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4N1U
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BU of 4n1u by Molmil
Structure of human MTH1 in complex with TH588
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine, SULFATE ION
著者Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
登録日2013-10-04
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
4KA7
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BU of 4ka7 by Molmil
Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate
分子名称: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
著者Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
登録日2013-04-22
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
8QZG
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BU of 8qzg by Molmil
1,3 L,D-transpeptidase from Gluconobacter oxydans
分子名称: CHLORIDE ION, SODIUM ION, YkuD domain-containing protein
著者ter Beek, J, Berntsson, R.P.
登録日2023-10-27
公開日2023-11-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献A distinctive family of L,D-transpeptidases catalyzing L-Ala-mDAP crosslinks in Alpha- and Betaproteobacteria.
Nat Commun, 15, 2024
7AED
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BU of 7aed by Molmil
VirB8 domain of PrgL from Enterococcus faecalis pCF10
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PrgL
著者Jaeger, F, Berntsson, R.P.A.
登録日2020-09-17
公開日2020-11-18
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.753 Å)
主引用文献Structure of the enterococcal T4SS protein PrgL reveals unique dimerization interface in the VirB8 protein family.
Structure, 30, 2022
8S4T
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BU of 8s4t by Molmil
DNA bound structure of PrgE from plasmid pCF10
分子名称: DNA, PrgE, TRIETHYLENE GLYCOL
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2024-02-22
公開日2024-05-29
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs.
Life Sci Alliance, 7, 2024
8S4S
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BU of 8s4s by Molmil
PrgE from plasmid pCF10
分子名称: POTASSIUM ION, PrgE, SULFATE ION
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2024-02-22
公開日2024-05-29
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献PrgE: an OB-fold protein from plasmid pCF10 with striking differences to prototypical bacterial SSBs.
Life Sci Alliance, 7, 2024
6QEQ
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BU of 6qeq by Molmil
PcfF from Enterococcus faecalis pCF10
分子名称: PcfF
著者Rehman, S, Berntsson, R.P.A.
登録日2019-01-08
公開日2019-05-01
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Enterococcal PcfF Is a Ribbon-Helix-Helix Protein That Recruits the Relaxase PcfG Through Binding and Bending of the oriT Sequence.
Front Microbiol, 10, 2019
8BSA
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BU of 8bsa by Molmil
Vc1313-LBD bound to D-arginine
分子名称: D-ARGININE, Methyl-accepting chemotaxis protein
著者ter Beek, J, Berntsson, R.P.-A.
登録日2022-11-24
公開日2023-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献D-amino acids signal a stress-dependent run-away response in Vibrio cholerae.
Nat Microbiol, 8, 2023
8BSB
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BU of 8bsb by Molmil
Vc1313-LBD bound to D-lysine
分子名称: D-LYSINE, Methyl-accepting chemotaxis protein
著者ter Beek, J, Berntsson, R.P.-A.
登録日2022-11-24
公開日2023-06-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献D-amino acids signal a stress-dependent run-away response in Vibrio cholerae.
Nat Microbiol, 8, 2023
8A1B
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BU of 8a1b by Molmil
TraI trans-esterase domain from pKM101 (apo)
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
8A1C
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BU of 8a1c by Molmil
TraI trans-esterase domain from pKM101 (DNA bound)
分子名称: 11mer oriT DNA, MANGANESE (II) ION, TraI
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
8BEG
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BU of 8beg by Molmil
Structure of Ig-like domains from PrgB
分子名称: MAGNESIUM ION, PrgB
著者Jarva, M, Schmitt, A, Berntsson, R.P.-A.
登録日2022-10-21
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural foundation for the role of enterococcal PrgB in conjugation, biofilm formation, and virulence.
Elife, 12, 2023
6EKV
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BU of 6ekv by Molmil
Structure of OrfX2 from Clostridium botulinum A2
分子名称: SULFATE ION, Toxin complex component ORF-X2
著者Gustafsson, R, Berntsson, R.P, Stenmark, P.
登録日2017-09-27
公開日2017-10-25
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of OrfX2 and P47 from a Botulinum neurotoxin OrfX-type gene cluster.
FEBS Lett., 591, 2017
6EVU
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BU of 6evu by Molmil
Adhesin domain of PrgB from Enterococcus faecalis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, PrgB
著者Schmitt, A, Berntsson, R.P.A.
登録日2017-11-02
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction.
Mol. Microbiol., 109, 2018
6GED
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BU of 6ged by Molmil
Adhesin domain of PrgB from Enterococcus faecalis bound to DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*GP*GP*GP*CP*CP*GP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*CP*GP*GP*CP*CP*CP*G)-3'), ...
著者Schmitt, A, Berntsson, R.P.A.
登録日2018-04-26
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献PrgB promotes aggregation, biofilm formation, and conjugation through DNA binding and compaction.
Mol. Microbiol., 109, 2018
5LUZ
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BU of 5luz by Molmil
Structure of Human Neurolysin (E475Q) in complex with neurotensin peptide products
分子名称: CHLORIDE ION, GLYCEROL, Neurolysin, ...
著者Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P.
登録日2016-09-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of Peptide Binding and Cleavage by the Human Mitochondrial Peptidase Neurolysin.
J. Mol. Biol., 430, 2018
3RLB
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BU of 3rlb by Molmil
Crystal structure at 2.0 A of the S-component for thiamin from an ECF-type ABC transporter
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ThiT, nonyl beta-D-glucopyranoside
著者Erkens, G.B, Berntsson, R.P.-A, Fulyani, F, Majsnerowska, M, Vujicic-Zagar, A, ter Beek, J, Poolman, B, Slotboom, D.J.
登録日2011-04-19
公開日2011-06-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structural basis of modularity in ECF-type ABC transporters.
Nat.Struct.Mol.Biol., 18, 2011
3TCF
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BU of 3tcf by Molmil
Crystal structure of E. coli OppA complexed with endogenous ligands
分子名称: Endogenous peptide, Periplasmic oligopeptide-binding protein
著者Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
登録日2011-08-09
公開日2011-10-12
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
3TCG
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BU of 3tcg by Molmil
Crystal structure of E. coli OppA complexed with the tripeptide KGE
分子名称: KGE Peptide, Periplasmic oligopeptide-binding protein
著者Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
登録日2011-08-09
公開日2011-10-12
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
3TCH
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BU of 3tch by Molmil
Crystal structure of E. coli OppA in an open conformation
分子名称: Periplasmic oligopeptide-binding protein
著者Klepsch, M.M, Kovermann, M, Low, C, Balbach, J, de Gier, J.W, Slotboom, D.J, Berntsson, R.P.-A.
登録日2011-08-09
公開日2011-10-12
最終更新日2012-01-11
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Escherichia coli peptide binding protein OppA has a preference for positively charged peptides.
J.Mol.Biol., 414, 2011
8S0U
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BU of 8s0u by Molmil
Structure of the LytM domain of PrgK from E. faecalis
分子名称: PrgK
著者Sun, W.-S, Berntsson, R.P.-A.
登録日2024-02-14
公開日2024-02-28
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Breaking barriers: pCF10 type 4 secretion system relies on a self-regulating muramidase to modulate the cell wall.
Mbio, 2024
5LV0
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BU of 5lv0 by Molmil
Structure of Human Neurolysin (E475Q) in complex with amyloid-beta 35-40 peptide product
分子名称: CHLORIDE ION, GLY-VAL-VAL amyloid 35-40 fragment, Neurolysin, ...
著者Masuyer, G, Berntsson, R.P.-A, Teixeira, P.F, Kmiec, B, Glaser, E, Stenmark, P.
登録日2016-09-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional analysis of Neurolysin, a new component of the mitochondrial peptidolytic network
To Be Published
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