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1XPE
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BU of 1xpe by Molmil
HIV-1 subtype B genomic RNA Dimerization Initiation Site
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', CHLORIDE ION, MAGNESIUM ION, ...
著者Ennifar, E, Dumas, P.
登録日2004-10-08
公開日2005-10-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
1Y6S
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BU of 1y6s by Molmil
HIV-1 DIS(Mal) duplex Ba-soaked
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', BARIUM ION
著者Ennifar, E, Walter, P, Dumas, P.
登録日2004-12-07
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y3S
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BU of 1y3s by Molmil
HIV-1 DIS RNA subtype F- MPD form
分子名称: 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, POTASSIUM ION
著者Ennifar, E, Dumas, P.
登録日2004-11-26
公開日2005-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1Y95
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BU of 1y95 by Molmil
HIV-1 Dis(Mal) Duplex Pb-Soaked
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', LEAD (II) ION, MAGNESIUM ION
著者Ennifar, E, Walter, P, Dumas, P.
登録日2004-12-14
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y6T
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BU of 1y6t by Molmil
HIV-1 Dis(Mal) Duplex Co Hexamine-Soaked
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (III) ION, SODIUM ION
著者Ennifar, E, Walter, P, Dumas, P.
登録日2004-12-07
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y99
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BU of 1y99 by Molmil
HIV-1 subtype A DIS RNA duplex
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION
著者Ennifar, E, Yusupov, M, Walter, P, Marquet, R, Ehresmann, B, Ehresmann, C, Dumas, P.
登録日2004-12-15
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges
Structure Fold.Des., 7, 1999
1Y3O
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BU of 1y3o by Molmil
HIV-1 DIS RNA subtype F- Mn soaked
分子名称: 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MANGANESE (II) ION, SODIUM ION
著者Ennifar, E, Dumas, P.
登録日2004-11-26
公開日2005-11-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1Y73
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BU of 1y73 by Molmil
HIV-1 Dis(Mal) Duplex Pt-Soaked
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, PLATINUM (IV) ION
著者Ennifar, E, Walter, P, Dumas, P.
登録日2004-12-08
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1ZCI
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BU of 1zci by Molmil
HIV-1 DIS RNA subtype F- monoclinic form
分子名称: 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', POTASSIUM ION
著者Ennifar, E, Dumas, P.
登録日2005-04-12
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1YXP
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BU of 1yxp by Molmil
HIV-1 DIS RNA subtype F- Zn soaked
分子名称: 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', ZINC ION
著者Ennifar, E, Dumas, P.
登録日2005-02-22
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
7L3R
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BU of 7l3r by Molmil
23S Sarcin Ricin Loop with a 3-deazapurine A2670
分子名称: GLYCEROL, RNA (27-MER)
著者Ennifar, E, Renard, E.
登録日2020-12-18
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Impact of 3-deazapurine nucleobases on RNA properties.
Nucleic Acids Res., 49, 2021
7QP2
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BU of 7qp2 by Molmil
1-deazaguanosine modified-RNA Sarcin Ricin Loop
分子名称: GLYCEROL, RNA (27-MER)
著者Ennifar, E, Micura, R, Bereiter, R, Renard, E, Kreutz, C.
登録日2021-12-30
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献1-Deazaguanosine-Modified RNA: The Missing Piece for Functional RNA Atomic Mutagenesis.
J.Am.Chem.Soc., 144, 2022
6XUR
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BU of 6xur by Molmil
RNA dodecamer with a 6-hydrazino-2-aminopurine modified base
分子名称: MAGNESIUM ION, RNA dodecamer with a 6-hydrazino-2-aminopurine modified base
著者Ennifar, E, Micura, R, Gasser, C, Brillet, K.
登録日2020-01-21
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Thioguanosine Conversion Enables mRNA-Lifetime Evaluation by RNA Sequencing Using Double Metabolic Labeling (TUC-seq DUAL).
Angew.Chem.Int.Ed.Engl., 59, 2020
6XUS
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BU of 6xus by Molmil
RNA dodecamer with a 6-hydrazino-2-aminopurine modified base
分子名称: MAGNESIUM ION, RNA dodecamer with a 6-hydrazino-2-aminopurine modified base, SODIUM ION
著者Ennifar, E, Micura, R, Gasser, C, Brillet, K.
登録日2020-01-21
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Thioguanosine Conversion Enables mRNA-Lifetime Evaluation by RNA Sequencing Using Double Metabolic Labeling (TUC-seq DUAL).
Angew.Chem.Int.Ed.Engl., 59, 2020
7QSH
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BU of 7qsh by Molmil
23S ribosomal RNA Sarcin Ricin Loop 27-nt fragment containing a Xanthosine residue at position 2648
分子名称: 23S ribosomal RNA Sarcin Ricin Loop 27-nucleotide fragment, 9-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-2-oxidanyl-1~{H}-purin-6-one, GLYCEROL, ...
著者Ennifar, E, Micura, R.
登録日2022-01-13
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA.
Nucleic Acids Res., 50, 2022
7QTN
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BU of 7qtn by Molmil
Duplex RNA containing Xanthosine-Cytosine base pairs
分子名称: RNA (5'-R(*GP*GP*UP*AP*(RY)P*UP*GP*CP*GP*(XAN)P*UP*AP*CP*C)-3'), RNA (5'-R(*GP*GP*UP*AP*CP*UP*GP*CP*GP*(XAM)P*UP*AP*CP*C)-3')
著者Ennifar, E, Micura, R.
登録日2022-01-14
公開日2023-01-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA.
Nucleic Acids Res., 50, 2022
7QUA
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BU of 7qua by Molmil
Duplex RNA containing Xanthosine-Cytosine base pairs
分子名称: MAGNESIUM ION, RNA (5'-R(*CP*GP*CP*GP*(XAN)P*AP*UP*UP*AP*GP*CP*G)-3'), SODIUM ION
著者Ennifar, E, Micura, R.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA.
Nucleic Acids Res., 50, 2022
3ISN
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BU of 3isn by Molmil
Crystal structure of HIV-1 RT bound to A 6-vinylpyrimidine inhibitor
分子名称: 6-ethenyl-N,N-dimethyl-2-(methylsulfonyl)pyrimidin-4-amine, Reverse transcriptase/ribonuclease H, p51 RT
著者Ennifar, E, Freisz, S, Bec, G, Dumas, P, Botta, M, Radi, M.
登録日2009-08-26
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of HIV-1 Reverse Transcriptase Bound to a Non-Nucleoside Inhibitor with a Novel Mechanism of Action
Angew.Chem.Int.Ed.Engl., 49, 2010
4NXH
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BU of 4nxh by Molmil
2'-Trifluoromethylthiouridine-modified E. coli 23S rRNA Sarcin Ricin Loop
分子名称: 23S ribosomal RNA Sarcin Ricin Loop, GLYCEROL, SULFATE ION
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-12-09
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.158 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
6ZYB
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BU of 6zyb by Molmil
Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification
分子名称: Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification
著者Ennifar, E.
登録日2020-07-31
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy.
Chem Sci, 11, 2020
6ZXZ
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BU of 6zxz by Molmil
Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification
分子名称: POTASSIUM ION, SODIUM ION, Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification
著者Ennifar, E.
登録日2020-07-30
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy.
Chem Sci, 11, 2020
4Y27
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BU of 4y27 by Molmil
E.coli 23S Sarcin-Ricil Loop, modified with a 2-Me on G2661 and a methylphosphonate on A2662
分子名称: 27-mer 23S Sarcin-Ricil Loop
著者Ennifar, E, Micura, R, Fluer, S.
登録日2015-02-09
公開日2015-11-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.998 Å)
主引用文献Role of a ribosomal RNA phosphate oxygen during the EF-G-triggered GTP hydrolysis.
Proc.Natl.Acad.Sci.USA, 112, 2015
4NMG
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BU of 4nmg by Molmil
2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL
分子名称: 23S ribosomal RNA Sarcin Ricin Loop
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-11-15
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
4NLF
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BU of 4nlf by Molmil
2'-trifluoromethylthio-2'-deoxycytidine-modified SRL
分子名称: 23S ribosomal RNA Sarcin Ricin Loop, SULFATE ION
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-11-14
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
5MRX
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BU of 5mrx by Molmil
27-nt SRL with a 5-hydroxymethyl cytidine modification
分子名称: RNA (27-MER)
著者Ennifar, E, Micura, R.
登録日2016-12-28
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.851 Å)
主引用文献Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine
J.Org.Chem., 2017

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件を2024-05-29に公開中

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