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3WHB
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BU of 3whb by Molmil
Crystal structure of FadR from Bacillus subtilis, a transcriptional regulator involved in the regulation of fatty acid degradation
分子名称: DODECYL-COA, Fatty acid metabolism regulator protein
著者Fujihashi, M, Nakatani, T, Miki, K.
登録日2013-08-23
公開日2014-03-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Proteins, 82, 2014
3WHC
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BU of 3whc by Molmil
Crystal structure of a transcriptional regulator FadR from Bacillus subtilis in complex with stearoyl-CoA
分子名称: Fatty acid metabolism regulator protein, STEAROYL-COENZYME A
著者Fujihashi, M, Nakatani, T, Miki, K.
登録日2013-08-23
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Proteins, 82, 2014
3WR2
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BU of 3wr2 by Molmil
RNase Po1 complexed with 3'GMP
分子名称: GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease Po1
著者Hara, Y, Katsutani, T, Kobayashi, H, Suzuki, M.
登録日2014-02-13
公開日2015-02-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献RNase Po1 complexed with 3'GMP
to be published
7PB9
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BU of 7pb9 by Molmil
Crystal structure of tandem WH domains of Vps25 from Odinarchaeota
分子名称: Tandem WH domains of Vps25
著者Salzer, R, Bellini, D, Papatziamou, D, Robinson, N.P, Lowe, J.
登録日2021-08-01
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Asgard archaea shed light on the evolutionary origins of the eukaryotic ubiquitin-ESCRT machinery.
Nat Commun, 13, 2022
7PQR
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BU of 7pqr by Molmil
LsAA9A expressed in E. coli
分子名称: ACETATE ION, Auxiliary activity 9, CHLORIDE ION, ...
著者Muderspach, S.J, Metherall, J, Ipsen, J, Rollan, C.H, Norholm, M, Johansen, K.S, Lo Leggio, L.
登録日2021-09-20
公開日2022-08-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
6JMF
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BU of 6jmf by Molmil
Crystal structure of human tyrosine-protein kinase Fes/Fps in complex with compound 4
分子名称: 6-{[(1R,2S)-2-aminocyclohexyl]amino}-5-cyano-2-[(3-methylphenyl)amino]pyridine-3-carboxamide, SULFATE ION, Tyrosine-protein kinase Fes/Fps
著者Baba, D, Hanzawa, H.
登録日2019-03-08
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Novel Pyrido-pyridazinone Derivatives as FER Tyrosine Kinase Inhibitors with Antitumor Activity.
Acs Med.Chem.Lett., 10, 2019
5Y0P
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BU of 5y0p by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP
分子名称: ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, UPF0348 protein B4417_3650
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0S
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BU of 5y0s by Molmil
Crystal structure of apo Thermotoga maritima TmcAL(Form II)
分子名称: 1,2-ETHANEDIOL, Thermotoga maritima TmcAL
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0R
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BU of 5y0r by Molmil
Crystal structure of Thermotoga maritima TmcAL (apo, form I)
分子名称: TmTmcAL(SeMet)
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2018-12-26
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0N
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BU of 5y0n by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with ATP (SeMet derivative)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, UPF0348 protein B4417_3650
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2018-12-26
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0Q
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BU of 5y0q by Molmil
Crystal structure of BsTmcAL bound with AMPCPP
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, UPF0348 protein B4417_3650
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0O
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BU of 5y0o by Molmil
Crystal structure of apo BsTmcAL
分子名称: UPF0348 protein B4417_3650
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0T
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BU of 5y0t by Molmil
Crystal structure of Thermotoga maritima TmcAL bound with alpha-thio ATP(Form II)
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, PENTAETHYLENE GLYCOL, ...
著者Yamashita, S, Tomita, K.
登録日2017-07-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5DMQ
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BU of 5dmq by Molmil
Crystal structure of mouse eRF1 in complex with Reverse Transcriptase (RT) of Moloney Murine Leukemia Virus
分子名称: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
著者Tang, T, Song, H.
登録日2015-09-09
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
8YRP
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BU of 8yrp by Molmil
SARS-CoV-2 Delta Spike in complex with JM-1A
分子名称: JM-1A Heavy Chain, JM-1A Light Chain, Spike glycoprotein
著者Nguyen, V.H.T, Chen, X.
登録日2024-03-21
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YRO
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BU of 8yro by Molmil
SARS-CoV-2 Delta Spike in complex with JL-8C
分子名称: JL-8C Heavy Chain, JL-8C Light Chain, Spike glycoprotein
著者Nguyen, V.H.T, Chen, X.
登録日2024-03-21
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YZ5
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BU of 8yz5 by Molmil
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C
分子名称: Fab heavy chain of JE-5C, Fab light chain of JE-5C, Spike glycoprotein
著者Chen, X, Wu, Y.-M.
登録日2024-04-06
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YZ6
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BU of 8yz6 by Molmil
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain of JH-8B, ...
著者Chen, X, Wu, Y.-M.
登録日2024-04-06
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.55 Å)
主引用文献The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
3KLR
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BU of 3klr by Molmil
Bovine H-protein at 0.88 angstrom resolution
分子名称: GLYCEROL, Glycine cleavage system H protein, SULFATE ION
著者Higashiura, A, Kurakane, T, Matsuda, M, Suzuki, M, Inaka, K, Sato, M, Tanaka, H, Fujiwara, K, Nakagawa, A.
登録日2009-11-09
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
6U5E
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BU of 6u5e by Molmil
RT XFEL structure of CypA solved using celloluse carrier media
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Nango, E, Nakane, T, Young, I.D, Brewster, A.S, Sugahara, M, Tanaka, R, Sauter, N.K, Tono, K, Iwata, S, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
5WR2
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BU of 5wr2 by Molmil
Thermolysin, SFX liganded form with oil-based carrier
分子名称: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
著者Kunishima, N, Naitow, H, Matsuura, Y.
登録日2016-11-29
公開日2017-08-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR4
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BU of 5wr4 by Molmil
Thermolysin, SFX unliganded form with oil-based carrier
分子名称: CALCIUM ION, Thermolysin, ZINC ION
著者Kunishima, N, Naitow, H, Matsuura, Y.
登録日2016-11-29
公開日2017-08-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
6U5G
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BU of 6u5g by Molmil
MicroED structure of a FIB-milled CypA Crystal
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Martynowycz, M.W, Zhao, W, Gonen, T, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法ELECTRON CRYSTALLOGRAPHY (2.5 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
6U5D
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BU of 6u5d by Molmil
RT XFEL structure of CypA solved using LCP injection system
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Wolff, A.M, Young, I.D, Sierra, R.G, Brewster, A.S, Koralek, J.D, Boutet, S, Sauter, N.K, Fraser, J.S, Thompson, M.C.
登録日2019-08-27
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
5WJJ
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BU of 5wjj by Molmil
Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[1,2-b]pyridazine-based p38 MAP Kinase Inhibitors
分子名称: Mitogen-activated protein kinase 14, N-{4-[2-(4-fluoro-3-methylphenyl)imidazo[1,2-b]pyridazin-3-yl]pyridin-2-yl}-2-methyl-1-oxo-1lambda~5~-pyridine-4-carboxamide
著者Snell, G.P, Okada, K, Bragstad, K, Sang, B.-C.
登録日2017-07-23
公開日2018-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of imidazo[1,2-b]pyridazine-based p38 MAP kinase inhibitors.
Bioorg. Med. Chem., 26, 2018

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