Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6W1I
DownloadVisualize
BU of 6w1i by Molmil
Re-interpretation of ppGpp (G4P) electron density in the deposited crystal structure of Xanthine phosphoribosyltransferase (XPRT) (1Y0B).
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, SODIUM ION, Xanthine phosphoribosyltransferase
著者Satyshur, K.A, Anderson, B.W, Keck, J.L, Midwest Center for Structural Genomics (MCSG)
登録日2020-03-04
公開日2020-07-29
最終更新日2021-04-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Mechanism of Regulation of the Purine Salvage Enzyme XPRT by the Alarmones pppGpp, ppGpp, and pGpp.
J.Mol.Biol., 432, 2020
2MA8
DownloadVisualize
BU of 2ma8 by Molmil
Solution NMR Structure of Salmonella typhimurium LT2 Secreted Protein SrfN: Northeast Structural Genomics Consortium Target StR109
分子名称: Putative secreted protein
著者Cort, J.R, Eletsky, A, Adkins, J.N, Burnet, M.C, Parish, D, Liu, K, Sukumaran, D.K, Jiang, M, Cunningham, K, Ma, T, Xiao, R, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2013-06-29
公開日2013-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
2M2J
DownloadVisualize
BU of 2m2j by Molmil
Solution NMR structure of the N-terminal domain of STM1478 from Salmonella typhimurium LT2: Target STR147A of the Northeast Structural Genomics consortium (NESG), and APC101565 of the Midwest Center for Structural Genomics (MCSG).
分子名称: Putative periplasmic protein
著者Houliston, S, Yee, A, Lemak, A, Garcia, M, Wu, B, Savchenko, A, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG)
登録日2012-12-21
公開日2013-05-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
6PU9
DownloadVisualize
BU of 6pu9 by Molmil
Crystal Structure of the Type B Chloramphenicol O-Acetyltransferase from Vibrio vulnificus
分子名称: 1,2-ETHANEDIOL, Acetyltransferase, CHLORIDE ION
著者Kim, Y, Maltseva, N, Mulligan, R, Grimshaw, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-07-17
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of three Type B and C chloramphenicol acetyltransferases from Vibrio species.
Protein Sci., 29, 2020
6PUA
DownloadVisualize
BU of 6pua by Molmil
The 2.0 A Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Kim, Y, Maltseva, N, Stam, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-07-18
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional characterization of three Type B and C chloramphenicol acetyltransferases from Vibrio species.
Protein Sci., 29, 2020
7RJJ
DownloadVisualize
BU of 7rjj by Molmil
Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine
分子名称: CHLORIDE ION, D-ALANINE, OmpA family protein
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-21
公開日2021-07-28
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
8EUA
DownloadVisualize
BU of 8eua by Molmil
Structure of SARS-CoV2 PLpro bound to a covalent inhibitor
分子名称: Papain-like protease nsp3, SULFATE ION, ZINC ION, ...
著者Mathews, I.I, Pokhrel, S, Wakatsuki, S.
登録日2022-10-18
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2.
Nat Commun, 14, 2023
2QH1
DownloadVisualize
BU of 2qh1 by Molmil
Structure of TA289, a CBS-rubredoxin-like protein, in its Fe+2-bound state
分子名称: FE (II) ION, Hypothetical protein Ta0289
著者Singer, A.U, Proudfoot, M, Brown, G, Xu, L, Savchenko, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
登録日2007-06-29
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biochemical and structural characterization of a novel family of cystathionine beta-synthase domain proteins fused to a Zn ribbon-like domain.
J.Mol.Biol., 375, 2008
4RUL
DownloadVisualize
BU of 4rul by Molmil
Crystal structure of full-length E.Coli topoisomerase I in complex with ssDNA
分子名称: DNA topoisomerase 1, GLYCEROL, SULFATE ION, ...
著者Tan, K, Chen, B, Tse-Dinh, Y.C.
登録日2014-11-20
公開日2015-11-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for suppression of hypernegative DNA supercoiling by E. coli topoisomerase I.
Nucleic Acids Res., 43, 2015
7JH3
DownloadVisualize
BU of 7jh3 by Molmil
Crystal structure of 4-aminobutyrate aminotransferase PuuE from Escherichia coli in complex with PLP
分子名称: 4-aminobutyrate aminotransferase PuuE, DI(HYDROXYETHYL)ETHER
著者Valleau, D, Evdokimova, E, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-20
公開日2020-08-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Crystal structure of 4-aminobutyrate aminotransferase PuuE from Escherichia coli in complex with PLP
To Be Published
2R8T
DownloadVisualize
BU of 2r8t by Molmil
Crystal structure of the fructose 1,6-bisphosphatase GlpX from E.coli in the complex with fructose 1,6-bisphosphate
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase class II glpX, UNKNOWN ATOM OR ION
著者Lunin, V.V, Skarina, T, Brown, G, Yakunin, A, Edwards, A.M, Savchenko, A.
登録日2007-09-11
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the fructose 1,6-bisphosphatase GlpX from E.coli in the complex with fructose 1,6-bisphosphate
To be Published
6CQI
DownloadVisualize
BU of 6cqi by Molmil
2.42A Crystal structure of Mycobacterium tuberculosis Topoisomerase I in complex with an oligonucleotide MTS2-11
分子名称: ACETATE ION, DNA (5'-D(P*TP*TP*CP*CP*GP*CP*TP*TP*GP*A)-3'), DNA topoisomerase 1, ...
著者Cao, N, Thirunavukkarasu, A, Tan, K, Tse-Dinh, Y.-C.
登録日2018-03-15
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
6CQ2
DownloadVisualize
BU of 6cq2 by Molmil
Crystal structure of Mycobacterium tuberculosis Topoisomerase I in complex with oligonucleotide MTS2-12 and Magnesium
分子名称: DNA (5'-D(P*TP*TP*CP*CP*GP*CP*TP*TP*GP*A)-3'), DNA topoisomerase 1, MAGNESIUM ION, ...
著者Cao, N, Thirunavukkaraus, A, Tan, K, Tse-Dinh, Y.-C.
登録日2018-03-14
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
6SDA
DownloadVisualize
BU of 6sda by Molmil
Bd2924 C10 acyl-coenzymeA bound form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase, decanoyl-CoA
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
6SD8
DownloadVisualize
BU of 6sd8 by Molmil
Bd2924 apo-form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
7TZP
DownloadVisualize
BU of 7tzp by Molmil
Crystal Structure of Putataive Short-Chain Dehydrogenase/Reductase (FabG) from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 in Complex with NADH
分子名称: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-oxoacyl-ACP reductase, ...
著者Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-02-16
公開日2022-03-02
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7M6B
DownloadVisualize
BU of 7m6b by Molmil
The Crystal Structure of Mcbe1
分子名称: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLMETHIONINE, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2021-03-25
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Target highlights in CASP14: Analysis of models by structure providers.
Proteins, 89, 2021
1YLL
DownloadVisualize
BU of 1yll by Molmil
Crystal Structure of the Conserved Protein of Unknown Function PA5104 from Pseudomonas aeruginosa PAO1
分子名称: conserved hypothetical protein
著者Midwest Center for Structural Genomics (MCSG)
登録日2005-01-19
公開日2005-03-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal Structure of the Conserved Hypothetical Protein PA5104 from Pseudomonas aeruginosa PAO1
To be Published
1SBR
DownloadVisualize
BU of 1sbr by Molmil
The structure and function of B. subtilis YkoF gene product: the complex with thiamin
分子名称: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, CALCIUM ION, ykoF
著者Devedjiev, Y, Surendranath, Y, Derewenda, U, Derewenda, Z.S.
登録日2004-02-11
公開日2004-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure and Ligand Binding Properties of the B.subtilis YkoF Gene Product, a Member of a Novel Family of Thiamin/HMP-binding Proteins
J.Mol.Biol., 343, 2004
6OX6
DownloadVisualize
BU of 6ox6 by Molmil
Crystal structure of the complex between the Type VI effector Tas1 and its immunity protein
分子名称: ACETATE ION, PA14_01140, Tas1
著者Ahmad, S, Stogios, P.J, Skarina, T, Whitney, J, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-05-13
公開日2019-09-18
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp.
Nature, 575, 2019
8EZR
DownloadVisualize
BU of 8ezr by Molmil
Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, native protein
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, HipS(Lp), ...
著者Stogios, P.J, Skarina, T, Michalska, K, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-11-01
公開日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, native protein
To Be Published
8EZT
DownloadVisualize
BU of 8ezt by Molmil
Crystal structure of HipB(Lp) from Legionella pneumophila
分子名称: CHLORIDE ION, HipB(Lp)
著者Stogios, P.J, Skarina, T, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-11-01
公開日2023-09-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structure of HipB(Lp) from Legionella pneumophila
To Be Published
8EZS
DownloadVisualize
BU of 8ezs by Molmil
Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, Sel-met protein
分子名称: CHLORIDE ION, HipS(Lp), HipT(Lp)
著者Stogios, P.J, Skarina, T, Michalska, K, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2022-11-01
公開日2023-09-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, Sel-met protein
To Be Published
1S99
DownloadVisualize
BU of 1s99 by Molmil
The structure and function of B. subtilis YkoF gene product: ligand free protein
分子名称: ACETATE ION, CALCIUM ION, ykoF
著者Devedjiev, Y, Surendranath, Y, Derewenda, U, Derewenda, Z.S.
登録日2004-02-04
公開日2004-10-05
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Structure and Ligand Binding Properties of the B.subtilis YkoF Gene Product, a Member of a Novel Family of Thiamin/HMP-binding Proteins
J.Mol.Biol., 343, 2004
4RXI
DownloadVisualize
BU of 4rxi by Molmil
Structure of C-terminal domain of uncharacterized protein from Legionella pneumophila
分子名称: hypothetical protein lpg0944
著者Cuff, M, Nocek, B, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-12-11
公開日2015-05-06
最終更新日2017-01-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon