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4TQ5
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BU of 4tq5 by Molmil
Structure of a UbiA homolog from Archaeoglobus fulgidus
分子名称: octyl beta-D-glucopyranoside, prenyltransferase
著者Huang, H, Levin, E.J, Bai, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
登録日2014-06-10
公開日2014-07-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2023 Å)
主引用文献Structure of a Membrane-Embedded Prenyltransferase Homologous to UBIAD1.
Plos Biol., 12, 2014
8SYP
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BU of 8syp by Molmil
Genomic CX3CR1 nucleosome
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-25
公開日2023-11-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 31, 2024
8SPS
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BU of 8sps by Molmil
High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b
分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-03
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
8SPU
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BU of 8spu by Molmil
Structure of ESRRB nucleosome bound OCT4 at site c
分子名称: DNA (168-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2023-05-03
公開日2023-06-28
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7U0J
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BU of 7u0j by Molmil
Structure of 162bp LIN28b nucleosome
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2022-02-18
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7U0I
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BU of 7u0i by Molmil
Structure of LIN28b nucleosome bound 2 OCT4
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Tengfei, L, Guan, R, Bai, Y.
登録日2022-02-18
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7U0G
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BU of 7u0g by Molmil
structure of LIN28b nucleosome bound 3 OCT4
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2022-02-18
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
1YYX
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BU of 1yyx by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) at 2.8M urea
分子名称: Redesigned apo-cytochrome b562
著者Feng, H, Vu, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-25
公開日2005-08-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Detection and structure determination of an equilibrium unfolding intermediates of Rd-apocytochrome b562: native fold with non-native hydrophobic interactions
J.Mol.Biol., 343, 2004
1YZA
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BU of 1yza by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N-terminal helix unfolded
分子名称: Redesigned apo-cytochrome b562
著者Feng, H, Takei, T, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-28
公開日2005-08-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Specific non-native hydrophobic interactions in a hidden folding intermediate: implication for protein folding
Biochemistry, 42, 2003
1YYJ
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BU of 1yyj by Molmil
The NMR solution structure of a redesigned apocytochrome b562:Rd-apocyt b562
分子名称: redesigned apocytochrome B562
著者Feng, H, Takei, J, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-25
公開日2005-08-25
最終更新日2023-09-27
実験手法SOLUTION NMR
主引用文献Specific non-native hydrophobic interactions in a hidden folding intermediate: implications for protein folding
Biochemistry, 42, 2003
1YZC
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BU of 1yzc by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
分子名称: edesigned apo-cytochrome b562
著者Feng, H, Zhou, Z, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-28
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A protein folding pathway with multiple folding intermediates at atomic resolution
Proc.Natl.Acad.Sci.Usa, 102, 2005
2L5A
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BU of 2l5a by Molmil
Structural basis for recognition of centromere specific histone H3 variant by nonhistone Scm3
分子名称: Histone H3-like centromeric protein CSE4, Protein SCM3, Histone H4
著者Zhou, Z, Feng, H, Zhou, B, Ghirlando, R, Hu, K, Zwolak, A, Jenkins, L, Xiao, H, Tjandra, N, Wu, C, Bai, Y.
登録日2010-10-28
公開日2011-03-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for recognition of centromere histone variant CenH3 by the chaperone Scm3.
Nature, 472, 2011
5BX1
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BU of 5bx1 by Molmil
Crystal Structure of PRL-1 complex with compound analogy 3
分子名称: 3-(5,6-dimethyl-2H-isoindol-2-yl)-N'-[(E)-furan-2-ylmethylidene]benzohydrazide, Protein tyrosine phosphatase type IVA 1, SULFATE ION
著者Liu, S, Bai, Y, Zhang, Z.
登録日2015-06-08
公開日2016-12-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of PRL-1 complex with compound analogy 3
To Be Published
2MZD
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BU of 2mzd by Molmil
Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex
分子名称: Cellular tumor antigen p53, Histone acetyltransferase p300
著者Miller Jenkins, L.M, Feng, H, Durell, S.R, Tagad, H.D, Mazur, S.J, Tropea, J.E, Bai, Y, Appella, E.
登録日2015-02-11
公開日2015-03-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex.
Biochemistry, 54, 2015
2LY8
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BU of 2ly8 by Molmil
The budding yeast chaperone Scm3 recognizes the partially unfolded dimer of the centromere-specific Cse4/H4 histone variant
分子名称: Budding yeast chaperone Scm3
著者Hong, J, Feng, H, Zhou, Z, Ghirlando, R, Bai, Y.
登録日2012-09-13
公開日2012-12-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Identification of Functionally Conserved Regions in the Structure of the Chaperone/CenH3/H4 Complex.
J.Mol.Biol., 425, 2013
3HNS
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BU of 3hns by Molmil
CS-35 Fab Complex with Oligoarabinofuranosyl Hexasaccharide
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-3)-[beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-5)]alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
3HNV
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BU of 3hnv by Molmil
CS-35 Fab Complex with Oligoarabinofuranosyl Tetrasaccharide (branch part of Hexasaccharide)
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-3)-alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
3HYH
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BU of 3hyh by Molmil
Crystal structure of the protein kinase domain of yeast AMP-activated protein kinase Snf1
分子名称: Carbon catabolite-derepressing protein kinase
著者Rudolph, M.J, Amodeo, G.A, Bai, Y, Tong, L.
登録日2009-06-22
公開日2009-06-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the protein kinase domain of yeast AMP-activated protein kinase Snf1
Biochem.Biophys.Res.Commun., 337, 2005
3HNT
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BU of 3hnt by Molmil
CS-35 Fab complex with a linear, terminal oligoarabinofuranosyl tetrasaccharide from lipoarabinomannan
分子名称: CS-35 Fab Heavy Chain, CS-35 Fab Light Chain, beta-D-arabinofuranose-(1-2)-alpha-D-arabinofuranose-(1-5)-alpha-D-arabinofuranose-(1-5)-methyl alpha-D-arabinofuranoside
著者Murase, T, Zheng, R.B, Joe, M, Bai, Y, Marcus, S.L, Lowary, T.L, Ng, K.K.S.
登録日2009-06-01
公開日2009-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into antibody recognition of mycobacterial polysaccharides.
J.Mol.Biol., 392, 2009
8EVJ
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BU of 8evj by Molmil
CX3CR1 nucleosome bound PU.1 and C/EBPa
分子名称: DNA (167-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Guan, R, Bai, Y, Lian, T.
登録日2022-10-20
公開日2023-11-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 31, 2024
8EVH
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BU of 8evh by Molmil
CX3CR1 nucleosome and wild type PU.1 complex
分子名称: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2022-10-20
公開日2023-11-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 31, 2024
8EVI
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BU of 8evi by Molmil
CX3CR1 nucleosome and PU.1 complex containing disulfide bond mutations
分子名称: DNA (167-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
著者Lian, T, Guan, R, Bai, Y.
登録日2022-10-20
公開日2023-11-01
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Structural mechanism of synergistic targeting of the CX3CR1 nucleosome by PU.1 and C/EBP alpha.
Nat.Struct.Mol.Biol., 31, 2024
6BUZ
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BU of 6buz by Molmil
Cryo-EM structure of CENP-A nucleosome in complex with kinetochore protein CENP-N
分子名称: DNA (147-MER), Histone H2A, Histone H2B, ...
著者Chittori, S, Hong, J, Kelly, A.E, Bai, Y, Subramaniam, S.
登録日2017-12-11
公開日2017-12-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.92 Å)
主引用文献Structural mechanisms of centromeric nucleosome recognition by the kinetochore protein CENP-N.
Science, 359, 2018
7K59
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BU of 7k59 by Molmil
Structure of apo VCP hexamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021
7K57
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BU of 7k57 by Molmil
Structure of apo VCP dodecamer generated from bacterially recombinant VCP/p97
分子名称: Transitional endoplasmic reticulum ATPase
著者Yu, G, Bai, Y, Li, K, Jiang, W, Zhang, Z.Y.
登録日2020-09-16
公開日2021-10-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-electron microscopy structures of VCP/p97 reveal a new mechanism of oligomerization regulation.
Iscience, 24, 2021

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