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7EXB
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BU of 7exb by Molmil
DfgA-DfgB complex apo 2.4 angstrom
分子名称: DfgB, MANGANESE (II) ION, SULFATE ION, ...
著者Mori, T, Senda, M, Senda, T, Abe, I.
登録日2021-05-26
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
6M35
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BU of 6m35 by Molmil
Crystal structure of sulfur oxygenase reductase from Sulfurisphaera tokodaii
分子名称: FE (III) ION, GLYCEROL, SULFATE ION, ...
著者Sato, Y, Yabuki, T, Arakawa, T, Yamada, C, Fushinobu, S, Wakagi, T.
登録日2020-03-02
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystallographic and cryogenic electron microscopic structures and enzymatic characterization of sulfur oxygenase reductase fromSulfurisphaera tokodaii.
J Struct Biol X, 4, 2020
6LTB
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BU of 6ltb by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-AMPPNP bound form
分子名称: Nonribosomal peptide synthetase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LTA
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BU of 6lta by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)
分子名称: ACRYLIC ACID, Nonribosomal peptide synthetase
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LTC
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BU of 6ltc by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Nonribosomal peptide synthetase, ...
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LTD
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BU of 6ltd by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
分子名称: ADENOSINE MONOPHOSPHATE, Nonribosomal peptide synthetase, alpha-methyl-L-serine
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
7BVR
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BU of 7bvr by Molmil
DgpB-DgpC complex apo
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AP_endonuc_2 domain-containing protein, DgpB, ...
著者Mori, T, He, H, Abe, I.
登録日2020-04-11
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
7BVS
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BU of 7bvs by Molmil
DfgA-DfgB complex apo
分子名称: DfgB, GLYCEROL, MANGANESE (II) ION, ...
著者Mori, T, He, H, Abe, I.
登録日2020-04-11
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
7EFV
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BU of 7efv by Molmil
Crystal structure of octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
著者Minato, T, Teramoto, T, Hung, N.K, Yamada, K, Ogo, S, Kakuta, Y, Yoon, K.S.
登録日2021-03-23
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
7EFW
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BU of 7efw by Molmil
Crystal structure of hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, GLYCEROL, ...
著者Minato, T, Teramoto, T, Hung, N.K, Yamada, K, Ogo, S, Kakuta, Y, Yoon, K.S.
登録日2021-03-23
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
7VTA
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BU of 7vta by Molmil
Talaromyces verruculosus talaropentaene synthase apo
分子名称: TvTS cyclase domain
著者Hui, T, Mori, T, Abe, I.
登録日2021-10-28
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of non-squalene triterpenes.
Nature, 606, 2022
7VTB
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BU of 7vtb by Molmil
Partially closed conformation of talaropentaene synthase cyclase domain
分子名称: NICKEL (II) ION, TvTS cyclase domain
著者Hui, T, Mori, T, Abe, I.
登録日2021-10-28
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of non-squalene triterpenes.
Nature, 606, 2022
7WIJ
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BU of 7wij by Molmil
Cryo-EM structure of prenyltransferase domain of Macrophoma phaseolina macrophomene synthase
分子名称: Geranylgeranyl diphosphate synthase
著者Mori, T, Adachi, N, Abe, I.
登録日2022-01-03
公開日2022-06-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Discovery of non-squalene triterpenes.
Nature, 606, 2022
7VU9
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BU of 7vu9 by Molmil
Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)[GlcNAc(beta1-4)]GlcNAc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lectin (PhoSL)
著者Yamasaki, K, Yamasaki, T, Kubota, T.
登録日2021-11-01
公開日2022-10-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献Core fucose-specific Pholiota squarrosa lectin (PhoSL) as a potent broad-spectrum inhibitor of SARS-CoV-2 infection.
Febs J., 290, 2023
7WJE
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BU of 7wje by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerotetraose
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJF
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BU of 7wjf by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with kojibiose
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-2)-alpha-D-glucopyranose
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJD
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BU of 7wjd by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerotriose
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose, ...
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJ9
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BU of 7wj9 by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P21 space group
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, Xylitol
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJB
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BU of 7wjb by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase in complex with glucose
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose, ...
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJC
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BU of 7wjc by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerose
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7WJA
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BU of 7wja by Molmil
Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P6322 space group
分子名称: 1,2-ETHANEDIOL, Alpha-xylosidase
著者Ikegaya, M, Miyazaki, T.
登録日2022-01-06
公開日2022-03-30
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of the strict specificity of a bacterial GH31 alpha-1,3-glucosidase for nigerooligosaccharides.
J.Biol.Chem., 298, 2022
7B67
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BU of 7b67 by Molmil
Structure of NUDT15 V18_V19insGV Mutant in complex with TH7755
分子名称: (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one, MAGNESIUM ION, Nucleotide triphosphate diphosphatase NUDT15, ...
著者Rehling, D, Stenmark, P.
登録日2020-12-07
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structures of NUDT15 variants enabled by a potent inhibitor reveal the structural basis for thiopurine sensitivity.
J.Biol.Chem., 296, 2021
7B65
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BU of 7b65 by Molmil
Structure of NUDT15 R139C Mutant in complex with TH7755
分子名称: (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one, Nucleotide triphosphate diphosphatase NUDT15
著者Rehling, D, Stenmark, P.
登録日2020-12-07
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of NUDT15 variants enabled by a potent inhibitor reveal the structural basis for thiopurine sensitivity.
J.Biol.Chem., 296, 2021
7B63
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Structure of NUDT15 in complex with TH7755
分子名称: (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one, MAGNESIUM ION, Probable 8-oxo-dGTP diphosphatase NUDT15
著者Rehling, D, Stenmark, P.
登録日2020-12-07
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of NUDT15 variants enabled by a potent inhibitor reveal the structural basis for thiopurine sensitivity.
J.Biol.Chem., 296, 2021
7B64
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BU of 7b64 by Molmil
Structure of NUDT15 V18I Mutant in complex with TH7755
分子名称: (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one, Nucleotide triphosphate diphosphatase NUDT15
著者Rehling, D, Stenmark, P.
登録日2020-12-07
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures of NUDT15 variants enabled by a potent inhibitor reveal the structural basis for thiopurine sensitivity.
J.Biol.Chem., 296, 2021

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件を2024-10-16に公開中

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