8OSB
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![BU of 8osb by Molmil](/molmil-images/mine/8osb) | TWIST1-TCF4-ALX4 complex on specific DNA | 分子名称: | DNA (25-MER), Homeobox protein aristaless-like 4, Transcription factor 4, ... | 著者 | Morgunova, E, Kim, S, Popov, A, Wysocka, J, Taipale, J. | 登録日 | 2023-04-18 | 公開日 | 2024-01-31 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | DNA-guided transcription factor cooperativity shapes face and limb mesenchyme. Cell, 187, 2024
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4E6B
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![BU of 4e6b by Molmil](/molmil-images/mine/4e6b) | |
5BNG
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![BU of 5bng by Molmil](/molmil-images/mine/5bng) | monomer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA | 分子名称: | DNA (5'-D(P*AP*AP*TP*TP*AP*GP*CP*TP*GP*TP*CP*A)-3'), DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A)-3'), DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A-3'), ... | 著者 | Morgunova, E, Jolma, A, Yin, Y, Nitta, K, Dave, K, Popov, A, Taipale, M, Enge, M, Kivioja, T, Taipale, J. | 登録日 | 2015-05-26 | 公開日 | 2015-11-04 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature, 527, 2015
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4E5C
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![BU of 4e5c by Molmil](/molmil-images/mine/4e5c) | |
7Q35
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![BU of 7q35 by Molmil](/molmil-images/mine/7q35) | Crystal structure of the mutant bacteriorhodopsin pressurized with krypton | 分子名称: | Bacteriorhodopsin, EICOSANE, HEXANE, ... | 著者 | Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. | 登録日 | 2021-10-27 | 公開日 | 2022-04-27 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
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7Q37
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![BU of 7q37 by Molmil](/molmil-images/mine/7q37) | Crystal structure of proton pump MAR rhodopsin pressurized with krypton | 分子名称: | Bacteriorhodopsin, EICOSANE, HEXANE, ... | 著者 | Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. | 登録日 | 2021-10-27 | 公開日 | 2022-04-27 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
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7Q38
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![BU of 7q38 by Molmil](/molmil-images/mine/7q38) | Crystal structure of the mutant bacteriorhodopsin pressurized with argon | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ARGON, Bacteriorhodopsin, ... | 著者 | Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. | 登録日 | 2021-10-27 | 公開日 | 2022-04-27 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
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7Q36
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![BU of 7q36 by Molmil](/molmil-images/mine/7q36) | Crystal structure of KR2 sodium pump rhodopsin pressurized with krypton | 分子名称: | EICOSANE, HEXANE, KRYPTON, ... | 著者 | Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. | 登録日 | 2021-10-27 | 公開日 | 2022-04-27 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
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4NY6
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![BU of 4ny6 by Molmil](/molmil-images/mine/4ny6) | Neutron structure of leucine and valine methyl protonated type III antifreeze | 分子名称: | Type-3 ice-structuring protein HPLC 12 | 著者 | Fisher, S.J, Blakeley, M.P, Howard, E.I, Petite-Haertlein, I, Haertlein, M, Mitschler, A, Cousido-Siah, A, Salvaya, A.G, Popov, A, Muller-Dieckmann, C, Petrova, T, Podjarny, A.D. | 登録日 | 2013-12-10 | 公開日 | 2014-12-24 | 最終更新日 | 2024-02-28 | 実験手法 | NEUTRON DIFFRACTION (1.05 Å), X-RAY DIFFRACTION | 主引用文献 | Perdeuteration: improved visualization of solvent structure in neutron macromolecular crystallography. Acta Crystallogr.,Sect.D, 70, 2014
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4OV0
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![BU of 4ov0 by Molmil](/molmil-images/mine/4ov0) | Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase | 分子名称: | Bacteriorhodopsin, RETINAL | 著者 | Polovinkin, V, Gushchin, I, Sintsov, M, Round, E, Balandin, T, Chervakov, P, Schevchenko, V, Utrobin, P, Popov, A, Borshchevskiy, V, Mishin, A, Kuklin, A, Willbold, D, Popot, J.L, Gordeliy, V. | 登録日 | 2014-02-19 | 公開日 | 2014-10-01 | 最終更新日 | 2017-11-22 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase. J.Membr.Biol., 247, 2014
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6EYU
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![BU of 6eyu by Molmil](/molmil-images/mine/6eyu) | Crystal structure of the inward H(+) pump xenorhodopsin | 分子名称: | Bacteriorhodopsin, EICOSANE, RETINAL, ... | 著者 | Kovalev, K, Shevchenko, V, Polovinkin, V, Mager, T, Gushchin, I, Melnikov, I, Borshchevskiy, V, Popov, A, Alekseev, A, Gordeliy, V. | 登録日 | 2017-11-13 | 公開日 | 2017-12-13 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Inward H(+) pump xenorhodopsin: Mechanism and alternative optogenetic approach. Sci Adv, 3, 2017
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3QF6
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![BU of 3qf6 by Molmil](/molmil-images/mine/3qf6) | Neutron structure of type-III Antifreeze Protein allows the reconstruction of AFP-ice interface | 分子名称: | Type-3 ice-structuring protein HPLC 12 | 著者 | Howard, E.I, Blakeley, M.P, Haertlein, M, Petit-Haertlein, I, Mitschler, A, Fisher, S.J, Cousido-Siah, A, Salvay, A.G, Popov, A, Muller-Dieckmann, C, Petrova, T, Podjarny, A. | 登録日 | 2011-01-21 | 公開日 | 2011-06-22 | 最終更新日 | 2024-03-20 | 実験手法 | NEUTRON DIFFRACTION (1.85 Å) | 主引用文献 | Neutron structure of type-III antifreeze protein allows the reconstruction of AFP-ice interface. J.Mol.Recognit., 24, 2011
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5EGO
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![BU of 5ego by Molmil](/molmil-images/mine/5ego) | HOXB13-MEIS1 heterodimer bound to methylated DNA | 分子名称: | DNA (5'-D(*CP*CP*TP*(5CM)P*GP*TP*AP*AP*AP*AP*CP*TP*GP*TP*CP*AP*AP*C)-3'), DNA (5'-D(P*GP*TP*TP*GP*AP*CP*AP*GP*TP*TP*TP*TP*AP*(5CM)P*GP*AP*GP*G)-3'), Homeobox protein Hox-B13, ... | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2015-10-27 | 公開日 | 2016-11-09 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science, 356, 2017
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5EF6
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![BU of 5ef6 by Molmil](/molmil-images/mine/5ef6) | Structure of HOXB13 complex with methylated DNA | 分子名称: | DNA (5'-D(P*GP*GP*AP*CP*CP*TP*(5CM)P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM)P*GP*AP*GP*GP*TP*CP*C)-3'), Homeobox protein Hox-B13 | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2015-10-23 | 公開日 | 2017-02-08 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science, 356, 2017
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5EG0
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![BU of 5eg0 by Molmil](/molmil-images/mine/5eg0) | HOXB13-MEIS1 heterodimer bound to DNA | 分子名称: | DNA (5'-D(*CP*CP*TP*CP*GP*TP*AP*AP*AP*AP*CP*TP*GP*TP*CP*AP*AP*C)-3'), DNA (5'-D(P*GP*TP*TP*GP*AP*CP*AP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*G)-3'), Homeobox protein Hox-B13, ... | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2015-10-26 | 公開日 | 2016-11-09 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (3.101 Å) | 主引用文献 | Molecular basis of recognition of two distinct DNA sequences by a single transcription factor To Be Published
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5EEA
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![BU of 5eea by Molmil](/molmil-images/mine/5eea) | Structure of HOXB13-DNA(CAA) complex | 分子名称: | DNA (5'-D(P*GP*GP*AP*CP*CP*CP*AP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*TP*TP*GP*GP*GP*TP*CP*C)-3'), Homeobox protein Hox-B13 | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2015-10-22 | 公開日 | 2016-10-26 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (2.195 Å) | 主引用文献 | Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife, 7, 2018
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5EDN
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![BU of 5edn by Molmil](/molmil-images/mine/5edn) | Structure of HOXB13-DNA(TCG) complex | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(P*GP*GP*AP*CP*CP*TP*CP*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*AP*C)-3'), DNA (5'-D(P*GP*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3'), ... | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2015-10-21 | 公開日 | 2016-11-09 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife, 7, 2018
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7PSX
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![BU of 7psx by Molmil](/molmil-images/mine/7psx) | Structure of HOXB13 bound to hydroxymethylated DNA | 分子名称: | DNA (5'-D(P*GP*GP*AP*CP*CP*TP*5HCP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*GP*TP*CP*C)-3'), Homeobox protein Hox-B13, ... | 著者 | Morgunova, E, Popov, A, Yin, Y, Taipale, J. | 登録日 | 2021-09-24 | 公開日 | 2022-10-05 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of HOXB13 bound to hydroxymethylated DNA To Be Published
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7Q3O
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![BU of 7q3o by Molmil](/molmil-images/mine/7q3o) | |
7Q4N
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![BU of 7q4n by Molmil](/molmil-images/mine/7q4n) | |
6ES2
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![BU of 6es2 by Molmil](/molmil-images/mine/6es2) | Structure of CDX2-DNA(CAA) | 分子名称: | DNA (5'-D(P*GP*GP*AP*GP*GP*CP*AP*AP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3'), DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*TP*TP*GP*CP*CP*TP*CP*C)-3'), Homeobox protein CDX-2 | 著者 | Morgunova, E, Yin, Y, Jolma, A, Popov, A, Taipale, J. | 登録日 | 2017-10-19 | 公開日 | 2018-03-21 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife, 7, 2018
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2B97
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![BU of 2b97 by Molmil](/molmil-images/mine/2b97) | Ultra-high resolution structure of hydrophobin HFBII | 分子名称: | Hydrophobin II, MANGANESE (II) ION | 著者 | Hakanpaa, J, Linder, M, Popov, A, Schmidt, A, Rouvinen, J. | 登録日 | 2005-10-11 | 公開日 | 2006-03-28 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (0.75 Å) | 主引用文献 | Hydrophobin HFBII in detail: ultrahigh-resolution structure at 0.75 A. Acta Crystallogr.,Sect.D, 62, 2006
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4YZT
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![BU of 4yzt by Molmil](/molmil-images/mine/4yzt) | Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis complexed with cellotetraose | 分子名称: | 1,2-ETHANEDIOL, Cellulose hydrolase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Liberato, M.V, Popov, A, Polikarpov, I. | 登録日 | 2015-03-25 | 公開日 | 2016-09-07 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (1.665 Å) | 主引用文献 | Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism. Sci Rep, 6, 2016
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4YZP
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![BU of 4yzp by Molmil](/molmil-images/mine/4yzp) | |
1USY
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![BU of 1usy by Molmil](/molmil-images/mine/1usy) | ATP phosphoribosyl transferase (HisG:HisZ) complex from Thermotoga maritima | 分子名称: | ATP PHOSPHORIBOSYLTRANSFERASE, ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT, HISTIDINE, ... | 著者 | Vega, M.C, Fernandez, F.J, Murphy, G.E, Zou, P, Popov, A, Wilmanns, M. | 登録日 | 2003-12-01 | 公開日 | 2004-12-15 | 最終更新日 | 2014-09-10 | 実験手法 | X-RAY DIFFRACTION (2.52 Å) | 主引用文献 | Regulation of the Hetero-Octameric ATP Phosphoribosyl Transferase Complex from Thermotoga Maritima by a tRNA Synthetase-Like Subunit. Mol.Microbiol., 55, 2005
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