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Salmonella enterica trimeric lipoprotein SadB
分子名称:	INNER MEMBRANE LIPOPROTEIN
著者	Grin, I, Linke, D, Hartmann, M.D.
登録日	2013-09-02
公開日	2014-01-08
最終更新日	2024-05-08
実験手法	X-RAY DIFFRACTION (2.448 Å)
主引用文献	A Trimeric Lipoprotein Assists in Trimeric Autotransporter Biogenesis in Enterobacteria. J.Biol.Chem., 289, 2014

2KXF

Solution structure of the first two RRM domains of FBP-interacting repressor (FIR)
分子名称:	Poly(U)-binding-splicing factor PUF60
著者	Cukier, C.D, Ramos, A, Hollingworth, D, Diaz-Moreno, I, Kelly, G.
登録日	2010-05-04
公開日	2010-08-18
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Molecular basis of FIR-mediated c-myc transcriptional control. Nat.Struct.Mol.Biol., 17, 2010

4W7M

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE. W377S MUTANT
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.15 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

4W7N

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE. Y147S AND W377S DOUBLE MUTANT
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.401 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

4W7J

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.79 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

4W7K

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE. Y147S MUTANT
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

4W7O

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE. G169L, Y147S AND W377S TRIPLE MUTANT
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

4W7L

CRYSTAL STRUCTURE OF A DECOLORIZING PEROXIDASE (DYP) FROM AURICULARIA AURICULA-JUDAE. D168N MUTANT
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Medrano, F.J, Romero, A.
登録日	2014-08-22
公開日	2015-03-11
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem.J., 466, 2015

5N19

Structure of SARS coronavirus main protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide
分子名称:	(S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide, DIMETHYL SULFOXIDE, SARS coronavirus main protease
著者	Zhang, L, Ma, Q, Hilgenfeld, R.
登録日	2017-02-05
公開日	2018-02-28
最終更新日	2024-10-23
実験手法	X-RAY DIFFRACTION (1.62 Å)
主引用文献	Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication To Be Published

5N5O

Structure of SARS coronavirus main protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-cyclopropylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide (Cinnamoyl-cyclopropylalanine-GlnLactam-CO-CO-NH-benzyl)
分子名称:	(2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide, Replicase polyprotein 1ab
著者	Zhang, L, Hilgenfeld, R.
登録日	2017-02-14
公開日	2018-03-07
最終更新日	2024-10-23
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication To Be Published

5NFS

Structure of coxsackievirus B3 3C protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide (cinnamoyl-phenylalanine-GlnLactam-CO-CO-NH-benzyl)
分子名称:	(S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide, Genome polyprotein
著者	Ma, Q, Zhang, L, Hilgenfeld, R.
登録日	2017-03-15
公開日	2018-05-16
最終更新日	2024-10-23
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication To Be Published

5NH0

Structure of human coronavirus NL63 main protease in complex with the alpha-ketoamide tert-Butyl ((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)b- utan-2-yl)carbamate (tert-butyl -GlnLactam-CO-CO-NH-benzyl)
分子名称:	3C-like proteinase, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者	Zhang, L, Hilgenfeld, R.
登録日	2017-03-21
公開日	2018-05-16
最終更新日	2024-11-13
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication To Be Published

6P2B

Tethered PXR-LBD/SRC-1p bound to Garcinoic Acid
分子名称:	(2Z,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydro-2H-1-benzopyran-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid, DIMETHYL SULFOXIDE, Nuclear receptor subfamily 1 group I member 2
著者	Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日	2019-05-21
公開日	2020-04-01
最終更新日	2023-10-11
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Garcinoic Acid Is a Natural and Selective Agonist of Pregnane X Receptor. J.Med.Chem., 63, 2020

5IKG

Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Romero, A, Davo-Siguero, I, Martinez, A.T.
登録日	2016-03-03
公開日	2016-07-13
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase Catalysis Science And Technology, 6, 2016

8PTA

JNK1 covalently bound to BD837 cyclohexenone based inhibitor
分子名称:	GLYCEROL, Mitogen-activated protein kinase 8, methyl (1R,3S)-1-methyl-3-[[3-[[3-methyl-4-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl]carbamoyl]phenyl]carbamoyl]-4-oxidanylidene-cyclohexane-1-carboxylate
著者	Sok, P, Poti, A, Remenyi, A.
登録日	2023-07-13
公開日	2024-07-24
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.41 Å)
主引用文献	Reversible covalent c-Jun N-terminal kinase inhibitors targeting a specific cysteine by precision-guided Michael-acceptor warheads. Nat Commun, 15, 2024

8PT9

JNK1 covalently bound to BD838 cyclohexenone based inhibitor
分子名称:	Mitogen-activated protein kinase 8, methyl (1S,3S)-1-methyl-3-[[3-[[3-methyl-4-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl]carbamoyl]phenyl]carbamoyl]-4-oxidanylidene-cyclohexane-1-carboxylate
著者	Sok, P, Poti, A, Remenyi, A.
登録日	2023-07-13
公開日	2024-07-24
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Reversible covalent c-Jun N-terminal kinase inhibitors targeting a specific cysteine by precision-guided Michael-acceptor warheads. Nat Commun, 15, 2024

8PT8

JNK1 covalently bound to RU135 cyclohexenone based inhibitor
分子名称:	GLYCEROL, Mitogen-activated protein kinase 8, methyl (1R,3R)-1-methyl-3-[[3-[[3-methyl-4-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl]carbamoyl]phenyl]methylcarbamoyl]-4-oxidanylidene-cyclohexane-1-carboxylate
著者	Sok, P, Poti, A, Remenyi, A.
登録日	2023-07-13
公開日	2024-07-24
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.78 Å)
主引用文献	Reversible covalent c-Jun N-terminal kinase inhibitors targeting a specific cysteine by precision-guided Michael-acceptor warheads. Nat Commun, 15, 2024

5IKD

Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase
分子名称:	Dye-decolorizing peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者	Romero, A, Davo-Siguero, I, Martinez, A.T.
登録日	2016-03-03
公開日	2016-07-13
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.109 Å)
主引用文献	Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase Catalysis Science And Technology, 2016

5M1T

PaMucR Phosphodiesterase, c-di-GMP complex
分子名称:	9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, MucR Phosphodiesterase
著者	Hutchin, A, Tews, I, Walsh, M.A.
登録日	2016-10-10
公開日	2017-03-01
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (2.27 Å)
主引用文献	Dimerisation induced formation of the active site and the identification of three metal sites in EAL-phosphodiesterases. Sci Rep, 7, 2017

5I26

Azurin T30R1, crystal form I
分子名称:	Azurin, COPPER (II) ION
著者	Hagelueken, G.
登録日	2016-02-08
公開日	2016-04-13
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.888 Å)
主引用文献	Determination of nitroxide spin label conformations via PELDOR and X-ray crystallography. Phys Chem Chem Phys, 18, 2016

5I28

Azurin T30R1, crystal form II
分子名称:	Azurin, COPPER (II) ION, GLYCEROL
著者	Hagelueken, G.
登録日	2016-02-08
公開日	2016-04-13
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Determination of nitroxide spin label conformations via PELDOR and X-ray crystallography. Phys Chem Chem Phys, 18, 2016

5BYM

Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA
分子名称:	RNA (5'-R(UPGPUPAPCPUPAPUP*A)-3'), Suppressor protein MPT5
著者	Qiu, C, Hall, T.M.T.
登録日	2015-06-10
公開日	2015-09-23
最終更新日	2024-03-06
実験手法	X-RAY DIFFRACTION (2.708 Å)
主引用文献	RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun, 6, 2015

5BZU

Crystal structure of the RNA-binding domain of yeast Puf5p bound to AAT2 RNA
分子名称:	Suppressor protein MPT5, UGUAAUA
著者	Qiu, C, Hall, T.M.T.
登録日	2015-06-11
公開日	2015-09-23
最終更新日	2023-09-27
実験手法	X-RAY DIFFRACTION (2.501 Å)
主引用文献	RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun, 6, 2015

5BZ1

Crystal structure of the RNA-binding domain of yeast Puf5p bound to MFA2 RNA
分子名称:	RNA (5'-R(UPGPUPAPUPUPUPGPUPA)-3'), Suppressor protein MPT5
著者	Qiu, C, Hall, T.M.T.
登録日	2015-06-11
公開日	2015-09-23
最終更新日	2023-09-27
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun, 6, 2015

5BZ5

Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA
分子名称:	RNA (5'-R(UPGPUPAPAPCPUPUPUPA)-3'), Suppressor protein MPT5
著者	Qiu, C, Hall, T.M.T.
登録日	2015-06-11
公開日	2015-09-23
最終更新日	2024-03-06
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun, 6, 2015

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