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7Y9Y
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BU of 7y9y by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
7Y9X
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BU of 7y9x by Molmil
Structure of the Cas7-11-Csx29-guide RNA complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
7WCI
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BU of 7wci by Molmil
The 0.85 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with two molecules of pelargonic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Kakinouchi, K, Takahashi, J, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
登録日2021-12-20
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献The 0.85 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with two molecules of pelargonic acid
To Be Published
5Y0B
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BU of 5y0b by Molmil
PIG GASTRIC H+,K+ - ATPASE IN COMPLEX with BYK99
分子名称: Potassium-transporting ATPase alpha chain 1, Potassium-transporting ATPase subunit beta
著者Abe, K, Shimokawa, J, Natio, M, Munson, K, Vagin, O, Sachs, G, Suzuki, H, Tani, K, Fujiyoshi, Y.
登録日2017-07-16
公開日2017-08-09
実験手法ELECTRON CRYSTALLOGRAPHY (6.7 Å)
主引用文献The cryo-EM structure of gastric H(+),K(+)-ATPase with bound BYK99, a high-affinity member of K(+)-competitive, imidazo[1,2-a]pyridine inhibitors
Sci Rep, 7, 2017
2HEA
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BU of 2hea by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
登録日1997-09-16
公開日1998-01-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2HEF
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BU of 2hef by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
登録日1997-09-16
公開日1998-01-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2HEB
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BU of 2heb by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
登録日1997-09-16
公開日1998-01-28
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2HEE
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BU of 2hee by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
登録日1997-09-16
公開日1998-01-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
2K6Q
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BU of 2k6q by Molmil
LC3 p62 complex structure
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, p62_peptide from Sequestosome-1
著者Noda, N, Kumeta, H, Nakatogawa, H, Satoo, K, Adachi, W, Ishii, J, Fujioka, Y, Ohsumi, Y, Inagaki, F.
登録日2008-07-17
公開日2008-09-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of target recognition by ATG8/LC3 during selective autophagy
To be Published
2KI3
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BU of 2ki3 by Molmil
Structural and biochemical characterization of FK506 binding domain from Plasmodium vivax
分子名称: 70 kDa peptidylprolyl isomerase, putative
著者Alag, R, Yoon, H.S, Shin, J.
登録日2009-04-21
公開日2010-04-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR assignments of the FK506-binding domain of FK506-binding protein 35 from Plasmodium vivax
Biomol.Nmr Assign., 3, 2009
2KSW
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BU of 2ksw by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for Oryctin
分子名称: Oryctin
著者Horita, S, Ishibashi, J, Nagata, K, Miyakawa, T, Yamakawa, M, Tanokura, M.
登録日2010-01-14
公開日2010-07-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Isolation, cDNA cloning, and structure-based functional characterization of oryctin, a hemolymph protein from the coconut rhinoceros beetle, Oryctes rhinoceros, as a novel serine protease inhibitor
J.Biol.Chem., 285, 2010
2LPV
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BU of 2lpv by Molmil
Solution Structure of FKBP12 from Aedes aegypti
分子名称: FKBP-type peptidyl-prolyl cis-trans isomerase
著者Chakraborty, G, Shin, J.
登録日2012-02-20
公開日2013-02-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of FK506-binding protein 12 from Aedes aegypti.
Proteins, 80, 2012
2M75
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BU of 2m75 by Molmil
The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Recognitions of Integrins
分子名称: Zinc metalloproteinase/disintegrin
著者Chuang, W, Chang, Y, Shiu, J.
登録日2013-04-18
公開日2013-05-22
実験手法SOLUTION NMR
主引用文献The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Recognitions of Integrins
To be Published
5WXE
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BU of 5wxe by Molmil
Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers
分子名称: jasmintide js3
著者Kumari, G, Wong, K.H, Serra, A, Shin, J, Yoon, H.S, Sze, S.K, James, P.T.
登録日2017-01-07
公開日2018-01-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Highly disulfide-constrained antifeedant jasmintides from Jasminum sambac flowers
To Be Published
3WFU
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BU of 3wfu by Molmil
Crystal structure of horse heart myoglobin reconstituted with cobalt(I) tetradehydrocorrin
分子名称: (1R,19R) cobalt tetradehydrocorrin, (1S,19S) cobalt tetradehydrocorrin, Myoglobin, ...
著者Mizohata, E, Morita, Y, Oohora, K, Hirata, K, Ohbayashi, J, Inoue, T, Hisaeda, Y, Hayashi, T.
登録日2013-07-23
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Co(II)/Co(I) reduction-induced axial histidine-flipping in myoglobin reconstituted with a cobalt tetradehydrocorrin as a methionine synthase model.
Chem.Commun.(Camb.), 50, 2014
3WFT
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BU of 3wft by Molmil
Crystal structure of horse heart myoglobin reconstituted with cobalt(II) tetradehydrocorrin
分子名称: (1R,19R) cobalt tetradehydrocorrin, (1S,19S) cobalt tetradehydrocorrin, GLYCEROL, ...
著者Mizohata, E, Morita, Y, Oohora, K, Hirata, K, Ohbayashi, J, Inoue, T, Hisaeda, Y, Hayashi, T.
登録日2013-07-23
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Co(II)/Co(I) reduction-induced axial histidine-flipping in myoglobin reconstituted with a cobalt tetradehydrocorrin as a methionine synthase model.
Chem.Commun.(Camb.), 50, 2014
2ZQO
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BU of 2zqo by Molmil
Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, 29-kDa galactose-binding lectin, CADMIUM ION, ...
著者Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
登録日2008-08-13
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
2ZQN
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BU of 2zqn by Molmil
Crystal structure of the earthworm R-type lectin C-half in complex with Lactose
分子名称: 29-kDa galactose-binding lectin, IMIDAZOLE, PHOSPHATE ION, ...
著者Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
登録日2008-08-13
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
3WVQ
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BU of 3wvq by Molmil
Structure of ATP grasp protein
分子名称: GLYCEROL, PGM1, SULFATE ION
著者Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
登録日2014-06-04
公開日2014-11-19
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3ALZ
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BU of 3alz by Molmil
Crystal structure of the measles virus hemagglutinin bound to its cellular receptor SLAM (Form I)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CDw150, Hemagglutinin
著者Hashiguchi, T, Ose, T, Kubota, M, Maita, N, Kamishikiryo, J, Maenaka, K, Yanagi, Y.
登録日2010-08-11
公開日2011-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4.515 Å)
主引用文献Structure of the measles virus hemagglutinin bound to its cellular receptor SLAM
Nat.Struct.Mol.Biol., 18, 2011
3ALX
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BU of 3alx by Molmil
Crystal structure of the measles virus hemagglutinin bound to its cellular receptor SLAM (MV-H(L482R)-SLAM(N102H/R108Y) fusion)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin,LINKER,CDw150
著者Hashiguchi, T, Ose, T, Kubota, M, Maita, N, Kamishikiryo, J, Maenaka, K, Yanagi, Y.
登録日2010-08-09
公開日2011-01-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of the measles virus hemagglutinin bound to its cellular receptor SLAM
Nat.Struct.Mol.Biol., 18, 2011
3WG3
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BU of 3wg3 by Molmil
Crystal structure of Agrocybe cylindracea galectin with blood type A antigen tetraose
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, ...
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
3WG1
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Crystal structure of Agrocybe cylindracea galectin with lactose
分子名称: Galactoside-binding lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
3WH2
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Human Mincle in complex with citrate
分子名称: C-type lectin domain family 4 member E, CALCIUM ION, CITRATE ANION
著者Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K.
登録日2013-08-21
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA, 110, 2013
3WHD
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C-type lectin, human MCL
分子名称: C-type lectin domain family 4 member D, CALCIUM ION
著者Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K.
登録日2013-08-24
公開日2013-10-23
最終更新日2013-12-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA, 110, 2013

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