Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1IZ0
DownloadVisualize
BU of 1iz0 by Molmil
Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: QUINONE OXIDOREDUCTASE, SULFATE ION
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003
1IV3
DownloadVisualize
BU of 1iv3 by Molmil
Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms)
分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MAGNESIUM ION
著者Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-11
公開日2002-09-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.
Acta Crystallogr.,Sect.D, 59, 2003
1IWK
DownloadVisualize
BU of 1iwk by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(112K) Cytochrome P450cam
分子名称: CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
著者Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-05-15
公開日2002-06-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1ILE
DownloadVisualize
BU of 1ile by Molmil
ISOLEUCYL-TRNA SYNTHETASE
分子名称: ISOLEUCYL-TRNA SYNTHETASE, ZINC ION
著者Nureki, O, Vassylyev, D.G, Tateno, M, Shimada, A, Nakama, T, Fukai, S, Konno, M, Schimmel, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-02-24
公開日1999-04-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Enzyme structure with two catalytic sites for double-sieve selection of substrate.
Science, 280, 1998
1IYZ
DownloadVisualize
BU of 1iyz by Molmil
Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE
著者Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-09-17
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition
J.Bacteriol., 185, 2003
1IZO
DownloadVisualize
BU of 1izo by Molmil
Cytochrome P450 BS beta Complexed with Fatty Acid
分子名称: Cytochrome P450 152A1, PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE
著者Lee, D.S, Yamada, A, Sugimoto, H, Matsunaga, I, Ogura, H, Ichihara, K, Adachi, S, Park, S.Y, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-10-10
公開日2003-03-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate Recognition and Molecular Mechanism of Fatty Acid Hydroxylation by Cytochrome P450 from Bacillus subtilis. CRYSTALLOGRAPHIC, SPECTROSCOPIC, AND MUTATIONAL STUDIES.
J.Biol.Chem., 278, 2003
3GFL
DownloadVisualize
BU of 3gfl by Molmil
Crystal structure of the ST1710 mutant (R90A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GF2
DownloadVisualize
BU of 3gf2 by Molmil
Crystal structure of the hypothetical regulator ST1710 complexed with sodium salicylate
分子名称: 146aa long hypothetical transcriptional regulator, 2-HYDROXYBENZOIC ACID
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GEZ
DownloadVisualize
BU of 3gez by Molmil
Crystal Structure of the hypothetical egulator from Sulfolobus tokodaii 7
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFJ
DownloadVisualize
BU of 3gfj by Molmil
Crystal structure of the ST1710 mutant (R89A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFI
DownloadVisualize
BU of 3gfi by Molmil
Crystal structure of ST1710 complexed with its promoter DNA
分子名称: 146aa long hypothetical transcriptional regulator, 5'-D(*TP*AP*AP*CP*AP*AP*TP*AP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*GP*CP*TP*AP*TP*TP*GP*T)-3'
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFM
DownloadVisualize
BU of 3gfm by Molmil
Crystal structure of the ST1710 mutant (K91A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3HPD
DownloadVisualize
BU of 3hpd by Molmil
Structure of hydroxyethylthiazole kinase protein from pyrococcus horikoshii OT3
分子名称: Hydroxyethylthiazole kinase, PHOSPHATE ION
著者Jeyakanthan, J, Thamotharan, S, Kuramitsu, S, Yokoyama, S, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-06-04
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of Hydroxyethylthiazole Kinase Protein from Pyrococcus Horikoshii Ot3
To be Published
1KA9
DownloadVisualize
BU of 1ka9 by Molmil
Imidazole Glycerol Phosphate Synthase
分子名称: imidazole glycerol phosphate synthase
著者Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-01
公開日2002-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1KH3
DownloadVisualize
BU of 1kh3 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitor
分子名称: ARGININE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
著者goto, m, Hirotsu, k, miyahara, i, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-11-29
公開日2003-04-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of Argininosuccinate Synthetase in Enzyme-ATP Substrates and Enzyme-AMP Product Forms: STEREOCHEMISTRY OF THE CATALYTIC REACTION
J.Biol.Chem., 278, 2003
3IE1
DownloadVisualize
BU of 3ie1 by Molmil
Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA
分子名称: CITRATE ANION, RNA (5'-R(P*UP*UP*UP*U)-3'), Ribonuclease TTHA0252, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA
To be Published
3IE2
DownloadVisualize
BU of 3ie2 by Molmil
Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8
To be Published
1KN0
DownloadVisualize
BU of 1kn0 by Molmil
Crystal Structure of the human Rad52 protein
分子名称: Rad52
著者Kagawa, W, Kurumizaka, H, Ishitani, R, Fukai, S, Nureki, O, Shibata, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-12-18
公開日2002-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form.
Mol.Cell, 10, 2002
3IDZ
DownloadVisualize
BU of 3idz by Molmil
Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8
分子名称: CITRATE ANION, Ribonuclease TTHA0252, SULFATE ION, ...
著者Ishikawa, H, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-22
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8
To be Published
1IR6
DownloadVisualize
BU of 1ir6 by Molmil
Crystal structure of exonuclease RecJ bound to manganese
分子名称: MANGANESE (II) ION, exonuclease RecJ
著者Yamagata, A, Kakuta, Y, Masui, R, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-09-11
公開日2002-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.
Proc.Natl.Acad.Sci.USA, 99, 2002
1IV1
DownloadVisualize
BU of 1iv1 by Molmil
Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase
分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
著者Kishida, H, Wada, T, Unzai, S, Kuzuyama, T, Terada, T, Sirouzu, M, Yokoyama, S, Tame, J.R.H, Park, S.-Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-11
公開日2002-09-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.
Acta Crystallogr.,Sect.D, 59, 2003
1IW1
DownloadVisualize
BU of 1iw1 by Molmil
Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state
分子名称: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
著者Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-04
公開日2003-04-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae.
J.Biol.Chem., 279, 2004
1IWJ
DownloadVisualize
BU of 1iwj by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(109K) Cytochrome P450cam
分子名称: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
著者Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-05-15
公開日2002-06-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1J1H
DownloadVisualize
BU of 1j1h by Molmil
Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus
分子名称: Small Protein B
著者Someya, T, Nameki, N, Hosoi, H, Suzuki, S, Hatanaka, H, Fujii, M, Terada, T, Shirouzu, M, Inoue, Y, Shibata, T, Kuramitsu, S, Yokoyama, S, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-04
公開日2003-02-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus
FEBS Lett., 535, 2003
1J20
DownloadVisualize
BU of 1j20 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
分子名称: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
著者Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-24
公開日2003-04-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon