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Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
分子名称:	GLYCEROL, Red fluorescent protein eqFP578
著者	Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日	2010-11-09
公開日	2011-05-25
最終更新日	2018-01-24
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore. Protein Sci., 20, 2011

1RDH

CRYSTALLOGRAPHIC ANALYSES OF AN ACTIVE HIV-1 RIBONUCLEASE H DOMAIN SHOW STRUCTURAL FEATURES THAT DISTINGUISH IT FROM THE INACTIVE FORM
分子名称:	HIV-1 REVERSE TRANSCRIPTASE (RIBONUCLEASE H DOMAIN)
著者	Finzel, B.C, Chattopadhyay, D, Einspahr, H.M.
登録日	1993-03-05
公開日	1994-05-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Crystallographic analyses of an active HIV-1 ribonuclease H domain show structural features that distinguish it from the inactive form. Acta Crystallogr.,Sect.D, 49, 1993

3PJ5

Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
分子名称:	Red fluorescent protein eqFP578, SULFATE ION
著者	Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日	2010-11-08
公開日	2011-05-25
最終更新日	2012-02-22
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore. Protein Sci., 20, 2011

5CNA

REFINED STRUCTURE OF CONCANAVALIN A COMPLEXED WITH ALPHA-METHYL-D-MANNOPYRANOSIDE AT 2.0 ANGSTROMS RESOLUTION AND COMPARISON WITH THE SACCHARIDE-FREE STRUCTURE
分子名称:	CALCIUM ION, CHLORIDE ION, CONCANAVALIN A, ...
著者	Naismith, J.H, Emmerich, C, Habash, J, Harrop, S.J, Helliwell, J.R, Hunter, W.N, Raftery, J, Kalb(Gilboa), A.J, Yariv, J.
登録日	1994-02-11
公開日	1994-05-31
最終更新日	2024-03-06
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Refined structure of concanavalin A complexed with methyl alpha-D-mannopyranoside at 2.0 A resolution and comparison with the saccharide-free structure. Acta Crystallogr.,Sect.D, 50, 1994

5EXB

Wild type green fluorescent protein DendFP (Dendronephthya sp.)
分子名称:	GLYCEROL, Green fluorescent protein
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2015-11-23
公開日	2016-08-03
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (1.81 Å)
主引用文献	Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms. Acta Crystallogr D Struct Biol, 72, 2016

4HE4

Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)
分子名称:	Yellow fluorescent protein
著者	Pletneva, N, Pletnev, S, Pletnev, V.Z.
登録日	2012-10-03
公開日	2013-05-29
最終更新日	2023-12-06
実験手法	X-RAY DIFFRACTION (2.05 Å)
主引用文献	Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis. Acta Crystallogr.,Sect.D, 69, 2013

5EXC

Photoconverted red fluorescent protein DendRFP
分子名称:	GLYCEROL, Green fluorescent protein, MAGNESIUM ION
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2015-11-23
公開日	2016-08-03
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (2.14 Å)
主引用文献	Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms. Acta Crystallogr D Struct Biol, 72, 2016

6M9Z

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6G
分子名称:	Fluorescent protein lanFP6G
著者	Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
登録日	2018-08-24
公開日	2019-04-03
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019

6M9Y

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6A
分子名称:	Fluorescent protein lanFP6A
著者	Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
登録日	2018-08-24
公開日	2019-03-13
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (1.35 Å)
主引用文献	Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019

6MAS

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10G
分子名称:	GLYCEROL, Uncharacterized protein
著者	Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
登録日	2018-08-28
公開日	2019-03-13
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019

6M9X

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A
分子名称:	Fluorescent protein lanFP10A
著者	Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
登録日	2018-08-24
公開日	2019-03-13
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (1.81 Å)
主引用文献	Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019

1HET

atomic X-ray structure of liver alcohol dehydrogenase containing a hydroxide adduct to NADH
分子名称:	(4R)-2-METHYLPENTANE-2,4-DIOL, ALCOHOL DEHYDROGENASE E CHAIN, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者	Meijers, R, Morris, R.J, Adolph, H.W, Merli, A, Lamzin, V.S, Cedergen-Zeppezauer, E.S.
登録日	2000-11-25
公開日	2001-05-31
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.15 Å)
主引用文献	On the Enzymatic Activation of Nadh J.Biol.Chem., 276, 2001

4JGE

Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
分子名称:	GLYCEROL, Red fluorescent protein blFP-R5
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2013-03-01
公開日	2013-09-18
最終更新日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.94 Å)
主引用文献	Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013

4JEO

Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
分子名称:	GLYCEROL, Red fluorescent protein blFP-R5
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2013-02-27
公開日	2013-09-18
最終更新日	2023-12-06
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013

4JF9

Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum)
分子名称:	Red fluorescent protein blFP-R5
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2013-02-28
公開日	2013-09-18
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.33 Å)
主引用文献	Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013

4HVF

Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
分子名称:	GLYCEROL, Green fluorescent protein blFP-Y6
著者	Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日	2012-11-06
公開日	2013-09-18
最終更新日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013

5TOV

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in binary complex with NADH
分子名称:	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Adenosylhomocysteinase, CHLORIDE ION
著者	Czyrko, J, Brzezinski, K.
登録日	2016-10-19
公開日	2017-07-05
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies. Int. J. Biol. Macromol., 104, 2017

5TOW

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in ternary complex with NADH and Adenosine
分子名称:	(4S)-2-METHYL-2,4-PENTANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ADENOSINE, ...
著者	Czyrko, J, Brzezinski, K.
登録日	2016-10-19
公開日	2017-07-05
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies. Int. J. Biol. Macromol., 104, 2017

5T3F

hen egg-white lysozyme soaked with selenourea for 10 min
分子名称:	Lysozyme C, selenourea
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
最終更新日	2019-12-04
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

5T3J

Histidinol Phosphate Phosphatase(HPP) soaked with selenourea for 10 min
分子名称:	Inositol monophosphatase, PHOSPHATE ION, selenourea
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
最終更新日	2024-03-06
実験手法	X-RAY DIFFRACTION (2.55 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

5T3I

cyan fluorescence protein soaked with selenourea for 5 min
分子名称:	Green fluorescent protein, PHOSPHATE ION, selenourea
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
最終更新日	2019-12-04
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

5T3H

bovine trypsin soaked with selenourea for 5 min
分子名称:	BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

5T3G

thaumatin soaked with selenourea for 10 min
分子名称:	L(+)-TARTARIC ACID, Thaumatin-1, selenourea
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

5T3L

B-DNA (CGCGAATTCGCG)2 soaked with selenourea for 1 min
分子名称:	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'), selenourea
著者	Luo, Z, Dauter, Z.
登録日	2016-08-25
公開日	2016-11-30
最終更新日	2024-03-06
実験手法	X-RAY DIFFRACTION (1.58 Å)
主引用文献	Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016

1XYZ

A COMMON PROTEIN FOLD AND SIMILAR ACTIVE SITE IN TWO DISTINCT FAMILIES OF BETA-GLYCANASES
分子名称:	1,4-BETA-D-XYLAN-XYLANOHYDROLASE
著者	Alzari, P.M, Spinelli, S, Dominguez, R.
登録日	1995-06-07
公開日	1996-01-29
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	A common protein fold and similar active site in two distinct families of beta-glycanases. Nat.Struct.Biol., 2, 1995

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