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1LX8
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BU of 1lx8 by Molmil
Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein
Descriptor: Excisionase
Authors:Sam, M.D, Papagiannis, C, Connolly, K.M, Corselli, L, Iwahara, J, Lee, J, Phillips, M, Wojciak, J.M, Johnson, R.C, Clubb, R.T.
Deposit date:2002-06-04
Release date:2003-06-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein
J.Mol.Biol., 324, 2002
1RH6
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BU of 1rh6 by Molmil
Bacteriophage Lambda Excisionase (Xis)-DNA Complex
Descriptor: 5'-D(*CP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*G)-3', 5'-D(P*CP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*G)-3', Excisionase
Authors:Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2003-11-13
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the excisionase-DNA complex from bacteriophage lambda.
J.Mol.Biol., 338, 2004
2IEF
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BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
Descriptor: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
Authors:Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2006-09-18
Release date:2007-02-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2OG0
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BU of 2og0 by Molmil
Crystal Structure of the Lambda Xis-DNA complex
Descriptor: 5'-D(*AP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*AP*TP*AP*C)-3', 5'-D(*GP*TP*AP*TP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*T)-3', Excisionase
Authors:Papagiannis, C.V, Sam, M.D, Abbani, M.A, Cascio, D, Yoo, D, Clubb, R.T, Johnson, R.C.
Deposit date:2007-01-04
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fis targets assembly of the xis nucleoprotein filament to promote excisive recombination by phage lambda.
J.Mol.Biol., 367, 2007
2WCC
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BU of 2wcc by Molmil
phage lambda IntDBD1-64 complex with p prime 2 DNA
Descriptor: DNA (5'-D(*DCP*DGP*DAP*DGP*DTP*DCP*DAP *DAP*DAP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DAP*DTP*DTP*DTP*DTP*DGP *DAP*DCP*DTP*DGP*DC)-3'), INTEGRASE
Authors:Fadeev, E.A, Sam, M.D, Clubb, R.T.
Deposit date:2009-03-11
Release date:2009-04-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of the Amino-Terminal Domain of the Lambda Integrase Protein in Complex with DNA: Immobilization of a Flexible Tail Facilitates Beta- Sheet Recognition of the Major Groove.
J.Mol.Biol., 388, 2009
7KFL
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BU of 7kfl by Molmil
Crystal structure of the cargo-binding domain from the plant class XI myosin (MyoXIk)
Descriptor: Myosin-17
Authors:Turowski, V.R, Ruiz, D.M, Nascimento, A.F.Z, Millan, C, Sammito, M.D, Juanhuix, J, Cremonesi, A.S, Uson, I, Giuseppe, P.O, Murakami, M.T.
Deposit date:2020-10-14
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the class XI myosin globular tail reveals evolutionary hallmarks for cargo recognition in plants.
Acta Crystallogr D Struct Biol, 77, 2021
1BUA
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BU of 1bua by Molmil
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*CP*IP*TP*CP*TP*T)-3'), ENDONUCLEASE ECORV
Authors:Perona, J.J, Martin, A.M.
Deposit date:1998-09-03
Release date:1998-09-09
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease.
Nat.Struct.Biol., 6, 1999
1BSU
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BU of 1bsu by Molmil
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), DNA (5'-D(P*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), ...
Authors:Perona, J.J, Martin, A.M.
Deposit date:1998-08-30
Release date:1998-09-09
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease.
Nat.Struct.Biol., 6, 1999
9EQF
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BU of 9eqf by Molmil
Crystal structure of the L-arginine hydroxylase VioC MeHis316, bound to Fe(II), L-arginine, and succinate
Descriptor: 1,2-ETHANEDIOL, ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, ...
Authors:Hardy, F.J.
Deposit date:2024-03-21
Release date:2024-07-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Probing Ferryl Reactivity in a Nonheme Iron Oxygenase Using an Expanded Genetic Code.
Acs Catalysis, 14, 2024
9C6M
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BU of 9c6m by Molmil
Yasminevirus c12orf29, a 5' to 3' RNA ligase, K73M mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, RNA ligase1
Authors:Hu, Y, Lopez, V.A, Tagliabracci, V.S, Tomchick, D.R.
Deposit date:2024-06-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Biochemical and structural insights into a 5' to 3' RNA ligase reveal a potential role in tRNA ligation
To Be Published
9F18
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BU of 9f18 by Molmil
Crystal structure of a first-in-class antibody for alpha-1,6-fucosylated prostate-specific antigen
Descriptor: Heavy chain rabbit fab, Light chain rabbit fab
Authors:Halldorsson, S.
Deposit date:2024-04-18
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Development of a first-in-class antibody and a specific assay for alpha-1,6-fucosylated prostate-specific antigen.
Sci Rep, 14, 2024
9FTW
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BU of 9ftw by Molmil
Crystal structure of calcium-activated EndoU
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Fribourg, S, Campagne, S.
Deposit date:2024-06-25
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular Basis for the Calcium-Dependent Activation of the Ribonuclease EndoU.
Res Sq, 2024
9BEL
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BU of 9bel by Molmil
Tungstate binding protein (Tungbindin) from Eubacterium limosum with five Tungstates bound
Descriptor: Molybdenum-pterin binding domain-containing protein, SULFATE ION, TUNGSTATE(VI)ION
Authors:Zhou, D, Rose, J.P, Chen, L, Wang, B.C.
Deposit date:2024-04-15
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Tungstate binding protein (Tungbindin) from Eubacterium limosum with five Tungstates bound
To Be Published
9BCM
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BU of 9bcm by Molmil
Crystal structure of the glycosyltransferase UGT95A1
Descriptor: Glycosyltransferase
Authors:Pereira, J.H, Sirirungruang, S, Shih, P.M, Adams, P.D.
Deposit date:2024-04-09
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural and biochemical basis for regiospecificity of the flavonoid glycosyltransferase UGT95A1.
J.Biol.Chem., 300, 2024
9AZA
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BU of 9aza by Molmil
Crystal structure of LolTv4
Descriptor: Aminotransferase, class V/Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
Authors:Gao, J, Hai, Y.
Deposit date:2024-03-10
Release date:2024-07-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Enzymatic Synthesis of Unprotected alpha , beta-Diamino Acids via Direct Asymmetric Mannich Reactions.
J.Am.Chem.Soc., 146, 2024
9AZB
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BU of 9azb by Molmil
Crystal structure of LolTv5
Descriptor: Aminotransferase, class V/Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
Authors:Gao, J, Hai, Y.
Deposit date:2024-03-11
Release date:2024-07-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Enzymatic Synthesis of Unprotected alpha , beta-Diamino Acids via Direct Asymmetric Mannich Reactions.
J.Am.Chem.Soc., 146, 2024
9GP2
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BU of 9gp2 by Molmil
apoJ22.9 Unliganded structure of an Fab fragment from the therapeutic antibody J22.9-xi
Descriptor: Chains: H, Chains: L
Authors:Marino, S.F, Daumke, O.
Deposit date:2024-09-06
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:apoJ22.9 Unliganded structure of an Fab fragment from the therapeutic antibody J22.9-xi
To Be Published
9ETK
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BU of 9etk by Molmil
Crystal structure of Vibrio cholerae RNase AM
Descriptor: GLYCEROL, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2024-03-26
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of Vibrio cholerase RNase AM
To Be Published
9EM1
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BU of 9em1 by Molmil
Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone and phosphate
Descriptor: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, Chronophin, GLYCEROL, ...
Authors:Brenner, M, Gohla, A, Schindelin, H.
Deposit date:2024-03-07
Release date:2024-06-12
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase.
Elife, 13, 2024
9EUU
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BU of 9euu by Molmil
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Descriptor: Alpha-synuclein
Authors:Burger, D, Kashyrina, M, Lewis, A, De Nuccio, F, Mohammed, I, de La Seigliere, H, van den Heuvel, L, Feuillie, C, Verchere, J, Berbon, M, Arotcarena, M, Retailleau, A, Bezard, E, Laferriere, F, Loquet, A, Bousset, L, Baron, T, Lofrumento, D.D, De Giorgi, F, Stahlberg, H, Ichas, F.
Deposit date:2024-03-28
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (1.93 Å)
Cite:Multiple System Atrophy: Insights from aSyn Fibril Structure
To Be Published
9C6L
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BU of 9c6l by Molmil
Yasminevirus c12orf29, a 5' to 3' RNA ligase
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, RNA ligase1, ...
Authors:Hu, Y, Lopez, V.A, Tagliabracci, V.S, Tomchick, D.R.
Deposit date:2024-06-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and structural insights into a 5' to 3' RNA ligase reveal a potential role in tRNA ligation
To Be Published
8TJG
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BU of 8tjg by Molmil
Structure of Nei2 from Mycobacterium smegmatis in complex with Zn2+
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, ZINC ION
Authors:Warren, G, Shuman, S.
Deposit date:2023-07-21
Release date:2024-03-06
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and in vivo psoralen DNA crosslink repair activity of mycobacterial Nei2.
Mbio, 15, 2024
8TUA
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BU of 8tua by Molmil
Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
Descriptor: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Authors:Cash, J.N, Tesmer, J.J.G.
Deposit date:2023-08-15
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
Elife, 2024
7BBM
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BU of 7bbm by Molmil
Mutant nitrobindin M75L/H76L/Q96C/M148L (NB4H) from Arabidopsis thaliana with cofactor MnPPIX
Descriptor: 1,2-ETHANEDIOL, MANGANESE PROTOPORPHYRIN IX, UPF0678 fatty acid-binding protein-like protein At1g79260
Authors:Minges, A, Sauer, D.F, Wittwer, M, Markel, U, Spiertz, M, Schiffels, J, Davari, M.D, Okuda, J, Schwaneberg, U, Groth, G.
Deposit date:2020-12-18
Release date:2021-05-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Chemogenetic engineering of nitrobindin toward an artificial epoxygenase
Catalysis Science And Technology, 2021
2B0E
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BU of 2b0e by Molmil
EcoRV Restriction Endonuclease/GAAUTC/Ca2+
Descriptor: 5'-D(*AP*AP*AP*GP*AP*AP*(DU)P*TP*CP*TP*T)-3', CALCIUM ION, Type II restriction enzyme EcoRV
Authors:Hiller, D.A, Rodriguez, A.M, Perona, J.J.
Deposit date:2005-09-13
Release date:2005-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-cognate Enzyme-DNA Complex: Structural and Kinetic Analysis of EcoRV Endonuclease Bound to the EcoRI Recognition Site GAATTC
J.Mol.Biol., 354, 2005

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