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3R44
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BU of 3r44 by Molmil
Mycobacterium tuberculosis fatty acyl CoA synthetase
分子名称: HISTIDINE, MALONATE ION, fatty acyl CoA synthetase FADD13 (FATTY-ACYL-CoA SYNTHETASE)
著者Andersson, C.S, Martinez Molina, D, Hogbom, M.
登録日2011-03-17
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Mycobacterium tuberculosis Very-Long-Chain Fatty Acyl-CoA Synthetase: Structural Basis for Housing Lipid Substrates Longer than the Enzyme.
Structure, 20, 2012
7Z3D
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BU of 7z3d by Molmil
XFEL structure of Class Ib ribonucleotide reductase dimanganese(II) NrdF in complex with oxidized NrdI from Bacillus cereus
分子名称: FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, Protein NrdI, ...
著者John, J, Lebrette, H, Aurelius, O, Hogbom, M.
登録日2022-03-02
公開日2022-09-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Redox-controlled reorganization and flavin strain within the ribonucleotide reductase R2b-NrdI complex monitored by serial femtosecond crystallography.
Elife, 11, 2022
7Z3E
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BU of 7z3e by Molmil
XFEL structure of Class Ib ribonucleotide reductase dimanganese(II) NrdF in complex with hydroquinone NrdI from Bacillus cereus
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, MANGANESE (II) ION, Protein NrdI, ...
著者John, J, Lebrette, H, Aurelius, O, Hogbom, M.
登録日2022-03-02
公開日2022-09-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Redox-controlled reorganization and flavin strain within the ribonucleotide reductase R2b-NrdI complex monitored by serial femtosecond crystallography.
Elife, 11, 2022
6Y2N
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BU of 6y2n by Molmil
Crystal structure of ribonucleotide reductase R2 subunit solved by serial synchrotron crystallography
分子名称: FE (III) ION, MANGANESE (III) ION, Ribonucleoside-diphosphate reductase subunit beta
著者Shilova, A, Lebrette, H, Aurelius, O, Hogbom, M, Mueller, U.
登録日2020-02-17
公開日2020-10-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Current status and future opportunities for serial crystallography at MAX IV Laboratory.
J.Synchrotron Radiat., 27, 2020
5EKB
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BU of 5ekb by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (reconstituted in solution)
分子名称: FE (III) ION, MANGANESE (III) ION, PALMITIC ACID, ...
著者Griese, J.J, Hogbom, M.
登録日2015-11-03
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.074 Å)
主引用文献Divergent assembly mechanisms of the manganese/iron cofactors in R2lox and R2c proteins.
J.Inorg.Biochem., 162, 2016
5DCO
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BU of 5dco by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted diiron cofactor (short soak)
分子名称: FE (III) ION, PALMITIC ACID, Ribonucleotide reductase small subunit
著者Griese, J.J, Hogbom, M.
登録日2015-08-24
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.326 Å)
主引用文献Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
5DOR
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BU of 5dor by Molmil
P2 Integrase catalytic domain in space group P21
分子名称: Integrase, PHOSPHATE ION, ZINC ION
著者Skaar, K, Claesson, M, Odegrip, R, Haggard-Ljungquist, E, Hogbom, M.
登録日2015-09-11
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the bacteriophage P2 integrase catalytic domain.
Febs Lett., 589, 2015
3GZD
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BU of 3gzd by Molmil
Human selenocysteine lyase, P1 crystal form
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, NITRATE ION, Selenocysteine lyase
著者Karlberg, T, Hogbom, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
登録日2009-04-07
公開日2009-04-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical discrimination between selenium and sulfur 1: a single residue provides selenium specificity to human selenocysteine lyase.
Plos One, 7, 2012
7QBK
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BU of 7qbk by Molmil
Crystal structure of a second homolog of R2-like ligand-binding oxidase in Sulfolobus acidocaldarius (SaR2loxII)
分子名称: FE (III) ION, MANGANESE (III) ION, R2-like ligand-binding oxidase (homolog II) from Sulfolobus acidocaldarius
著者Lebrette, H, Diamanti, R, Srinivas, V, Hogbom, M.
登録日2021-11-19
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Comparative structural analysis provides new insights into the function of R2-like ligand-binding oxidase.
Febs Lett., 596, 2022
1RSV
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BU of 1rsv by Molmil
azide complex of the diferrous E238A mutant R2 subunit of ribonucleotide reductase
分子名称: AZIDE ION, FE (III) ION, MERCURY (II) ION, ...
著者Assarsson, M, Andersson, M.E, Hogbom, M, Persson, B.O, Sahlin, M, Barra, A.L, Sjoberg, B.M, Nordlund, P, Graslund, A.
登録日2003-12-10
公開日2003-12-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Restoring proper radical generation by azide binding to the iron site of the E238A mutant R2 protein of ribonucleotide reductase from Escherichia coli.
J.Biol.Chem., 276, 2001
5DCR
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BU of 5dcr by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (short soak)
分子名称: FE (III) ION, MANGANESE (III) ION, PALMITIC ACID, ...
著者Griese, J.J, Hogbom, M.
登録日2015-08-24
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
5DCS
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BU of 5dcs by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (long soak)
分子名称: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
著者Griese, J.J, Hogbom, M.
登録日2015-08-24
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor.
J.Biol.Chem., 290, 2015
8BHW
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BU of 8bhw by Molmil
Full-length bacterial polysaccharide co-polymerase WzzE from E. coli. C4 symmetry
分子名称: ECA polysaccharide chain length modulation protein
著者Wiseman, B, Hogbom, M.
登録日2022-11-01
公開日2023-07-26
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Alternating L4 loop architecture of the bacterial polysaccharide co-polymerase WzzE.
Commun Biol, 6, 2023
8BT3
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BU of 8bt3 by Molmil
Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, catalytically active radical state solved by XFEL
分子名称: Ribonucleoside-diphosphate reductase beta chain
著者Lebrette, H, Srinivas, V, Hogbom, M.
登録日2022-11-27
公開日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a ribonucleotide reductase R2 protein radical.
Science, 382, 2023
8BT4
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BU of 8bt4 by Molmil
Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, radical-lost ground state
分子名称: CALCIUM ION, GLYCEROL, Ribonucleoside-diphosphate reductase
著者Lebrette, H, Srinivas, V, Hogbom, M.
登録日2022-11-27
公開日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of a ribonucleotide reductase R2 protein radical.
Science, 382, 2023
5C6K
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BU of 5c6k by Molmil
Bacteriophage P2 integrase catalytic domain
分子名称: Integrase
著者Skaar, K, Claesson, M, Odegrip, R, Eriksson, J, Hogbom, M, Haggard-Ljungquist, E, Stenmark, P.
登録日2015-06-23
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the bacteriophage P2 integrase catalytic domain.
Febs Lett., 589, 2015
3ZR0
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BU of 3zr0 by Molmil
Crystal structure of human MTH1 in complex with 8-oxo-dGMP
分子名称: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION
著者Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
登録日2011-06-13
公開日2011-07-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011
3ZR1
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BU of 3zr1 by Molmil
Crystal structure of human MTH1
分子名称: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, ACETATE ION, SULFATE ION
著者Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
登録日2011-06-13
公開日2011-07-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011
1YLK
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BU of 1ylk by Molmil
Crystal Structure of Rv1284 from Mycobacterium tuberculosis in Complex with Thiocyanate
分子名称: Hypothetical protein Rv1284/MT1322, THIOCYANATE ION, ZINC ION
著者Covarrubias, A.S, Larsson, A.M, Hogbom, M, Lindberg, J, Bergfors, T, Bjorkelid, C, Mowbray, S.L, Unge, T, Jones, T.A, Structural Proteomics in Europe (SPINE)
登録日2005-01-19
公開日2005-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of carbonic anhydrases from Mycobacterium tuberculosis.
J.Biol.Chem., 280, 2005
1YM3
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BU of 1ym3 by Molmil
Crystal Structure of carbonic anhydrase RV3588c from Mycobacterium tuberculosis
分子名称: CARBONIC ANHYDRASE (CARBONATE DEHYDRATASE) (CARBONIC DEHYDRATASE), MAGNESIUM ION, ZINC ION
著者Covarrubias, A.S, Larsson, A.M, Hogbom, M, Lindberg, J, Bergfors, T, Bjorkelid, C, Mowbray, S.L, Unge, T, Jones, T.A, Structural Proteomics in Europe (SPINE)
登録日2005-01-20
公開日2005-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and function of carbonic anhydrases from Mycobacterium tuberculosis.
J.Biol.Chem., 280, 2005
3GZC
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BU of 3gzc by Molmil
Structure of human selenocysteine lyase
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Selenocysteine lyase
著者Collins, R, Hogbom, M, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Karlberg, T, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Uppenberg, J, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Schuler, H, Structural Genomics Consortium (SGC)
登録日2009-04-07
公開日2009-04-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical discrimination between selenium and sulfur 1: a single residue provides selenium specificity to human selenocysteine lyase.
Plos One, 7, 2012
4AC8
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BU of 4ac8 by Molmil
R2-like ligand binding Mn-Fe oxidase from M. tuberculosis with an organized C-terminal helix
分子名称: CALCIUM ION, FE (III) ION, GLYCEROL, ...
著者Andersson, C.S, Berthold, C.L, Hogbom, M.
登録日2011-12-14
公開日2012-09-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A Dynamic C-Terminal Segment in the Mycobacterium Tuberculosis Mn/Fe R2Lox Protein Can Adopt a Helical Structure with Possible Functional Consequences.
Chem.Biodivers., 9, 2012
6YD0
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BU of 6yd0 by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, diferric state
分子名称: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-03-19
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YDU
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BU of 6ydu by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, reoxidized diferric state, 10s O2 exposure.
分子名称: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-03-21
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6F6M
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BU of 6f6m by Molmil
R2-like ligand-binding oxidase Y162F mutant with anaerobically reconstituted Mn/Fe cofactor
分子名称: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
著者Griese, J.J, Hogbom, M.
登録日2017-12-05
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.393 Å)
主引用文献Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase.
J. Biol. Inorg. Chem., 24, 2019

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