3W97
| Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region | 分子名称: | 146-mer DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H. | 登録日 | 2013-04-01 | 公開日 | 2013-08-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Contribution of histone N-terminal tails to the structure and stability of nucleosomes FEBS Open Bio, 3, 2013
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3W96
| Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region | 分子名称: | 146-mer DNA, CHLORIDE ION, Histone H2A type 1-B/E, ... | 著者 | Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H. | 登録日 | 2013-04-01 | 公開日 | 2013-08-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Contribution of histone N-terminal tails to the structure and stability of nucleosomes FEBS Open Bio, 3, 2013
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3W99
| Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region | 分子名称: | 146-mer DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H. | 登録日 | 2013-04-01 | 公開日 | 2013-08-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Contribution of histone N-terminal tails to the structure and stability of nucleosomes FEBS Open Bio, 3, 2013
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3W98
| Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region | 分子名称: | 146-mer DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H. | 登録日 | 2013-04-01 | 公開日 | 2013-08-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.42 Å) | 主引用文献 | Contribution of histone N-terminal tails to the structure and stability of nucleosomes FEBS Open Bio, 3, 2013
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3AV1
| The human nucleosome structure containing the histone variant H3.2 | 分子名称: | 146-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Tachiwana, H, Osakabe, A, Shiga, T, Miya, Y, Kimura, H, Kagawa, W, Kurumizaka, H. | 登録日 | 2011-02-18 | 公開日 | 2011-06-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structures of human nucleosomes containing major histone H3 variants Acta Crystallogr.,Sect.D, 67, 2011
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4XRE
| Crystal structure of Gnk2 complexed with mannose | 分子名称: | Antifungal protein ginkbilobin-2, alpha-D-mannopyranose | 著者 | Miyakawa, T, Hatano, K, Miyauchi, Y, Suwa, Y, Sawano, Y, Tanokura, M. | 登録日 | 2015-01-21 | 公開日 | 2015-02-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.597 Å) | 主引用文献 | A secreted protein with plant-specific cysteine-rich motif functions as a mannose-binding lectin that exhibits antifungal activity. Plant Physiol., 166, 2014
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2KIA
| Solution structure of Myosin VI C-terminal cargo-binding domain | 分子名称: | Myosin-VI | 著者 | Feng, W, Yu, C, Wei, Z, Miyanoiri, Y, Zhang, M. | 登録日 | 2009-04-29 | 公開日 | 2009-09-29 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Myosin VI undergoes cargo-mediated dimerization Cell(Cambridge,Mass.), 138, 2009
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2KYD
| RDC and RCSA refinement of an A-form RNA: Improvements in Major Groove Width | 分子名称: | RNA (5'-R(*CP*UP*AP*GP*UP*UP*AP*GP*CP*UP*AP*AP*CP*UP*AP*G)-3') | 著者 | Tolbert, B.S, Summers, M.F, Miyazaki, Y, Barton, S, Kinde, B, Stark, P, Singh, R, Bax, A, Case, D. | 登録日 | 2010-05-24 | 公開日 | 2010-07-07 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H-13C residual dipolar coupling on refinement. J.Biomol.Nmr, 47, 2010
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4U4P
| Crystal structure of the human condensin SMC hinge domain heterodimer with short coiled coils | 分子名称: | Structural maintenance of chromosomes protein 2, Structural maintenance of chromosomes protein 4 | 著者 | Uchiyama, S, Kawahara, K, Hosokawa, Y, Fukakusa, S, Oki, H, Nakamura, S, Noda, M, Takino, R, Miyahara, Y, Maruno, T, Kobayashi, Y, Ohkubo, T, Fukui, K. | 登録日 | 2014-07-24 | 公開日 | 2015-08-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | Structural basis for dimer information and DNA recognition of human SMC proteins to be published
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5WUT
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5B56
| Crystal structure of HIV-1 VPR C-Terminal domain and DIBB-M-Importin-Alpha2 complex | 分子名称: | Importin subunit alpha-1, Protein Vpr | 著者 | Miyatake, H, Sanjoh, A, Matusda, G, Murakami, T, Murakami, H, Hagiwara, K, Yokoyama, M, Sato, H, Miyamoto, Y, Dohmae, N, Aida, Y. | 登録日 | 2016-04-25 | 公開日 | 2016-06-01 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Molecular Mechanism of HIV-1 Vpr for Binding to Importin-alpha J.Mol.Biol., 428, 2016
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3W9K
| Crystal structure of thermoacidophile-specific protein STK_08120 complexed with myristic acid | 分子名称: | FATTY ACID-BINDING PROTEIN, MYRISTIC ACID | 著者 | Miyakawa, T, Sawano, Y, Miyazono, K, Miyauchi, Y, Hatano, K, Tanokura, M. | 登録日 | 2013-04-05 | 公開日 | 2013-07-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | A thermoacidophile-specific protein family, DUF3211, functions as a fatty acid carrier with novel binding mode. J.Bacteriol., 195, 2013
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1WS8
| Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini) | 分子名称: | COPPER (II) ION, GLYCEROL, mavicyanin | 著者 | Xie, Y, Inoue, T, Miyamoto, Y, Matsumura, H, Kunishige, K, Yamaguchi, K, Nojini, M, Suzuki, S, Kai, Y. | 登録日 | 2004-11-02 | 公開日 | 2004-11-23 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural reorganization of the copper binding site involving Thr15 of mavicyanin from Cucurbita pepo medullosa (zucchini) upon reduction. J.Biochem.(Tokyo), 137, 2005
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3WQU
| Staphylococcus aureus FtsA complexed with ATP | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION | 著者 | Fujita, J, Maeda, Y, Miyazaki, Y, Inoue, T, Matsumura, H. | 登録日 | 2014-02-01 | 公開日 | 2014-10-08 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of FtsA from Staphylococcus aureus FEBS Lett., 588, 2014
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1WS7
| Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini) | 分子名称: | COPPER (I) ION, Mavicyanin | 著者 | Xie, Y, Inoue, T, Miyamoto, Y, Matsumura, H, Kataoka, K, Yamaguchi, K, Nojini, M, Suzuki, S, Kai, Y. | 登録日 | 2004-11-02 | 公開日 | 2004-11-23 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural reorganization of the copper binding site involving Thr15 of mavicyanin from Cucurbita pepo medullosa (zucchini) upon reduction. J.Biochem.(Tokyo), 137, 2005
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1IQT
| Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1) | 分子名称: | heterogeneous nuclear ribonucleoprotein D0 | 著者 | Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S. | 登録日 | 2001-08-01 | 公開日 | 2002-08-07 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA. J.Mol.Biol., 311, 2001
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2LX3
| 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | 分子名称: | Type III antifreeze protein nfeAFP11 | 著者 | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | 登録日 | 2012-08-12 | 公開日 | 2013-07-24 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner J.Biomol.Nmr, 55, 2013
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2LX2
| 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | 分子名称: | Type III antifreeze protein nfeAFP11 | 著者 | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | 登録日 | 2012-08-12 | 公開日 | 2013-07-24 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner J.Biomol.Nmr, 55, 2013
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3WH3
| human Mincle, ligand free form | 分子名称: | C-type lectin domain family 4 member E, CALCIUM ION | 著者 | Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K. | 登録日 | 2013-08-21 | 公開日 | 2013-10-23 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.32 Å) | 主引用文献 | Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL Proc.Natl.Acad.Sci.USA, 110, 2013
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3WP9
| Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. | 分子名称: | Ice-binding protein | 著者 | Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H. | 登録日 | 2014-01-10 | 公開日 | 2014-07-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences. Febs J., 281, 2014
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3WR7
| Crystal Structure of Spermidine Acetyltransferase from Escherichia coli | 分子名称: | COENZYME A, SPERMIDINE, Spermidine N1-acetyltransferase | 著者 | Sugiyama, S, Ishikawa, S, Tomitori, S, Niiyama, M, Hirose, M, Miyazaki, Y, Higashi, K, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Kashiwagi, K, Igarashi, K, Matsumura, H. | 登録日 | 2014-02-20 | 公開日 | 2015-09-02 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase Int.J.Biochem.Cell Biol., 76, 2016
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4RLL
| Crystal structure of human CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate | 分子名称: | 4-[(E)-(9H-fluoren-9-ylidenehydrazinylidene)methyl]benzoic acid, Casein kinase II subunit alpha, GLYCEROL | 著者 | Guerra, B, Rasmussen, T.D.L, Schnitzler, A, Jensen, H.H, Boldyreff, B.S, Miyata, Y, Marcussen, N, Niefind, K, Issinger, O.G. | 登録日 | 2014-10-17 | 公開日 | 2014-12-17 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Protein kinase CK2 inhibition is associated with the destabilization of HIF-1 alpha in human cancer cells. Cancer Lett, 356, 2015
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4RLK
| Crystal structure of Z. mays CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate | 分子名称: | 4-[(E)-(9H-fluoren-9-ylidenehydrazinylidene)methyl]benzoic acid, ACETATE ION, Casein kinase II subunit alpha, ... | 著者 | Guerra, B, Rasmussen, T.D.L, Schnitzler, A, Jensen, H.H, Boldyreff, B.S, Miyata, Y, Marcussen, N, Niefind, K, Issinger, O.G. | 登録日 | 2014-10-17 | 公開日 | 2014-12-17 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (1.24 Å) | 主引用文献 | Protein kinase CK2 inhibition is associated with the destabilization of HIF-1 alpha in human cancer cells. Cancer Lett, 356, 2015
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3WQT
| Staphylococcus aureus FtsA complexed with AMPPNP | 分子名称: | CHLORIDE ION, Cell division protein FtsA, MAGNESIUM ION, ... | 著者 | Fujita, J, Maeda, Y, Miyazaki, Y, Inoue, T, Matsumura, H. | 登録日 | 2014-02-01 | 公開日 | 2014-10-08 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of FtsA from Staphylococcus aureus FEBS Lett., 588, 2014
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5Z1N
| Crystal structure of C terminal region of G-protein interacting protein 1 (Gip1) from Dictyostelium discoideum | 分子名称: | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, G-protein interacting protein 1, ... | 著者 | Miyagawa, T, Koteishi, H, Kamimura, Y, Miyanaga, Y, Takeshita, K, Nakagawa, A, Ueda, M. | 登録日 | 2017-12-27 | 公開日 | 2018-10-17 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.949 Å) | 主引用文献 | Structural basis of Gip1 for cytosolic sequestration of G protein in wide-range chemotaxis Nat Commun, 9, 2018
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