Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4JM4
DownloadVisualize
BU of 4jm4 by Molmil
Crystal Structure of PGT 135 Fab
分子名称: PGT 135 Heavy Chain, PGT 135 Light Chain
著者Kong, L, Wilson, I.A.
登録日2013-03-13
公開日2013-05-29
最終更新日2013-07-17
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Supersite of immune vulnerability on the glycosylated face of HIV-1 envelope glycoprotein gp120.
Nat.Struct.Mol.Biol., 20, 2013
2PV7
DownloadVisualize
BU of 2pv7 by Molmil
Crystal structure of chorismate mutase / prephenate dehydrogenase (tyrA) (1574749) from Haemophilus influenzae RD at 2.00 A resolution
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, T-protein [Includes: Chorismate mutase (EC 5.4.99.5) (CM) and Prephenate dehydrogenase (EC 1.3.1.12) (PDH)], TYROSINE
著者Joint Center for Structural Genomics (JCSG)
登録日2007-05-09
公開日2007-05-22
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes.
Acta Crystallogr.,Sect.F, 66, 2010
2Q3L
DownloadVisualize
BU of 2q3l by Molmil
CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM DUF3478 FAMILY WITH A SPOIIAA-LIKE FOLD (SHEW_3102) FROM SHEWANELLA LOIHICA PV-4 AT 2.25 A RESOLUTION
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, SODIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2007-05-30
公開日2007-06-12
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding.
Acta Crystallogr.,Sect.F, 66, 2010
2OOK
DownloadVisualize
BU of 2ook by Molmil
Crystal structure of a protein with unknown function (YP_749275.1) from Shewanella Frigidimarina NCIMB 400 at 1.80 A resolution
分子名称: 1,2-ETHANEDIOL, Hypothetical protein
著者Joint Center for Structural Genomics (JCSG)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding.
Acta Crystallogr.,Sect.F, 66, 2010
2OOC
DownloadVisualize
BU of 2ooc by Molmil
Crystal structure of Histidine Phosphotransferase ShpA (NP_419930.1) from Caulobacter crescentus at 1.52 A resolution
分子名称: GLYCEROL, Histidine phosphotransferase, TETRAETHYLENE GLYCOL
著者Joint Center for Structural Genomics (JCSG)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystal structure of histidine phosphotransfer protein ShpA, an essential regulator of stalk biogenesis in Caulobacter crescentus.
J.Mol.Biol., 390, 2009
2Q8U
DownloadVisualize
BU of 2q8u by Molmil
CRYSTAL STRUCTURE OF MRE11 FROM THERMOTOGA MARITIMA MSB8 (TM1635) AT 2.20 A RESOLUTION
分子名称: Exonuclease, putative
著者Joint Center for Structural Genomics (JCSG)
登録日2007-06-11
公開日2007-06-26
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair.
J.Mol.Biol., 397, 2010
3L5O
DownloadVisualize
BU of 3l5o by Molmil
Crystal structure of protein with unknown function from DUF364 family (ZP_00559375.1) from Desulfitobacterium hafniense DCB-2 at 2.01 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
著者Joint Center for Structural Genomics, Joint Center for Structural Genomics (JCSG)
登録日2009-12-22
公開日2010-02-02
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation.
Acta Crystallogr.,Sect.F, 66, 2010
3H50
DownloadVisualize
BU of 3h50 by Molmil
CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION
分子名称: ACETATE ION, Tetracenomycin polyketide synthesis protein, ZINC ION
著者Joint Center for Structural Genomics (JCSG)
登録日2009-04-21
公開日2009-05-05
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.
Acta Crystallogr.,Sect.F, 66, 2010
3HBZ
DownloadVisualize
BU of 3hbz by Molmil
Crystal structure of a putative glycoside hydrolase (bt_2081) from bacteroides thetaiotaomicron vpi-5482 at 2.05 A resolution
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-05-05
公開日2009-05-26
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 A resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
3O0F
DownloadVisualize
BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-07-19
公開日2010-08-25
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
3M82
DownloadVisualize
BU of 3m82 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.40 A resolution (PMSF inhibitor complex structure)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-03-17
公開日2010-05-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3IRB
DownloadVisualize
BU of 3irb by Molmil
Crystal structure of protein with unknown function from DUF35 family (13815350) from SULFOLOBUS SOLFATARICUS at 1.80 A resolution
分子名称: ACETIC ACID, SULFATE ION, ZINC ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-08-21
公開日2009-09-01
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role.
Acta Crystallogr.,Sect.F, 66, 2010
3M81
DownloadVisualize
BU of 3m81 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.50 A resolution (native apo structure)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-03-17
公開日2010-04-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3M83
DownloadVisualize
BU of 3m83 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.12 A resolution (paraoxon inhibitor complex structure)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-03-17
公開日2010-05-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3NL9
DownloadVisualize
BU of 3nl9 by Molmil
Crystal structure of a putative NTP pyrophosphohydrolase (Exig_1061) from EXIGUOBACTERIUM SP. 255-15 at 1.78 A resolution
分子名称: 1,2-ETHANEDIOL, putative NTP pyrophosphohydrolase
著者Joint Center for Structural Genomics (JCSG)
登録日2010-06-21
公開日2010-07-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.
Acta Crystallogr.,Sect.F, 66, 2010
3HSA
DownloadVisualize
BU of 3hsa by Molmil
Crystal structure of pleckstrin homology domain (YP_926556.1) from SHEWANELLA AMAZONENSIS SB2B at 1.99 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, pleckstrin homology domain
著者Joint Center for Structural Genomics (JCSG)
登録日2009-06-10
公開日2009-06-23
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3K5J
DownloadVisualize
BU of 3k5j by Molmil
Crystal structure of Putative SUFU (suppressor of fused protein) homolog (YP_208451.1) from Neisseria gonorrhoeae FA 1090 at 1.40 A resolution
分子名称: GLYCEROL, SULFATE ION, Suppressor of fused family protein
著者Joint Center for Structural Genomics (JCSG)
登録日2009-10-07
公開日2010-01-26
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu.
Protein Sci., 19, 2010
3H0N
DownloadVisualize
BU of 3h0n by Molmil
Crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 A resolution
分子名称: ACETATE ION, GLYCEROL, NICKEL (II) ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-04-09
公開日2009-04-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45  resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator.
Acta Crystallogr.,Sect.F, 66, 2010
3KK7
DownloadVisualize
BU of 3kk7 by Molmil
Crystal structure of Putative cell invasion protein with MAC/Perforin domain (NP_812351.1) from BACTERIODES THETAIOTAOMICRON VPI-5482 at 2.46 A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-11-04
公開日2009-11-24
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron.
Acta Crystallogr.,Sect.F, 66, 2010
5SY8
DownloadVisualize
BU of 5sy8 by Molmil
Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold
分子名称: 10E8 EPITOPE SCAFFOLD T117v2, 10E8 FAB HEAVY CHAIN, 10E8 FAB LIGHT CHAIN, ...
著者Irimia, A, Wilson, I.A.
登録日2016-08-10
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
5T5B
DownloadVisualize
BU of 5t5b by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF 10E8 FAB LIGHT CHAIN MUTANT5 AND T117V2 HIV-1 MPER SCAFFOLD
分子名称: 10E8 EPITOPE SCAFFOLD T117V2, Antibody 10E8 FAB HEAVY CHAIN, Antibody 10E8 FAB LIGHT CHAIN MUTATED, ...
著者Irimia, A, Wilson, I.A.
登録日2016-08-30
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
5T6L
DownloadVisualize
BU of 5t6l by Molmil
Crystal structure of 10E8 Fab in complex with the MPER epitope scaffold T117v2
分子名称: 10E8 EPITOPE SCAFFOLD T117V2, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Antibody 10E8 FAB HEAVY CHAIN, ...
著者Irimia, A, Wilson, I.A.
登録日2016-09-01
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
5TFW
DownloadVisualize
BU of 5tfw by Molmil
Crystal structure of 10E8 Fab light chain mutant2 against the MPER region of the HIV-1 Env, in complex with T117v2 epitope scaffold
分子名称: 1,2-ETHANEDIOL, 10E8 EPITOPE SCAFFOLD T117V2, Antibody 10E8 FAB HEAVY CHAIN, ...
著者Irimia, A, Wilson, I.A.
登録日2016-09-26
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.168 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
5T29
DownloadVisualize
BU of 5t29 by Molmil
Crystal structure of 10E8 Fab light chain mutant3, against the MPER region of the HIV-1 Env, in complex with the MPER epitope scaffold T117v2
分子名称: 10E8 EPITOPE SCAFFOLD T117V2, Antibody 10E8 FAB HEAVY CHAIN, Antibody 10E8 FAB LIGHT CHAIN, ...
著者Irimia, A, Wilson, I.A.
登録日2016-08-23
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
5T80
DownloadVisualize
BU of 5t80 by Molmil
Crystal structure of 10E8 Fab in complex with the MPER epitope scaffold T117v2 and phosphatidic acid (06:0 PA)
分子名称: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 10E8 EPITOPE SCAFFOLD T117V2, Antibody 10E8 FAB HEAVY CHAIN, ...
著者Irimia, A, Wilson, I.A.
登録日2016-09-06
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon