A*2402 with the Peptide from HCoV(CoV-229E) spike protein
分子名称: 9-mer peptide from the HCoV spike protein, Beta-2-microglobulin, MHC class I antigen
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2021-04-02
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Identification of TCR repertoires in functionally competent cytotoxic T cells cross-reactive to SARS-CoV-2.
Commun Biol, 4, 2021
1UF3
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BU of 1uf3 by Molmil
Crystal structure of TT1561 of thermus thermophilus HB8
分子名称: CALCIUM ION, hypothetical protein TT1561
著者Kato-Murayama, M, Shirouzu, M, Terada, T, Murayama, K, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-23
公開日2003-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of TT1561 of thermus thermophilus HB8
To be Published
5Y7Z
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BU of 5y7z by Molmil
Complex structure of cyclin G-associated kinase with gefitinib
分子名称: Cyclin-G-associated kinase, Gefitinib, NANOBODY, ...
著者Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2017-08-18
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.
ChemistryOpen, 7, 2018
5Y80
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BU of 5y80 by Molmil
Complex structure of cyclin G-associated kinase with gefitinib
分子名称: Cyclin-G-associated kinase, Gefitinib, NANOBODY
著者Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2017-08-18
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.
ChemistryOpen, 7, 2018
1WD6
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BU of 1wd6 by Molmil
crystal structure of JW1657 from Escherichia coli
分子名称: Protein ydhR
著者Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-12
公開日2004-11-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献crystal structure of JW1657 from Escherichia coli
To be Published
1WFX
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BU of 1wfx by Molmil
Crystal Structure of APE0204 from Aeropyrum pernix
分子名称: CHLORIDE ION, Probable RNA 2'-phosphotransferase, ZINC ION
著者Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-27
公開日2004-11-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the RNA 2'-Phosphotransferase from Aeropyrum pernix K1
J.Mol.Biol., 348, 2005
5C2K
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BU of 5c2k by Molmil
Crystal structure of the fusion protein linked by RhoA and the GAP domain of MgcRacGAP
分子名称: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M.
登録日2015-06-16
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural basis of G-protein target alternation of MgcRacGAP by phospholylation
To Be Published
5C2J
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BU of 5c2j by Molmil
Complex structure of the GAP domain of MgcRacGAP and Cdc42
分子名称: ALUMINUM FLUORIDE, Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, ...
著者Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M.
登録日2015-06-16
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of G-protein target alternation of MgcRacGAP by phospholylation
To Be Published
4YN3
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BU of 4yn3 by Molmil
Crystal structure of Cucumisin complex with pro-peptide
分子名称: CHLORIDE ION, Cucumisin, DI(HYDROXYETHYL)ETHER, ...
著者Murayama, K, Kato-Murayama, M, Yokoyama, S, Arima, K, Shirouzu, M.
登録日2015-03-09
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis of cucumisin protease activity regulation by its propeptide
J. Biochem., 161, 2017
2Z0O
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BU of 2z0o by Molmil
Crystal structure of APPL1-BAR-PH domain
分子名称: DCC-interacting protein 13-alpha
著者Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2008-05-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal structure of APPL1-BAR-PH domain
To be Published
2Z0V
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BU of 2z0v by Molmil
Crystal structure of BAR domain of Endophilin-III
分子名称: SH3-containing GRB2-like protein 3
著者Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2008-05-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of BAR domain of Endophilin-III
To be Published
2Z0Z
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BU of 2z0z by Molmil
Crystal structure of putative acetyltransferase
分子名称: Putative uncharacterized protein TTHA1799, SULFATE ION
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
2Z0T
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BU of 2z0t by Molmil
Crystal structure of hypothetical protein PH0355
分子名称: Putative uncharacterized protein PH0355
著者Murayama, K, Takemoto, C, Kato-Murayama, M, Kawazoe, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of hypothetical protein PH0355
To be Published
2Z10
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BU of 2z10 by Molmil
Crystal structure of putative acetyltransferase
分子名称: Ribosomal-protein-alanine acetyltransferase
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
2ZXV
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BU of 2zxv by Molmil
Crystal structure of putative acetyltransferase from T. thermophilus HB8
分子名称: Putative uncharacterized protein TTHA1799
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-08
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
1YMW
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BU of 1ymw by Molmil
The study of reductive unfolding pathways of RNase A (Y92G mutant)
分子名称: Ribonuclease pancreatic
著者Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
登録日2005-01-21
公開日2006-01-31
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1YMR
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BU of 1ymr by Molmil
The study of reductive unfolding pathways of RNase A (Y92A mutant)
分子名称: Ribonuclease pancreatic
著者Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
登録日2005-01-21
公開日2006-01-31
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1YMN
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BU of 1ymn by Molmil
The study of reductive unfolding pathways of RNase A (Y92L mutant)
分子名称: Ribonuclease pancreatic
著者Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
登録日2005-01-21
公開日2006-01-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006

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