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4MNP
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BU of 4mnp by Molmil
Structure of the Sialic Acid Binding Protein from Fusobacterium Nucleatum subsp. nucleatum ATCC 25586
分子名称: N-acetyl-beta-neuraminic acid, N-acetylneuraminate-binding protein
著者Thanuja, G, Ramaswamy, S.
登録日2013-09-11
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Bacterial periplasmic sialic acid-binding proteins exhibit a conserved binding site.
Acta Crystallogr.,Sect.D, 70, 2014
1YE3
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BU of 1ye3 by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE APOENZYME
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Alcohol dehydrogenase E chain, ZINC ION
著者Plapp, B.V, Savarimuthu, B.R, Ramaswamy, S.
登録日2004-12-27
公開日2005-01-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Horse Liver Alcohol Dehydrogenase Apoenzyme
To be Published
2GBW
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BU of 2gbw by Molmil
Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1
分子名称: Biphenyl 2,3-Dioxygenase Alpha Subunit, Biphenyl 2,3-Dioxygenase Beta Subunit, FE (III) ION, ...
著者Ferraro, D.J, Brown, E.N, Yu, C, Parales, R.E, Gibson, D.T, Ramaswamy, S.
登録日2006-03-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Bmc Struct.Biol., 7, 2007
2GBR
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BU of 2gbr by Molmil
Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitin
分子名称: CADMIUM ION, Ubiquitin
著者Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D.
登録日2006-03-10
公開日2006-05-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis.
J.Mol.Biol., 359, 2006
2GBX
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BU of 2gbx by Molmil
Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1 Bound to Biphenyl
分子名称: BIPHENYL, Biphenyl 2,3-Dioxygenase Alpha Subunit, Biphenyl 2,3-Dioxygenase Beta Subunit, ...
著者Ferraro, D.J, Brown, E.N, Yu, C, Parales, R.E, Gibson, D.T, Ramaswamy, S.
登録日2006-03-12
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Bmc Struct.Biol., 7, 2007
6L44
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BU of 6l44 by Molmil
Monomeric structure of monellin loop1 mutant with QVPAG motif
分子名称: SULFATE ION, Single chain Monellin
著者Manjula, R, Ramaswamy, S, Gosavi, S.
登録日2019-10-16
公開日2021-04-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.492 Å)
主引用文献The monomer structure of Monellin Loop1 mutant
To Be Published
6L4N
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BU of 6l4n by Molmil
Domain swapped dimer of Monellin loop1 mutant with QVPAG motif
分子名称: MAGNESIUM ION, Single chain Monellin
著者Manjula, R, Ramaswamy, S, Gosavi, S.
登録日2019-10-18
公開日2021-04-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.431 Å)
主引用文献Domain swapped dimer of Monellin lopp1 mutant with QVPAG motif
To Be Published
6L4I
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BU of 6l4i by Molmil
Monomeric structure of monellin loop1 mutant with QEPKG motif
分子名称: Single chain Monellin
著者Manjula, R, Ramaswamy, S, Gosavi, S.
登録日2019-10-17
公開日2021-04-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Monomer structure of Loop1 mutant Monellin with QEPKG motif
To Be Published
6XT2
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BU of 6xt2 by Molmil
EQADH-NADH-HEPTAFLUOROBUTANOL, P21
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2,2,3,3,4,4,4-heptafluorobutan-1-ol, ...
著者Plapp, B.V, Ramaswamy, S.
登録日2020-07-16
公開日2020-08-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Alternative binding modes in abortive NADH-alcohol complexes of horse liver alcohol dehydrogenase.
Arch.Biochem.Biophys., 701, 2021
3L0X
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BU of 3l0x by Molmil
Structure of split yeast PCNA
分子名称: Proliferating cell nuclear antigen
著者Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T.
登録日2009-12-10
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange.
Nat.Struct.Mol.Biol., 17, 2010
3L0W
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BU of 3l0w by Molmil
Structure of split monoubiquitinated PCNA with ubiquitin in position two
分子名称: Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen
著者Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T.
登録日2009-12-10
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange.
Nat.Struct.Mol.Biol., 17, 2010
3L10
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BU of 3l10 by Molmil
Structure of split monoubiquitinated PCNA with ubiquitin in position one
分子名称: Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen
著者Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T.
登録日2009-12-10
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange.
Nat.Struct.Mol.Biol., 17, 2010
5VN1
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BU of 5vn1 by Molmil
horse liver alcohol dehydrogenae complexed with NADH (R,S)-N-1-methylhexylformamide
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (R)-N-(1-METHYL-HEXYL)-FORMAMIDE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
著者Plapp, B.V, Ramaswamy, S, Ferraro, D.J, Baskar Raj, S.
登録日2017-04-28
公開日2017-05-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.
Biochemistry, 56, 2017
1XSM
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BU of 1xsm by Molmil
PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE FROM MOUSE
分子名称: FE (III) ION, RIBONUCLEOTIDE REDUCTASE R2
著者Kauppi, B, Nielsen, B.N, Ramaswamy, S, Kjoller-Larsen, I, Thelander, M, Thelander, L, Eklund, H.
登録日1996-07-03
公開日1997-01-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2.
J.Mol.Biol., 262, 1996
3ODT
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BU of 3odt by Molmil
Crystal structure of WD40 beta propeller domain of Doa1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Protein DOA1
著者Pashkova, N, Gakhar, L, Winistorfer, S.C, Yu, L, Ramaswamy, S, Piper, R.C.
登録日2010-08-11
公開日2010-12-01
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献WD40 Repeat Propellers Define a Ubiquitin-Binding Domain that Regulates Turnover of F Box Proteins.
Mol.Cell, 40, 2010
5VL0
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BU of 5vl0 by Molmil
horse liver alcohol dehydrogenase complexed with NADH and N-benzyformamide
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase E chain, ...
著者Plapp, B.V, Brown, E.N, Ramaswamy, S, Baskar Raj, S.
登録日2017-04-24
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.
Biochemistry, 56, 2017
4DWV
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BU of 4dwv by Molmil
Horse alcohol dehydrogenase complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
著者Plapp, B.V, Ramaswamy, S.
登録日2012-02-26
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Atomic-Resolution Structures of Horse Liver Alcohol Dehydrogenase with NAD(+) and Fluoroalcohols Define Strained Michaelis Complexes.
Biochemistry, 51, 2012
3EN1
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BU of 3en1 by Molmil
Crystal structure of Toluene 2,3-Dioxygenase
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Benzene 1,2-dioxygenase subunit alpha, Benzene 1,2-dioxygenase subunit beta, ...
著者Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
登録日2008-09-25
公開日2009-03-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
3EF6
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BU of 3ef6 by Molmil
Crystal structure of Toluene 2,3-Dioxygenase Reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
登録日2008-09-08
公開日2009-03-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
3EQQ
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BU of 3eqq by Molmil
Apo Toluene 2,3-Dioxygenase
分子名称: Benzene 1,2-dioxygenase subunit alpha, Benzene 1,2-dioxygenase subunit beta, FE (II) ION, ...
著者Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
登録日2008-10-01
公開日2009-03-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
5NCK
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BU of 5nck by Molmil
The Crystal Structure of N-acetylmannosamine kinase in Fusobacterium nucleatum
分子名称: N-acetylmannosamine kinase
著者Caing-Carlsson, R, Sharma, A, Friemann, R, Ramaswamy, S.
登録日2017-03-06
公開日2017-06-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structure of N-acetylmannosamine kinase from Fusobacterium nucleatum.
Acta Crystallogr F Struct Biol Commun, 73, 2017
4NYQ
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BU of 4nyq by Molmil
In-vivo crystallisation (midguts of a viviparous cockroach) and structure at 1.2 A resolution of a glycosylated, lipid-binding, lipocalin-like protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Coussens, N.P, Gallat, F.-X, Ramaswamy, S, Yagi, K, Tobe, S.S, Stay, B, Chavas, L.M.G.
登録日2013-12-11
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata.
Iucrj, 3, 2016
4NYR
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In-vivo crystallisation (midguts of a viviparous cockroach) and structure at 2.5 A resolution of a glycosylated, lipid-binding, lipocalin-like protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Coussens, N.P, Gallat, F.-X, Ramaswamy, S, Yagi, K, Tobe, S.S, Stay, B, Chavas, L.M.G.
登録日2013-12-11
公開日2014-01-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata.
Iucrj, 3, 2016
5ENV
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BU of 5env by Molmil
YEAST ALCOHOL DEHYDROGENASE WITH BOUND COENZYME
分子名称: Alcohol dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Plapp, B.V, Charlier Jr, H.A, Ramaswamy, S.
登録日2015-11-09
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mechanistic implications from structures of yeast alcohol dehydrogenase complexed with coenzyme and an alcohol.
Arch.Biochem.Biophys., 591, 2015
1JU9
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BU of 1ju9 by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE VAL292SER MUTANT
分子名称: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Rubach, J.K, Ramaswamy, S, Plapp, B.V.
登録日2001-08-24
公開日2001-09-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Contributions of valine-292 in the nicotinamide binding site of liver alcohol dehydrogenase and dynamics to catalysis.
Biochemistry, 40, 2001

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