6X70
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![BU of 6x70 by Molmil](/molmil-images/mine/6x70) | Rev1-DNA Binary Complex | 分子名称: | DNA (5'-D(*CP*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*G)-3'), DNA repair protein REV1, ... | 著者 | Weaver, T.M, Freudenthal, B.D. | 登録日 | 2020-05-29 | 公開日 | 2020-09-30 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | Visualizing Rev1 catalyze protein-template DNA synthesis. Proc.Natl.Acad.Sci.USA, 117, 2020
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6X77
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![BU of 6x77 by Molmil](/molmil-images/mine/6x77) | |
6X74
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![BU of 6x74 by Molmil](/molmil-images/mine/6x74) | |
5HM4
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![BU of 5hm4 by Molmil](/molmil-images/mine/5hm4) | Crystal structure of oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (TM1226) from THERMOTOGA MARITIMA at 2.0 A resolution | 分子名称: | CALCIUM ION, Mannoside ABC transport system, sugar-binding protein | 著者 | Lu, X, Ghimire-Rijal, S, Myles, D.A.A, Cuneo, M.J. | 登録日 | 2016-01-15 | 公開日 | 2016-11-23 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Periplasmic Binding Protein Dimer Has a Second Allosteric Event Tied to Ligand Binding. Biochemistry, 56, 2017
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6MV6
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![BU of 6mv6 by Molmil](/molmil-images/mine/6mv6) | Crystal structure of RNAse 6 | 分子名称: | PHOSPHATE ION, Ribonuclease K6 | 著者 | Couture, J.-F, Doucet, N. | 登録日 | 2018-10-24 | 公開日 | 2019-11-13 | 最終更新日 | 2020-05-27 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Insights into Structural and Dynamical Changes Experienced by Human RNase 6 upon Ligand Binding. Biochemistry, 59, 2020
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6MV7
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![BU of 6mv7 by Molmil](/molmil-images/mine/6mv7) | Crystal structure of RNAse 6 | 分子名称: | ADENOSINE MONOPHOSPHATE, Ribonuclease K6 | 著者 | Couture, J.-F, Doucet, N. | 登録日 | 2018-10-24 | 公開日 | 2019-11-13 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.59 Å) | 主引用文献 | Insights into Structural and Dynamical Changes Experienced by Human RNase 6 upon Ligand Binding. Biochemistry, 59, 2020
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6NP4
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![BU of 6np4 by Molmil](/molmil-images/mine/6np4) | AAC-VIa bound to Tobramycin | 分子名称: | Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION, TOBRAMYCIN | 著者 | Kumar, P, Cuneo, M.J. | 登録日 | 2019-01-17 | 公開日 | 2019-09-25 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.151 Å) | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6NP1
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![BU of 6np1 by Molmil](/molmil-images/mine/6np1) | |
6NP3
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![BU of 6np3 by Molmil](/molmil-images/mine/6np3) | AAC-VIa bound to Gentamicin | 分子名称: | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION | 著者 | Kumar, P, Cuneo, M.J. | 登録日 | 2019-01-17 | 公開日 | 2019-09-25 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.15 Å) | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6NP5
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![BU of 6np5 by Molmil](/molmil-images/mine/6np5) | AAC-VIa bound to Kanamycin B | 分子名称: | (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION | 著者 | Kumar, P, Cuneo, M.J. | 登録日 | 2019-01-17 | 公開日 | 2019-09-25 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.353 Å) | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6NTJ
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![BU of 6ntj by Molmil](/molmil-images/mine/6ntj) | Neutron/X-ray crystal structure of AAC-VIa bound to gentamicin C1A | 分子名称: | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION | 著者 | Cuneo, M.J, Kumar, P. | 登録日 | 2019-01-29 | 公開日 | 2019-09-25 | 最終更新日 | 2024-04-03 | 実験手法 | NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6NP2
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![BU of 6np2 by Molmil](/molmil-images/mine/6np2) | AAC-VIa bound to Sisomicin | 分子名称: | (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION | 著者 | Kumar, P, Cuneo, M.J. | 登録日 | 2019-01-17 | 公開日 | 2019-09-25 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6NTI
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![BU of 6nti by Molmil](/molmil-images/mine/6nti) | Neutron/X-ray crystal structure of AAC-VIa bound to kanamycin b | 分子名称: | (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside N(3)-acetyltransferase, MAGNESIUM ION | 著者 | Cuneo, M.J, Kumar, P. | 登録日 | 2019-01-29 | 公開日 | 2019-09-25 | 最終更新日 | 2024-04-03 | 実験手法 | NEUTRON DIFFRACTION (2.3 Å), X-RAY DIFFRACTION | 主引用文献 | Low-Barrier and Canonical Hydrogen Bonds Modulate Activity and Specificity of a Catalytic Triad. Angew.Chem.Int.Ed.Engl., 58, 2019
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6W4T
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![BU of 6w4t by Molmil](/molmil-images/mine/6w4t) | APE1 Y269A phosphorothioate substrate complex with abasic DNA | 分子名称: | DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*(48Z)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), DNA-(apurinic or apyrimidinic site) lyase | 著者 | Freudenthal, B.D, Hoitsma, N.M. | 登録日 | 2020-03-11 | 公開日 | 2020-06-17 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.77 Å) | 主引用文献 | AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop. Nucleic Acids Res., 48, 2020
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6W4I
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![BU of 6w4i by Molmil](/molmil-images/mine/6w4i) | APE1 Y269A product complex with abasic DNA | 分子名称: | DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), DNA (5'-D(P*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... | 著者 | Freudenthal, B.D, Hoitsma, N.M. | 登録日 | 2020-03-10 | 公開日 | 2020-06-17 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop. Nucleic Acids Res., 48, 2020
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5EJ3
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![BU of 5ej3 by Molmil](/molmil-images/mine/5ej3) | Crystal structure of XlnB2 | 分子名称: | Endo-1,4-beta-xylanase B | 著者 | Couture, J.-F. | 登録日 | 2015-11-01 | 公開日 | 2016-09-07 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.314 Å) | 主引用文献 | Ligand Binding Enhances Millisecond Conformational Exchange in Xylanase B2 from Streptomyces lividans. Biochemistry, 55, 2016
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7T1B
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![BU of 7t1b by Molmil](/molmil-images/mine/7t1b) | Rev1 Ternary Complex with rCTP and Ca2+ | 分子名称: | CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ... | 著者 | Freudenthal, B.D, Weaver, T.M. | 登録日 | 2021-12-01 | 公開日 | 2022-05-25 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1. Nat Commun, 13, 2022
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7T1A
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![BU of 7t1a by Molmil](/molmil-images/mine/7t1a) | Rev1 Ternary Complex with dATP and Ca2+ | 分子名称: | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ... | 著者 | Freudenthal, B.D, Weaver, T.M. | 登録日 | 2021-12-01 | 公開日 | 2022-05-25 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1. Nat Commun, 13, 2022
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7T19
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![BU of 7t19 by Molmil](/molmil-images/mine/7t19) | Rev1 Ternary Complex with dGTP and Ca2+ | 分子名称: | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ... | 著者 | Freudenthal, B.D, Weaver, T.M. | 登録日 | 2021-12-01 | 公開日 | 2022-05-25 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | 主引用文献 | Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1. Nat Commun, 13, 2022
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7T18
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![BU of 7t18 by Molmil](/molmil-images/mine/7t18) | Rev1 Ternary Complex with dTTP and Ca2+ | 分子名称: | CALCIUM ION, DNA (5'-D(*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*G)-3'), ... | 著者 | Freudenthal, B.D, Weaver, T.M. | 登録日 | 2021-12-01 | 公開日 | 2022-05-25 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Mechanism of nucleotide discrimination by the translesion synthesis polymerase Rev1. Nat Commun, 13, 2022
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7T5C
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![BU of 7t5c by Molmil](/molmil-images/mine/7t5c) | |
7T5D
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![BU of 7t5d by Molmil](/molmil-images/mine/7t5d) | |
7T5E
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![BU of 7t5e by Molmil](/molmil-images/mine/7t5e) | |
7TY1
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![BU of 7ty1 by Molmil](/molmil-images/mine/7ty1) | Crystal structure of apo eosinophil cationic protein (ribonuclease 3) from Macaca fascicularis (MfECP) | 分子名称: | CITRIC ACID, DI(HYDROXYETHYL)ETHER, Eosinophil cationic protein, ... | 著者 | Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N. | 登録日 | 2022-02-11 | 公開日 | 2023-08-16 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Ancestral sequence reconstruction dissects structural and functional differences among eosinophil ribonucleases. J.Biol.Chem., 300, 2024
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5TKI
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![BU of 5tki by Molmil](/molmil-images/mine/5tki) | |