1VB9
 
 | | Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product | | 分子名称: | CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-[alpha-D-glucopyranose-(1-6)]alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-amylase II | | 著者 | Mizuno, M, Tonozuka, T, Uechi, A, Ohtaki, A, Ichikawa, K, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2004-02-25 | | 公開日 | 2005-03-08 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | The crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product
EUR.J.BIOCHEM., 271, 2004
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1X0C
 | | Improved Crystal Structure of Isopullulanase from Aspergillus niger ATCC 9642 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase | | 著者 | Mizuno, M, Tonozuka, T, Yamamura, A, Miyasaka, Y, Akeboshi, H, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-17 | | 公開日 | 2006-06-13 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
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1WZK
 | | Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt D465N | | 分子名称: | Alpha-amylase II, CALCIUM ION | | 著者 | Mizuno, M, Ichikawa, K, Tonozuka, T, Ohtaki, A, Shimura, Y, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-06 | | 公開日 | 2005-03-22 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Mutagenesis and Structural Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase II (TVA II)
To be Published
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1WZL
 | | Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469L | | 分子名称: | Alpha-amylase II, CALCIUM ION | | 著者 | Mizuno, M, Ichikawa, K, Tonozuka, T, Ohtaki, A, Shimura, Y, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-06 | | 公開日 | 2005-03-22 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Mutagenesis and Structural Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase II (TVA II)
To be Published
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1WMR
 | | Crystal Structure of Isopullulanase from Aspergillus niger ATCC 9642 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase | | 著者 | Mizuno, M, Tonozuka, T, Miyasaka, Y, Akeboshi, H, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2004-07-15 | | 公開日 | 2005-07-19 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
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1WZM
 | | Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469K | | 分子名称: | Alpha-amylase II, CALCIUM ION | | 著者 | Mizuno, M, Ichikawa, K, Tonozuka, T, Ohtaki, A, Shimura, Y, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2005-03-06 | | 公開日 | 2005-03-22 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Mutagenesis and Structural Analysis of Thermoactinomyces vulgaris R-47 alpha-Amylase II (TVA II)
To be Published
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1UG9
 | | Crystal Structure of Glucodextranase from Arthrobacter globiformis I42 | | 分子名称: | CALCIUM ION, GLYCEROL, glucodextranase | | 著者 | Mizuno, M, Tonozuka, T, Suzuki, S, Uotsu-Tomita, R, Ohtaki, A, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2003-06-16 | | 公開日 | 2003-12-09 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structural insights into substrate specificity and function of glucodextranase
J.Biol.Chem., 279, 2004
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3VSS
 | | Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose | | 分子名称: | Beta-fructofuranosidase, beta-D-fructofuranose | | 著者 | Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K. | | 登録日 | 2012-05-08 | | 公開日 | 2012-08-22 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.97 Å) | | 主引用文献 | Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase
Enzyme.Microb.Technol., 51, 2012
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3VSR
 | | Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain | | 分子名称: | Beta-fructofuranosidase | | 著者 | Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K. | | 登録日 | 2012-05-08 | | 公開日 | 2012-08-22 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase
Enzyme.Microb.Technol., 51, 2012
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3W7T
 | | Escherichia coli K12 YgjK complexed with mannose | | 分子名称: | CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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3W7S
 | | Escherichia coli K12 YgjK complexed with glucose | | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-glucopyranose | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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3W7U
 | | Escherichia coli K12 YgjK complexed with galactose | | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-galactopyranose | | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-06 | | 公開日 | 2013-04-03 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
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1ULV
 | | Crystal Structure of Glucodextranase Complexed with Acarbose | | 分子名称: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION, glucodextranase | | 著者 | Mizuno, M, Tonozuka, T, Suzuki, S, Uotsu-Tomita, R, Kamitori, S, Nishikawa, A, Sakano, Y. | | 登録日 | 2003-09-16 | | 公開日 | 2003-12-09 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.42 Å) | | 主引用文献 | Structural insights into substrate specificity and function of glucodextranase
J.Biol.Chem., 279, 2004
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3VOH
 | | CcCel6A catalytic domain complexed with cellobiose | | 分子名称: | Cellobiohydrolase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | 著者 | Tamura, M, Miyazaki, T, Tanaka, Y, Yoshida, M, Nishikawa, A, Tonozuka, T. | | 登録日 | 2012-01-24 | | 公開日 | 2012-03-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Comparison of the structural changes in two cellobiohydrolases, CcCel6A and CcCel6C, from Coprinopsis cinerea - a tweezer-like motion in the structure of CcCel6C
Febs J., 279, 2012
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3VOJ
 | | CcCel6A catalytic domain mutant D164A | | 分子名称: | Cellobiohydrolase | | 著者 | Tamura, M, Miyazaki, T, Tanaka, Y, Yoshida, M, Nishikawa, A, Tonozuka, T. | | 登録日 | 2012-01-24 | | 公開日 | 2012-03-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | | 主引用文献 | Comparison of the structural changes in two cellobiohydrolases, CcCel6A and CcCel6C, from Coprinopsis cinerea - a tweezer-like motion in the structure of CcCel6C
Febs J., 279, 2012
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3VOG
 | | Catalytic domain of the cellobiohydrolase, CcCel6A, from Coprinopsis cinerea | | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cellobiohydrolase | | 著者 | Tamura, M, Miyazaki, T, Tanaka, Y, Yoshida, M, Nishikawa, A, Tonozuka, T. | | 登録日 | 2012-01-24 | | 公開日 | 2012-03-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | | 主引用文献 | Comparison of the structural changes in two cellobiohydrolases, CcCel6A and CcCel6C, from Coprinopsis cinerea - a tweezer-like motion in the structure of CcCel6C
Febs J., 279, 2012
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3VOI
 | | CcCel6A catalytic domain complexed with p-nitrophenyl beta-D-cellotrioside | | 分子名称: | 4-nitrophenyl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside, Cellobiohydrolase, MAGNESIUM ION | | 著者 | Tamura, M, Miyazaki, T, Tanaka, Y, Yoshida, M, Nishikawa, A, Tonozuka, T. | | 登録日 | 2012-01-24 | | 公開日 | 2012-03-21 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Comparison of the structural changes in two cellobiohydrolases, CcCel6A and CcCel6C, from Coprinopsis cinerea - a tweezer-like motion in the structure of CcCel6C
Febs J., 279, 2012
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3WPU
 | | Full-length beta-fructofuranosidase from Microbacterium saccharophilum K-1 | | 分子名称: | Beta-fructofuranosidase, GLYCEROL | | 著者 | Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T. | | 登録日 | 2014-01-17 | | 公開日 | 2014-03-12 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase
Appl.Microbiol.Biotechnol., 98, 2014
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3W9A
 | | Crystal structure of the catalytic domain of the glycoside hydrolase family 131 protein from Coprinopsis cinerea | | 分子名称: | GLYCEROL, Putative uncharacterized protein | | 著者 | Miyazaki, T, Tanaka, Y, Tamura, M, Yoshida, M, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-04-01 | | 公開日 | 2013-05-22 | | 最終更新日 | 2013-07-10 | | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | | 主引用文献 | Crystal structure of the N-terminal domain of a glycoside hydrolase family 131 protein from Coprinopsis cinerea
Febs Lett., 587, 2013
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3WPV
 | | Microbacterium saccharophilum K-1 beta-fructofuranosidase mutant T47S/F447V/F470Y/P500S | | 分子名称: | Beta-fructofuranosidase, GLYCEROL | | 著者 | Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T. | | 登録日 | 2014-01-17 | | 公開日 | 2014-03-12 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | | 主引用文献 | Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase
Appl.Microbiol.Biotechnol., 98, 2014
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3WZ1
 | | Catalytic domain of beta-agarase from Microbulbifer thermotolerans JAMB-A94 | | 分子名称: | Agarase, GLYCEROL, SODIUM ION | | 著者 | Takagi, E, Hatada, Y, Akita, M, Ohta, Y, Yokoi, G, Miyazaki, T, Nishikawa, A, Tonozuka, T. | | 登録日 | 2014-09-12 | | 公開日 | 2014-11-19 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structure of the catalytic domain of a GH16 beta-agarase from a deep-sea bacterium, Microbulbifer thermotolerans JAMB-A94
Biosci.Biotechnol.Biochem., 79, 2015
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3W7W
 | | Crystal structure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose | | 分子名称: | CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... | | 著者 | Miyazaki, T, Ichikawa, M, Yokoi, G, Kitaoka, M, Mori, H, Kitano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-08 | | 公開日 | 2013-07-17 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structure of a bacterial glycoside hydrolase family 63 enzyme in complex with its glycosynthase product, and insights into the substrate specificity.
Febs J., 280, 2013
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3WWG
 | | Crystal structure of the N-glycan-deficient variant N448A of isopullulanase complexed with isopanose | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | | 著者 | Miyazaki, T, Yashiro, H, Nishikawa, A, Tonozuka, T. | | 登録日 | 2014-06-17 | | 公開日 | 2014-11-12 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase
J.Biochem., 157, 2015
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3W7X
 | | Crystal structure of E. coli YgjK D324N complexed with melibiose | | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose | | 著者 | Miyazaki, T, Ichikawa, M, Yokoi, G, Kitaoka, M, Mori, H, Kitano, Y, Nishikawa, A, Tonozuka, T. | | 登録日 | 2013-03-08 | | 公開日 | 2013-07-17 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structure of a bacterial glycoside hydrolase family 63 enzyme in complex with its glycosynthase product, and insights into the substrate specificity.
Febs J., 280, 2013
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3WPY
 | | Microbacterium saccharophilum K-1 beta-fructofuranosidase mutant T47S/S200T/F447V/P500S | | 分子名称: | Beta-fructofuranosidase | | 著者 | Yokoi, G, Mori, M, Sato, S, Miyazaki, T, Nishikawa, A, Tonozuka, T. | | 登録日 | 2014-01-17 | | 公開日 | 2014-03-12 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Enhancing thermostability and the structural characterization of Microbacterium saccharophilum K-1 beta-fructofuranosidase
Appl.Microbiol.Biotechnol., 98, 2014
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