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4XP7
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BU of 4xp7 by Molmil
Crystal structure of Human tRNA dihydrouridine synthase 2
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
著者Whelan, F, Jenkins, H.T, Griffiths, S, Byrne, R.T, Dodson, E.J, Antson, A.A.
登録日2015-01-16
公開日2015-01-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献From bacterial to human dihydrouridine synthase: automated structure determination.
Acta Crystallogr.,Sect.D, 71, 2015
4YJM
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BU of 4yjm by Molmil
The apo structure of Agrobacterium tumefaciens ClpS2
分子名称: ATP-dependent Clp protease adapter protein ClpS 2
著者Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2015-03-03
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
4YKA
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BU of 4yka by Molmil
The structure of Agrobacterium tumefaciens ClpS2 in complex with L-tyrosinamide
分子名称: ATP-dependent Clp protease adapter protein ClpS 2, L-TYROSINAMIDE, SULFATE ION
著者Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2015-03-04
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
4Z2B
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BU of 4z2b by Molmil
The structure of human PDE12 residues 161-609 in complex with GSK3036342A
分子名称: 1,2-ETHANEDIOL, 2',5'-phosphodiesterase 12, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Nolte, R.T, Wisely, B, Wang, L, Wood, E.R.
登録日2015-03-29
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.
J.Biol.Chem., 290, 2015
4Z0V
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BU of 4z0v by Molmil
The structure of human PDE12 residues 161-609
分子名称: 2',5'-phosphodiesterase 12, GLYCEROL, MAGNESIUM ION
著者Nolte, R.T, Wisely, B, Wang, L, Wood, E.R.
登録日2015-03-26
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.
J.Biol.Chem., 290, 2015
4YCO
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BU of 4yco by Molmil
E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
登録日2015-02-20
公開日2015-04-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WW1
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BU of 4ww1 by Molmil
Crystal structure of human TCR Alpha Chain-TRAV21-TRAJ8 and Beta Chain-TRBV7-8
分子名称: TCR Alpha Chain-TRAV21-TRAJ8, TCR Beta Chain-TRBV7-8
著者Le Nours, J, Praveena, T, Pellicci, D.G, Lim, R.T, Besra, G, Howell, A.R, Godfrey, D.I, Rossjohn, J, Uldrich, A.P.
登録日2014-11-10
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens.
Nat Commun, 7, 2016
4WW2
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Crystal structure of human TCR Alpha Chain-TRAV21-TRAJ8, Beta Chain-TRBV7-8, Antigen-presenting glycoprotein CD1d, and Beta-2-microglobulin
分子名称: (15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d, ...
著者Le Nours, J, Praveena, T, Pellicci, D, Gherardin, N.A, Lim, R.T, Besra, G, Keshipeddy, S, Richardson, S.K, Howell, A.R, Gras, S, Godfrey, D.I, Rossjohn, J, Uldrich, A.P.
登録日2014-11-10
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens.
Nat Commun, 7, 2016
4WWK
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BU of 4wwk by Molmil
Crystal structure of human TCR Alpha Chain-TRAV12-3, Beta Chain-TRBV6-5, Antigen-presenting molecule CD1d, and Beta-2-microglobulin
分子名称: (15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d, ...
著者Le Nours, J, Praveena, T, Pellicci, D.G, Gherardin, N.A, Lim, R.T, Besra, G, Keshipeddy, A, Richardson, S.K, Howell, A.R, Gras, S, Godfrey, D.I, Rossjohn, J, Uldrich, A.P.
登録日2014-11-11
公開日2016-02-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens.
Nat Commun, 7, 2016
4YCP
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BU of 4ycp by Molmil
E. coli dihydrouridine synthase C (DusC) in complex with tRNATrp
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, SULFATE ION, ...
著者Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
登録日2015-02-20
公開日2015-04-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YJX
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BU of 4yjx by Molmil
The structure of Agrobacterium tumefaciens ClpS2 bound to L-phenylalaninamide
分子名称: ATP-dependent Clp protease adapter protein ClpS 2, PHENYLALANINE AMIDE, SULFATE ION
著者Stein, B, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2015-03-03
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.547 Å)
主引用文献Structural Basis of an N-Degron Adaptor with More Stringent Specificity.
Structure, 24, 2016
6LAA
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BU of 6laa by Molmil
Crystal structure of full-length CYP116B46 from Tepidiphilus thermophilus
分子名称: 1,2-ETHANEDIOL, CARBONATE ION, Cytochrome P450, ...
著者Zhang, L.L, Ko, T.P, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2019-11-12
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural insight into the electron transfer pathway of a self-sufficient P450 monooxygenase.
Nat Commun, 11, 2020
6KQX
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BU of 6kqx by Molmil
Crystal structure of Yijc from B. subtilis in complex with UDP
分子名称: URIDINE-5'-DIPHOSPHATE, Uncharacterized UDP-glucosyltransferase YjiC
著者Hu, Y.M, Dai, L.H, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2019-08-20
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity.
Biochem.Biophys.Res.Commun., 534, 2021
6KQW
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BU of 6kqw by Molmil
Crystal structure of Yijc from B. subtilis
分子名称: CITRIC ACID, Uncharacterized UDP-glucosyltransferase YjiC
著者Hu, Y.M, Dai, L.H, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2019-08-20
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity.
Biochem.Biophys.Res.Commun., 534, 2021
6LDL
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BU of 6ldl by Molmil
Crystal structure of CYP116B46-N(20-445) from Tepidiphilus thermophilus in complex with HEME
分子名称: BICINE, Cytochrome P450, GLYCEROL, ...
著者Zhang, L.L, Xie, Z.Z, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2019-11-21
公開日2020-10-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural insight into the electron transfer pathway of a self-sufficient P450 monooxygenase.
Nat Commun, 11, 2020
6LNH
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BU of 6lnh by Molmil
Crystal structure of IDO from Bacillus thuringiensis
分子名称: FE (III) ION, L-isoleucine-4-hydroxylase, MERCURY (II) ION
著者Feng, Y, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2019-12-30
公開日2021-01-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystal structure of IDO from Bacillus thuringiensis
to be published
6NCJ
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BU of 6ncj by Molmil
Structure of HIV-1 Integrase with potent 5,6,7,8-Tetrahydro-1,6-naphthyridine Derivatives Allosteric Site Inhibitors
分子名称: (2~{S})-2-[4-(8-fluoranyl-5-methyl-3,4-dihydro-2~{H}-chromen-6-yl)-2-methyl-6-[[(1~{S},2~{R})-2-phenylcyclopropyl]methyl]-7,8-dihydro-5~{H}-1,6-naphthyridin-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, 1,2-ETHANEDIOL, Integrase, ...
著者Nolte, R.T.
登録日2018-12-11
公開日2019-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献5,6,7,8-Tetrahydro-1,6-naphthyridine Derivatives as Potent HIV-1-Integrase-Allosteric-Site Inhibitors.
J. Med. Chem., 62, 2019
4PER
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BU of 4per by Molmil
Structure of Gallus gallus ribonuclease inhibitor complexed with Gallus gallus ribonuclease I
分子名称: Angiogenin, Ribonuclease Inhibitor
著者Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
登録日2014-04-24
公開日2014-06-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4Q2Z
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BU of 4q2z by Molmil
Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, GE356, from a non-human primate
分子名称: Heavy chain of Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, Light chain of Fab fragment of HIV vaccine-elicited CD4bs-directed antibody
著者Navis, M, Tran, K, Bale, S, Phad, G, Guenaga, J, Wilson, R, Soldemo, M, McKee, K, Sundling, C, Mascola, J, Li, Y, Wyatt, R.T, Hedestam, G.B.K.
登録日2014-04-10
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献HIV-1 Receptor Binding Site-Directed Antibodies Using a VH1-2 Gene Segment Orthologue Are Activated by Env Trimer Immunization.
Plos Pathog., 10, 2014
4R0D
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BU of 4r0d by Molmil
Crystal structure of a eukaryotic group II intron lariat
分子名称: GROUP IIB INTRON LARIAT, IRIDIUM HEXAMMINE ION, LIGATED EXONS, ...
著者Robart, A.R, Chan, R.T, Peters, J.K, Rajashankar, K.R, Toor, N.
登録日2014-07-30
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.676 Å)
主引用文献Crystal structure of a eukaryotic group II intron lariat.
Nature, 514, 2014
4PEQ
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BU of 4peq by Molmil
Structure of bovine ribonuclease inhibitor complexed with bovine ribonuclease I
分子名称: Ribonuclease pancreatic, Ribonuclease/angiogenin inhibitor 1
著者Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
登録日2014-04-24
公開日2014-06-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4RSD
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BU of 4rsd by Molmil
STRUCTURE OF THE D121A VARIANT OF RIBONUCLEASE A
分子名称: ACETATE ION, CHLORIDE ION, RIBONUCLEASE A
著者Schultz, L.W, Quirk, D.J, Raines, R.T.
登録日1998-02-05
公開日1998-07-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
4RSK
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BU of 4rsk by Molmil
STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A COMPLEXED WITH 3'-UMP
分子名称: 3'-URIDINEMONOPHOSPHATE, RIBONUCLEASE A
著者Schultz, L.W, Fisher, B.M, Raines, R.T.
登録日1998-04-09
公開日1998-12-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Coulombic Effects of Remote Subsites on the Active Site of Ribonuclease A
Biochemistry, 37, 1998
4RQZ
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BU of 4rqz by Molmil
re-refinement of 1soz, Crystal Structure of DegS protease in complex with an activating peptide
分子名称: Protease degS, activating peptide
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR0
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BU of 4rr0 by Molmil
re-refined 1vcw, CRYSTAL STRUCTURE OF DEGS AFTER BACKSOAKING THE ACTIVATING PEPTIDE
分子名称: Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.054 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015

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