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8QC6
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BU of 8qc6 by Molmil
Crystal Structure of NAD-dependent glycoside hydrolase from Arthrobacter sp. U41 in complex with NAD+ and sulfoquinovose (SQ)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Oxidoreductase, sulfoquinovose
Authors:Sharma, M, Davies, G.J.
Deposit date:2023-08-25
Release date:2023-12-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Widespread Family of NAD + -Dependent Sulfoquinovosidases at the Gateway to Sulfoquinovose Catabolism.
J.Am.Chem.Soc., 145, 2023
8QC2
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BU of 8qc2 by Molmil
Crystal structure of NAD-dependent glycoside hydrolase from Flavobacterium sp. (strain K172) in complex with co-factor NAD+ and sulfoquinovose (SQ)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Gfo/Idh/MocA family oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Pickles, I.B, Sharma, M, Davies, G.J.
Deposit date:2023-08-25
Release date:2023-12-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Widespread Family of NAD + -Dependent Sulfoquinovosidases at the Gateway to Sulfoquinovose Catabolism.
J.Am.Chem.Soc., 145, 2023
5TEB
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BU of 5teb by Molmil
Crystal Structure of the TIR domain from the Arabidopsis Thaliana disease resistance protein RPP1
Descriptor: Recognition of Peronospora parasitica 1
Authors:Bentham, A.R, Zhang, X, Croll, T, Williams, S, Kobe, B.
Deposit date:2016-09-20
Release date:2017-02-01
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Multiple functional self-association interfaces in plant TIR domains.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6RQK
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BU of 6rqk by Molmil
Crystal structure of GH125 1,6-alpha-mannosidase from Clostridium perfringens in complex with mannoimidazole
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, Alpha-1,6-mannosidase
Authors:Males, A, Davies, G.J.
Deposit date:2019-05-16
Release date:2019-08-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Distortion of mannoimidazole supports a B2,5boat transition state for the family GH125 alpha-1,6-mannosidase from Clostridium perfringens.
Org.Biomol.Chem., 17, 2019
6SMY
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BU of 6smy by Molmil
Crystal structure of SLA Reductase YihU from E. Coli with NADH and product DHPS
Descriptor: (2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid, 3-sulfolactaldehyde reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sharma, M, Davies, G.J.
Deposit date:2019-08-23
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Dynamic Structural Changes Accompany the Production of Dihydroxypropanesulfonate by Sulfolactaldehyde Reductase
Acs Catalysis, 2020
6MSS
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BU of 6mss by Molmil
Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to differing CD1d docking strategies
Descriptor: (2S)-2-(heptadecanoyloxy)-3-{[(10S)-10-methyloctadecanoyl]oxy}propyl alpha-D-glucopyranosiduronic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sundararaj, S, Le Nours, J, Praveena, T, Rossjohn, J.
Deposit date:2018-10-18
Release date:2019-10-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Distinct CD1d docking strategies exhibited by diverse Type II NKT cell receptors.
Nat Commun, 10, 2019
5NGL
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BU of 5ngl by Molmil
The endo-beta1,6-glucanase BT3312
Descriptor: 1-DEOXYNOJIRIMYCIN, Glucosylceramidase, SODIUM ION, ...
Authors:Basle, A, Temple, M, Cuskin, F, Lowe, E, Gilbert, H.
Deposit date:2017-03-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Bacteroidetes locus dedicated to fungal 1,6-beta-glucan degradation: Unique substrate conformation drives specificity of the key endo-1,6-beta-glucanase.
J. Biol. Chem., 292, 2017
5NE5
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BU of 5ne5 by Molmil
Crystal structure of family 47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with kifunensine
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, KIFUNENSINE, ...
Authors:Males, A, Davies, G.J.
Deposit date:2017-03-09
Release date:2017-03-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Conformational Analysis of the Mannosidase Inhibitor Kifunensine: A Quantum Mechanical and Structural Approach.
Chembiochem, 18, 2017
5NGK
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BU of 5ngk by Molmil
The endo-beta1,6-glucanase BT3312
Descriptor: Glucosylceramidase
Authors:Basle, A, Temple, M, Cuskin, F, Lowe, E, Gilbert, H.
Deposit date:2017-03-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Bacteroidetes locus dedicated to fungal 1,6-beta-glucan degradation: Unique substrate conformation drives specificity of the key endo-1,6-beta-glucanase.
J. Biol. Chem., 292, 2017
6SMZ
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BU of 6smz by Molmil
Crystal structure of SLA Reductase YihU from E. Coli in complex with NADH
Descriptor: 3-sulfolactaldehyde reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sharma, M, Davies, G.J.
Deposit date:2019-08-23
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Dynamic Structural Changes Accompany the Production of Dihydroxypropanesulfonate by Sulfolactaldehyde Reductase
Acs Catalysis, 2020
6SM7
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BU of 6sm7 by Molmil
Crystal structure of SLA Reductase YihU from E. Coli
Descriptor: 3-sulfolactaldehyde reductase, BORIC ACID
Authors:Sharma, M, Davies, G.J.
Deposit date:2019-08-21
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Dynamic Structural Changes Accompany the Production of Dihydroxypropanesulfonate by Sulfolactaldehyde Reductase
Acs Catalysis, 2020
6MRA
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BU of 6mra by Molmil
Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to differing CD1d docking strategies
Descriptor: TCR alpha chain, TCR beta-chain
Authors:Sundararaj, S, Le Nours, J, Praveena, T, Rossjohn, J.
Deposit date:2018-10-12
Release date:2019-09-18
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distinct CD1d docking strategies exhibited by diverse Type II NKT cell receptors.
Nat Commun, 10, 2019
8AH3
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BU of 8ah3 by Molmil
DG04279 glycoside hydrolase family 172
Descriptor: CALCIUM ION, DG02479 GH127
Authors:Al-Jourani, O, Lowe, E.C, Basle, A.
Deposit date:2022-07-20
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mining the human gut microbiome identifies mycobacterial D-arabinan degrading enzymes
To Be Published
8BC2
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BU of 8bc2 by Molmil
Ligand-Free Structure of the decameric sulfofructose transaldolase BmSF-TAL
Descriptor: Transaldolase
Authors:Snow, A.J.D, Sharma, M, Blaza, J, Davies, G.J.
Deposit date:2022-10-14
Release date:2023-01-18
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
Structure, 31, 2023
8BC4
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BU of 8bc4 by Molmil
Cryo-EM Structure of a BmSF-TAL - Sulfofructose Schiff Base Complex in symmetry group C1
Descriptor: (2~{R},3~{S},4~{S})-2,3,4,6-tetrakis(oxidanyl)hexane-1-sulfonic acid, Transaldolase
Authors:Snow, A.J.D, Sharma, M, Blaza, J, Davies, G.J.
Deposit date:2022-10-14
Release date:2023-01-18
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
Structure, 31, 2023
8BC3
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BU of 8bc3 by Molmil
Cryo-EM Structure of a BmSF-TAL - Sulfofructose Schiff Base Complex
Descriptor: (2~{R},3~{S},4~{S})-2,3,4,6-tetrakis(oxidanyl)hexane-1-sulfonic acid, BmSF-TAL
Authors:Snow, A.J.D, Sharma, M, Blaza, J, Davies, G.J.
Deposit date:2022-10-14
Release date:2023-01-18
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
Structure, 31, 2023
6EON
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BU of 6eon by Molmil
Galactanase BT0290
Descriptor: Beta-galactosidase, CALCIUM ION, alpha-D-galactopyranose
Authors:Basle, A, Munoz, J, Gilbert, H.
Deposit date:2017-10-10
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EUI
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BU of 6eui by Molmil
The GH43, Beta 1,3 Galactosidase, BT3683 with galactose
Descriptor: Beta-glucanase, CALCIUM ION, beta-D-galactopyranose
Authors:Cartmell, A, Gilbert, H.J.
Deposit date:2017-10-30
Release date:2018-10-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EUJ
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BU of 6euj by Molmil
The GH43, Beta 1,3 Galactosidase, BT0265
Descriptor: Beta-glucanase
Authors:Cartmell, A, Gilbert, H.J.
Deposit date:2017-10-30
Release date:2018-10-17
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EUF
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BU of 6euf by Molmil
The GH43, Beta 1,3 Galactosidase, BT0265
Descriptor: Beta-glucanase, alpha-L-arabinofuranose-(1-3)-[alpha-L-arabinofuranose-(1-4)][beta-D-glucopyranuronic acid-(1-6)]beta-D-galactopyranose-(1-6)-beta-D-galactopyranose, alpha-L-rhamnopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-6)-[alpha-L-arabinofuranose-(1-3)][alpha-L-arabinofuranose-(1-4)]beta-D-galactopyranose-(1-6)-beta-D-galactopyranose
Authors:Cartmell, A, Gilbert, H.J.
Deposit date:2017-10-30
Release date:2018-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EUH
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BU of 6euh by Molmil
The GH43, Beta 1,3 Galactosidase, BT3683 with galactodeoxynojirimycin
Descriptor: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol, Beta-glucanase, CALCIUM ION
Authors:Cartmell, A, Gilbert, H.J.
Deposit date:2017-10-30
Release date:2018-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EUG
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BU of 6eug by Molmil
The GH43, Beta 1,3 Galactosidase, BT3683 with galactoimidazole
Descriptor: Beta-glucanase, GLUCOIMIDAZOLE
Authors:Cartmell, A, Gilbert, H.J.
Deposit date:2017-10-30
Release date:2018-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Nat Microbiol, 3, 2018
6EX6
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BU of 6ex6 by Molmil
The GH127, Beta-arabinofuranosidase, BT3674
Descriptor: Six-hairpin glycosidase, ZINC ION
Authors:Munoz-Munoz, J, Gilbert, H.J.
Deposit date:2017-11-07
Release date:2018-11-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The cellular location of endo-acting galactanases confers keystone or recipient status to arabinogalactan degrading organisms of the human gut microbiota
To Be Published
2NCG
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BU of 2ncg by Molmil
The CC domain structure from the wheat stem rust resistance protein Sr33 challenges paradigms for dimerization in plant NLR proteins
Descriptor: RGA1e
Authors:Lavrencic, P, Mobli, M.
Deposit date:2016-03-30
Release date:2016-10-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The CC domain structure from the wheat stem rust resistance protein Sr33 challenges paradigms for dimerization in plant NLR proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
7NE2
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BU of 7ne2 by Molmil
Crystal structure of class I SFP aldolase YihT from Salmonella enterica with SFP/ DHAP (Schiff base complex with active site Lys193)
Descriptor: (2~{S},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)-6-phosphonooxy-hexane-1-sulfonic acid, Sulfofructosephosphate aldolase, [(~{E})-2,3-bis(oxidanyl)prop-1-enyl] dihydrogen phosphate
Authors:Sharma, M, Davies, G.J.
Deposit date:2021-02-03
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis.
Acs Cent.Sci., 7, 2021

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PDB entries from 2024-06-12

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