1X0M
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![BU of 1x0m by Molmil](/molmil-images/mine/1x0m) | a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3 | 分子名称: | Aminotransferase II Homologue | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-03-24 | 公開日 | 2005-04-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of a human kynurenine aminotransferase II homologue from Pyrococcus horikoshii OT3 at 2.20 A resolution Proteins, 61, 2005
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1WSG
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![BU of 1wsg by Molmil](/molmil-images/mine/1wsg) | Co-crystal structure of E.coli RNase HI active site mutant (E48A/D134N*) with Mn2+ | 分子名称: | MANGANESE (II) ION, Ribonuclease HI | 著者 | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | 登録日 | 2004-11-05 | 公開日 | 2005-02-08 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography J.Mol.Biol., 345, 2005
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2Z1H
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![BU of 2z1h by Molmil](/molmil-images/mine/2z1h) | Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T92K/Q105K/Q113R/Q115K/N143K/T145K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z1G
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![BU of 2z1g by Molmil](/molmil-images/mine/2z1g) | Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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3ATH
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![BU of 3ath by Molmil](/molmil-images/mine/3ath) | Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with four AKGs as substrates and allosteric effectors | 分子名称: | 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2011-01-05 | 公開日 | 2012-01-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.69 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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3AV7
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![BU of 3av7 by Molmil](/molmil-images/mine/3av7) | Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, KYN as substrates and KYA as products | 分子名称: | (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-hydroxyquinoline-2-carboxylic acid, ... | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2011-02-23 | 公開日 | 2012-03-07 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structural insight into kynurenic acid excretion mechanisms of kynurenine aminotransferase in the hyperthermophilic archaeon Pyrococcus horikoshii To be Published
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2Z1I
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![BU of 2z1i by Molmil](/molmil-images/mine/2z1i) | Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z1J
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![BU of 2z1j by Molmil](/molmil-images/mine/2z1j) | Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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3AOW
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![BU of 3aow by Molmil](/molmil-images/mine/3aow) | Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with AKG | 分子名称: | 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-10-07 | 公開日 | 2011-10-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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3AOV
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![BU of 3aov by Molmil](/molmil-images/mine/3aov) | Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PLP | 分子名称: | PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-10-07 | 公開日 | 2011-10-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.72 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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2Z8Z
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![BU of 2z8z by Molmil](/molmil-images/mine/2z8z) | Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase | 分子名称: | CALCIUM ION, Lipase, PLATINUM (II) ION, ... | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-09-13 | 公開日 | 2007-10-30 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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2Z8X
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![BU of 2z8x by Molmil](/molmil-images/mine/2z8x) | Crystal structure of extracellular lipase from Pseudomonas sp. MIS38 | 分子名称: | CALCIUM ION, Lipase, ZINC ION | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-09-11 | 公開日 | 2007-10-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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2ZWO
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![BU of 2zwo by Molmil](/molmil-images/mine/2zwo) | Crystal structure of Ca2 site mutant of Pro-S324A | 分子名称: | CALCIUM ION, Tk-subtilisin | 著者 | Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2008-12-17 | 公開日 | 2009-06-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon. Biochemistry, 48, 2009
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2ZWP
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![BU of 2zwp by Molmil](/molmil-images/mine/2zwp) | Crystal structure of Ca3 site mutant of Pro-S324A | 分子名称: | CALCIUM ION, Tk-subtilisin | 著者 | Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2008-12-17 | 公開日 | 2009-06-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon. Biochemistry, 48, 2009
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2E4L
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![BU of 2e4l by Molmil](/molmil-images/mine/2e4l) | Thermodynamic and Structural Analysis of Thermolabile RNase HI from Shewanella oneidensis MR-1 | 分子名称: | Ribonuclease HI | 著者 | Tadokoro, T, You, D.J, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2006-12-13 | 公開日 | 2007-05-01 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural, thermodynamic, and mutational analyses of a psychrotrophic RNase HI. Biochemistry, 46, 2007
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2EHG
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![BU of 2ehg by Molmil](/molmil-images/mine/2ehg) | |
2D0B
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![BU of 2d0b by Molmil](/molmil-images/mine/2d0b) | Crystal structure of Bst-RNase HIII in complex with Mg2+ | 分子名称: | MAGNESIUM ION, ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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2D0C
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![BU of 2d0c by Molmil](/molmil-images/mine/2d0c) | Crystal structure of Bst-RNase HIII in complex with Mn2+ | 分子名称: | MANGANESE (II) ION, ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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2D0A
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![BU of 2d0a by Molmil](/molmil-images/mine/2d0a) | Crystal structure of Bst-RNase HIII | 分子名称: | ribonuclease HIII | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2005-07-31 | 公開日 | 2006-07-18 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
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3AHP
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![BU of 3ahp by Molmil](/molmil-images/mine/3ahp) | Crystal structure of stable protein, CutA1, from a psychrotrophic bacterium Shewanella sp. SIB1 | 分子名称: | CutA1 | 著者 | Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-04-26 | 公開日 | 2011-01-05 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of stable protein CutA1 from psychrotrophic bacterium Shewanella sp. SIB1 J.SYNCHROTRON RADIAT., 18, 2011
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2YV0
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![BU of 2yv0 by Molmil](/molmil-images/mine/2yv0) | Structural and Thermodynamic Analyses of E. coli ribonuclease HI Variant with Quintuple Thermostabilizing Mutations | 分子名称: | Ribonuclease HI | 著者 | Haruki, M, Motegi, T, Tadokoro, T, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-04-06 | 公開日 | 2008-03-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations. Febs J., 274, 2007
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2Z58
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![BU of 2z58 by Molmil](/molmil-images/mine/2z58) | Crystal structure of G56W-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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3A3O
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![BU of 3a3o by Molmil](/molmil-images/mine/3a3o) | Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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3A70
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![BU of 3a70 by Molmil](/molmil-images/mine/3a70) | Crystal structure of Pseudomonas sp. MIS38 lipase in complex with diethyl phosphate | 分子名称: | ACETATE ION, CALCIUM ION, DIETHYL PHOSPHONATE, ... | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-09-10 | 公開日 | 2010-05-26 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
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3A3N
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![BU of 3a3n by Molmil](/molmil-images/mine/3a3n) | Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the two C-terminal residues | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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