Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6IHB
DownloadVisualize
BU of 6ihb by Molmil
Adeno-Associated Virus 2 in complex with AAVR
分子名称: Capsid protein VP1, Dyslexia-associated protein KIAA0319-like protein
著者Lou, Z.Y, Zhang, R.
登録日2018-09-29
公開日2019-03-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Adeno-associated virus 2 bound to its cellular receptor AAVR.
Nat Microbiol, 4, 2019
6IH9
DownloadVisualize
BU of 6ih9 by Molmil
Adeno-Associated Virus 2 at 2.8 ang
分子名称: Capsid protein VP1
著者Lou, Z.Y, Zhang, R.
登録日2018-09-29
公開日2019-07-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Adeno-associated virus 2 bound to its cellular receptor AAVR.
Nat Microbiol, 4, 2019
5W1E
DownloadVisualize
BU of 5w1e by Molmil
PobR in complex with PHB
分子名称: GLYCEROL, P-HYDROXYBENZOIC ACID, Putative transcriptional regulator, ...
著者Page, R, Peti, W, Lord, D.M, Bajaj, R, Zhang, R.
登録日2017-06-02
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献A peculiar IclR family transcription factor regulates para-hydroxybenzoate catabolism in Streptomyces coelicolor.
Nucleic Acids Res., 46, 2018
6UVI
DownloadVisualize
BU of 6uvi by Molmil
Crystal structure of alr1298, a pentapeptide repeat protein from Nostoc Pcc 7120, determined at 2.3 Angstrom resolution
分子名称: Alr1298 protein
著者Kennedy, M.A, Zhang, R.
登録日2019-11-02
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Alr1298, a pentapeptide repeat protein from the cyanobacterium Nostoc sp. PCC 7120, determined at 2.1 angstrom resolution.
Proteins, 88, 2020
6UV7
DownloadVisualize
BU of 6uv7 by Molmil
Crystal structure of alr1298, a pentapeptide repeat protein from Nostoc Pcc 7120, determined at 2.3 Angstrom resolution
分子名称: Alr1298 protein
著者Kennedy, M.A, Zhang, R.
登録日2019-11-01
公開日2020-03-04
最終更新日2020-08-12
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of Alr1298, a pentapeptide repeat protein from the cyanobacterium Nostoc sp. PCC 7120, determined at 2.1 angstrom resolution.
Proteins, 88, 2020
1XBW
DownloadVisualize
BU of 1xbw by Molmil
1.9A Crystal Structure of the protein isdG from Staphylococcus aureus aureus, Structural genomics, MCSG
分子名称: hypothetical protein isdG
著者Zhang, R, Wu, R, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-08-31
公開日2004-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Staphylococcus aureus IsdG and IsdI, heme-degrading enzymes with structural similarity to monooxygenases.
J.Biol.Chem., 280, 2005
5Y8E
DownloadVisualize
BU of 5y8e by Molmil
Crystal Structure of a prokaryotic SEFIR domain
分子名称: Sefir domain protein
著者Zhang, R, Ye, S, Zhu, Y, Yang, H.
登録日2017-08-21
公開日2018-04-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献Structure of a prokaryotic SEFIR domain reveals two novel SEFIR-SEFIR interaction modes.
J. Struct. Biol., 203, 2018
6JCR
DownloadVisualize
BU of 6jcr by Molmil
AAV1 in neutral condition at 3.07 Ang
分子名称: Capsid protein
著者Lou, Z, Zhang, R.
登録日2019-01-30
公開日2019-10-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Divergent engagements between adeno-associated viruses with their cellular receptor AAVR.
Nat Commun, 10, 2019
6JCQ
DownloadVisualize
BU of 6jcq by Molmil
AAV1 in complex with AAVR
分子名称: Capsid protein, Dyslexia-associated protein KIAA0319-like protein
著者Lou, Z, Zhang, R.
登録日2019-01-30
公開日2019-10-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Divergent engagements between adeno-associated viruses with their cellular receptor AAVR.
Nat Commun, 10, 2019
6JCT
DownloadVisualize
BU of 6jct by Molmil
AAV5 in neutral condition at 3.18 Ang
分子名称: Capsid protein
著者Lou, Z, Zhang, R.
登録日2019-01-30
公開日2019-07-31
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Divergent engagements between adeno-associated viruses with their cellular receptor AAVR.
Nat Commun, 10, 2019
3PYW
DownloadVisualize
BU of 3pyw by Molmil
The structure of the SLH domain from B. anthracis surface array protein at 1.8A
分子名称: S-layer protein sap, SULFATE ION
著者Zhang, R, Wilton, R, Kern, J, Joachimiak, A, Schneewind, O, Midwest Center for Structural Genomics (MCSG)
登録日2010-12-13
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Surface Layer Homology (SLH) Domains from Bacillus anthracis Surface Array Protein.
J.Biol.Chem., 286, 2011
3IJ8
DownloadVisualize
BU of 3ij8 by Molmil
Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
分子名称: (2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol, 5-fluoro-alpha-L-idopyranose, CALCIUM ION, ...
著者Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
登録日2009-08-04
公開日2009-10-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
3IJ7
DownloadVisualize
BU of 3ij7 by Molmil
Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
分子名称: 4-O-methyl-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranosyl fluoride, 4-O-methyl-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-2)-5-fluoro-alpha-L-idopyranose, CALCIUM ION, ...
著者Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
登録日2009-08-03
公開日2009-10-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
3IJ9
DownloadVisualize
BU of 3ij9 by Molmil
Directed 'in situ' Elongation as a Strategy to Characterize the Covalent Glycosyl-Enzyme Catalytic Intermediate of Human Pancreatic a-Amylase
分子名称: (2R,3S,4R,5R,6R)-2,6-difluoro-2-(hydroxymethyl)tetrahydro-2H-pyran-3,4,5-triol, CALCIUM ION, CHLORIDE ION, ...
著者Li, C, Zhang, R, Withers, S.G, Brayer, G.D.
登録日2009-08-04
公開日2009-10-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Directed "in situ" inhibitor elongation as a strategy to structurally characterize the covalent glycosyl-enzyme intermediate of human pancreatic alpha-amylase
Biochemistry, 48, 2009
5Y8F
DownloadVisualize
BU of 5y8f by Molmil
Crystal Structure of a prokaryotic SEFIR domain
分子名称: Sefir domain protein
著者Zhang, R, Ye, S, Zhu, Y, Yang, H.
登録日2017-08-21
公開日2018-04-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a prokaryotic SEFIR domain reveals two novel SEFIR-SEFIR interaction modes.
J. Struct. Biol., 203, 2018
6KDU
DownloadVisualize
BU of 6kdu by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: ADENOSINE MONOPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, ...
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-07-02
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity.
Acta Crystallogr D Struct Biol, 77, 2021
6KSD
DownloadVisualize
BU of 6ksd by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, SULFATE ION
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-08-23
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity.
Acta Crystallogr D Struct Biol, 77, 2021
6KRH
DownloadVisualize
BU of 6krh by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: ADENOSINE MONOPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, ...
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-08-21
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity.
Acta Crystallogr D Struct Biol, 77, 2021
6KSC
DownloadVisualize
BU of 6ksc by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase A, SULFATE ION
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-08-23
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity.
Acta Crystallogr D Struct Biol, 77, 2021
6LW8
DownloadVisualize
BU of 6lw8 by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: (4R)-4-(4-fluorophenyl)-4,5,6,7-tetrahydro-1H-imidazo[4,5-c]pyridine, DNA ligase A, GLYCEROL, ...
著者Ramachandran, R, Afsar, M, Shukla, A.
登録日2020-02-07
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD + -dependent DNA ligase A.
J.Struct.Biol., 213, 2021
6KJM
DownloadVisualize
BU of 6kjm by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: ADENOSINE MONOPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, ...
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-07-22
公開日2020-07-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD + -dependent DNA ligase A.
J.Struct.Biol., 213, 2021
1RZ2
DownloadVisualize
BU of 1rz2 by Molmil
1.6A crystal structure of the protein BA4783/Q81L49 (similar to sortase B) from Bacillus anthracis.
分子名称: conserved hypothetical protein BA4783
著者Wu, R, Zhang, R, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2003-12-23
公開日2004-07-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of sortase B from Staphylococcus aureus and Bacillus anthracis reveal catalytic amino acid triad in the active site.
Structure, 12, 2004
6KKV
DownloadVisualize
BU of 6kkv by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
分子名称: DNA ligase A, N-[(4-methylphenyl)methyl]-1H-pyrrole-2-carboxamide, SULFATE ION
著者Ramachandran, R, Shukla, A, Afsar, M.
登録日2019-07-27
公開日2020-07-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD + -dependent DNA ligase A.
J.Struct.Biol., 213, 2021
1SQE
DownloadVisualize
BU of 1sqe by Molmil
1.5A Crystal Structure Of the protein PG130 from Staphylococcus aureus, Structural genomics
分子名称: hypothetical protein PG130
著者Zhang, R, Wu, R, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-03-18
公開日2004-08-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Staphylococcus aureus IsdG and IsdI, heme-degrading enzymes with structural similarity to monooxygenases
J.Biol.Chem., 280, 2005
3FFA
DownloadVisualize
BU of 3ffa by Molmil
Crystal Structure of a fast activating G protein mutant
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
著者Chauhan, R, Kapoor, N.
登録日2008-12-02
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural evidence for a sequential release mechanism for activation of heterotrimeric g proteins.
J.Mol.Biol., 393, 2009

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon