Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8OYV
DownloadVisualize
BU of 8oyv by Molmil
De novo designed Claudin fold CLF_4
分子名称: De novo designed soluble Claudin
著者Pacesa, M, Correia, B.E.
登録日2023-05-05
公開日2023-10-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYX
DownloadVisualize
BU of 8oyx by Molmil
De novo designed soluble GPCR-like fold GLF_18
分子名称: De novo designed soluble GPCR-like protein, PHOSPHATE ION
著者Pacesa, M, Correia, B.E.
登録日2023-05-05
公開日2023-10-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYW
DownloadVisualize
BU of 8oyw by Molmil
De novo designed rhomboid protease-like fold RPF_9
分子名称: De novo designed soluble Rhomboid protease-like protein, SODIUM ION
著者Pacesa, M, Correia, B.E.
登録日2023-05-05
公開日2023-10-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYY
DownloadVisualize
BU of 8oyy by Molmil
De novo designed soluble GPCR-like fold GLF_32
分子名称: CHLORIDE ION, De novo designed soluble GPCR-like protein, POTASSIUM ION
著者Pacesa, M, Correia, B.E.
登録日2023-05-05
公開日2023-10-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
6CZH
DownloadVisualize
BU of 6czh by Molmil
Structure of a redesigned beta barrel, mFAP0, bound to DFHBI
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, mFAP0
著者Doyle, L.A, Stoddard, B.L.
登録日2018-04-09
公開日2018-09-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献De novo design of a fluorescence-activating beta-barrel.
Nature, 561, 2018
6CZI
DownloadVisualize
BU of 6czi by Molmil
Structure of a redesigned beta barrel, mFAP1, bound to DFHBI
分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, mFAP1
著者Doyle, L.A, Stoddard, B.L.
登録日2018-04-09
公開日2018-09-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献De novo design of a fluorescence-activating beta-barrel.
Nature, 561, 2018
8P49
DownloadVisualize
BU of 8p49 by Molmil
Uncharacterized Q8U0N8 protein from Pyrococcus furiosus
分子名称: Q8U0N8 protein
著者Pacesa, M, Correia, B.E, Levy, E.D.
登録日2023-05-19
公開日2023-11-29
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8Q70
DownloadVisualize
BU of 8q70 by Molmil
tRNA pseudouridine synthase A homodimer
分子名称: CHLORIDE ION, MAGNESIUM ION, tRNA pseudouridine synthase A
著者Pacesa, M, Correia, B.E, Levy, E.D.
登録日2023-08-15
公開日2023-11-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8QHP
DownloadVisualize
BU of 8qhp by Molmil
Cysteine tRNA ligase homodimer
分子名称: Cysteine--tRNA ligase, ZINC ION
著者Pacesa, M, Correia, B.E, Levy, E.D.
登録日2023-09-08
公開日2023-11-29
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
7M0Q
DownloadVisualize
BU of 7m0q by Molmil
Crystal structure of deep network hallucinated protein 0738_mod
分子名称: Network hallucinated protein 0738_mod
著者Pellock, S.J, Bera, A.K, Anishchenko, I, Baker, D.
登録日2021-03-11
公開日2021-12-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献De novo protein design by deep network hallucination.
Nature, 600, 2021
7M5T
DownloadVisualize
BU of 7m5t by Molmil
Solution NMR structure of de novo designed protein 0515
分子名称: De novo designed protein 0515
著者Ramelot, T.A, Hao, J, Baker, D, Montelione, G.T.
登録日2021-03-24
公開日2021-12-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献De novo protein design by deep network hallucination.
Nature, 600, 2021
7UR7
DownloadVisualize
BU of 7ur7 by Molmil
17_bp_sh3, a small beta-barrel de novo designed protein
分子名称: 17_bp_sh3
著者Bera, A.K, Kim, D, Baker, D.
登録日2022-04-21
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UR8
DownloadVisualize
BU of 7ur8 by Molmil
170_h_ob, a small beta-barrel de novo designed protein
分子名称: 170_h_ob
著者Bera, A.K, Kim, D, Baker, D.
登録日2022-04-21
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UWY
DownloadVisualize
BU of 7uwy by Molmil
NMR solution structure of the De novo designed small beta-barrel protein 29_bp_sh3
分子名称: De novo designed small beta-barrel protein 29_bp_sh3
著者Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D.
登録日2022-05-04
公開日2023-03-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UWZ
DownloadVisualize
BU of 7uwz by Molmil
NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3
分子名称: De novo designed small beta-barrel protein 33_bp_sh3
著者Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D.
登録日2022-05-04
公開日2023-03-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献De novo design of small beta barrel proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
6UF2
DownloadVisualize
BU of 6uf2 by Molmil
NMR structure of biofilm-related Se0862 from Synechococcus elongatus
分子名称: Biofilm-related protein
著者Zhang, N, LiWang, A.L.
登録日2019-09-23
公開日2020-09-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation.
Protein Sci., 29, 2020
6VK3
DownloadVisualize
BU of 6vk3 by Molmil
CryoEM structure of Hrd3/Yos9 complex
分子名称: Hrd3, Protein OS-9 homolog
著者Wu, X, Rapoport, T.A.
登録日2020-01-18
公開日2020-04-29
最終更新日2020-05-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.
Science, 368, 2020
6VJZ
DownloadVisualize
BU of 6vjz by Molmil
CryoEM structure of Hrd1-Usa1/Der1/Hrd3 complex of the expected topology
分子名称: Degradation in the endoplasmic reticulum protein 1, ERAD-associated E3 ubiquitin-protein ligase HRD1, ERAD-associated E3 ubiquitin-protein ligase component HRD3, ...
著者Wu, X, Rapoport, T.A.
登録日2020-01-18
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.
Science, 368, 2020
6VK1
DownloadVisualize
BU of 6vk1 by Molmil
CryoEM structure of Hrd1/Hrd3 part from Hrd1-Usa1/Der1/Hrd3 complex
分子名称: ERAD-associated E3 ubiquitin-protein ligase HRD1, ERAD-associated E3 ubiquitin-protein ligase component HRD3
著者Wu, X, Rapoport, T.A.
登録日2020-01-18
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.
Science, 368, 2020
6VK0
DownloadVisualize
BU of 6vk0 by Molmil
CryoEM structure of Hrd1-Usa1/Der1/Hrd3 of the flipped topology
分子名称: Degradation in the endoplasmic reticulum protein 1, ERAD-associated E3 ubiquitin-protein ligase HRD1, ERAD-associated E3 ubiquitin-protein ligase component HRD3, ...
著者Wu, X, Rapoport, T.A.
登録日2020-01-18
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.
Science, 368, 2020
<12

 

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon