Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3E0C
DownloadVisualize
BU of 3e0c by Molmil
Crystal Structure of DNA Damage-Binding protein 1(DDB1)
Descriptor: DNA damage-binding protein 1
Authors:Amaya, M.F, Xu, L, Hao, H, Bountra, C, Wickstroem, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2008-07-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure and function of WD40 domain proteins.
Protein Cell, 2, 2011
7EJV
DownloadVisualize
BU of 7ejv by Molmil
The co-crystal structure of DYRK2 with YK-2-69
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 2, [6-[[4-[2-(dimethylamino)-1,3-benzothiazol-6-yl]-5-fluoranyl-pyrimidin-2-yl]amino]pyridin-3-yl]-(4-ethylpiperazin-1-yl)methanone
Authors:Li, Z, Xiao, Y, Yuan, K, Kuang, W, Xiuquan, Y, Yang, P.
Deposit date:2021-04-02
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Targeting dual-specificity tyrosine phosphorylation-regulated kinase 2 with a highly selective inhibitor for the treatment of prostate cancer.
Nat Commun, 13, 2022
7WNV
DownloadVisualize
BU of 7wnv by Molmil
Crystal structure of mutant estrogen receptor alpha Y537S in complex with CO9
Descriptor: (~{Z})-4-[2-[4-[[2-(4-hydroxyphenyl)-6-oxidanyl-1-benzothiophen-3-yl]oxy]phenoxy]ethylamino]-~{N},~{N}-dimethyl-but-2-enamide, Estrogen receptor
Authors:Xiao, Y, Lv, Y.
Deposit date:2022-01-19
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystallography study and optimization of novel benzothiophene analogs as potent selective estrogen receptor covalent antagonists (SERCAs) with improved potency and safety profiles.
Bioorg.Chem., 141, 2023
3EUO
DownloadVisualize
BU of 3euo by Molmil
crystal structure of a fungal type III polyketide synthase, ORAS
Descriptor: Type III Pentaketide Synthase
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008
3EUQ
DownloadVisualize
BU of 3euq by Molmil
X-ray structural of a type III pentaketide synthase from Neurospora crassa
Descriptor: HEXAETHYLENE GLYCOL, Putative uncharacterized protein
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008
3EUT
DownloadVisualize
BU of 3eut by Molmil
X-ray crystal structure of a type III pentaketide synthase from Neurospora crassa
Descriptor: Putative uncharacterized protein, icosanoic acid
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008
3NLA
DownloadVisualize
BU of 3nla by Molmil
NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, 40 STRUCTURES
Descriptor: ANTIFREEZE PROTEIN RD3 TYPE III
Authors:Miura, K, Ohgiya, S, Hoshino, T, Nemoto, N, Hikichi, K, Tsuda, S.
Deposit date:1998-02-24
Release date:1999-02-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis for the binding of a globular antifreeze protein to ice.
Nature, 384, 1996
8WFX
DownloadVisualize
BU of 8wfx by Molmil
Cryo-EM structure of CRISPR-Csm effector complex from Mycobacterium canettii
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Huo, Y, Ma, X, Jiang, T.
Deposit date:2023-09-20
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Type-III-A structure of mycobacteria CRISPR-Csm complexes involving atypical crRNAs.
Int.J.Biol.Macromol., 260, 2024
7XCZ
DownloadVisualize
BU of 7xcz by Molmil
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7054 and BA7125 fab (local refinement)
Descriptor: BA7054 fab, BA7125 fab, Spike glycoprotein
Authors:Liu, Z, Liu, S.
Deposit date:2022-03-26
Release date:2023-03-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
7XDA
DownloadVisualize
BU of 7xda by Molmil
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7208 and BA7125 fab (local refinement)
Descriptor: BA7125 fab, BA7208 fab, Spike glycoprotein
Authors:Liu, Z, Liu, S, Liu, S.
Deposit date:2022-03-26
Release date:2023-03-01
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
7XDK
DownloadVisualize
BU of 7xdk by Molmil
Cryo-EM structure of SARS-CoV-2 Delta Spike protein in complex with BA7054 and BA7125 fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BA7054 fab, ...
Authors:Liu, Z, Lui, S, Gao, Y.
Deposit date:2022-03-27
Release date:2023-03-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
7XDB
DownloadVisualize
BU of 7xdb by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Spike protein in complex with BA7208 fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BA7208 fab, ...
Authors:Liu, Z, Liu, S, Gao, Y.Z.
Deposit date:2022-03-26
Release date:2023-03-01
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
7XDL
DownloadVisualize
BU of 7xdl by Molmil
Cryo-EM structure of SARS-CoV-2 Delta Spike protein in complex with BA7208 and BA7125 fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BA7125 fab, ...
Authors:Liu, Z, Liu, S, Yuanzhu, G.
Deposit date:2022-03-27
Release date:2023-03-15
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
8XK5
DownloadVisualize
BU of 8xk5 by Molmil
SNB1G11 Fab bound to SFTSV glycoprotein Gn
Descriptor: Envelopment polyprotein, mAb SNB1G11 Fab heavy chain, mAb SNB1G11 Fab light chain
Authors:Deng, Z.
Deposit date:2023-12-22
Release date:2024-07-10
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A broadly protective antibody targeting glycoprotein Gn inhibits severe fever with thrombocytopenia syndrome virus infection.
Nat Commun, 15, 2024
8XK6
DownloadVisualize
BU of 8xk6 by Molmil
S2A5 Fab bound to SFTSV glycoprotein Gn
Descriptor: Envelopment polyprotein, mAb S2A5 Fab heavy chain, mAb S2A5 Fab light chain
Authors:Deng, Z.
Deposit date:2023-12-22
Release date:2024-07-10
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A broadly protective antibody targeting glycoprotein Gn inhibits severe fever with thrombocytopenia syndrome virus infection.
Nat Commun, 15, 2024
8Z4L
DownloadVisualize
BU of 8z4l by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at substrate-engaged state I
Descriptor: RNA (40-MER), RNA (49-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-17
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z9E
DownloadVisualize
BU of 8z9e by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state II
Descriptor: Protein structure, RNA (34-MER), RNA (39-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-23
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z9C
DownloadVisualize
BU of 8z9c by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state I
Descriptor: Protein structure, RNA (41-MER), RNA (48-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-23
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z99
DownloadVisualize
BU of 8z99 by Molmil
Cryo-EM structure of NTR-bound type VII CRISPR-Cas complex at substrate-engaged state +I
Descriptor: RNA (49-MER), RNA (54-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-22
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8YHE
DownloadVisualize
BU of 8yhe by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at post-state II
Descriptor: RNA (29-MER), RNA (46-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-02-28
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8YHD
DownloadVisualize
BU of 8yhd by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at post-state I
Descriptor: RNA (35-MER), RNA (53-MER), ZINC ION, ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-02-28
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
8Z4J
DownloadVisualize
BU of 8z4j by Molmil
Cryo-EM structure of CTR-bound type VII CRISPR-Cas complex at substrate-engaged state II
Descriptor: Protein structure, RNA (34-MER), RNA (38-MER), ...
Authors:Zhang, H, Deng, Z, Li, X.
Deposit date:2024-04-17
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural basis for the activity of the type VII CRISPR-Cas system.
Nature, 2024
4YFF
DownloadVisualize
BU of 4yff by Molmil
TNNI3K complexed with inhibitor 2
Descriptor: 3-[(5-bromo-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-N-methyl-4-(morpholin-4-yl)benzenesulfonamide, Serine/threonine-protein kinase TNNI3K
Authors:Shewchuk, L.M, Wang, L, Lawhorn, B.G.
Deposit date:2015-02-25
Release date:2015-09-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Identification of Purines and 7-Deazapurines as Potent and Selective Type I Inhibitors of Troponin I-Interacting Kinase (TNNI3K).
J.Med.Chem., 58, 2015
4YFI
DownloadVisualize
BU of 4yfi by Molmil
TNNI3K complexed with inhibitor 1
Descriptor: N-methyl-3-(9H-purin-6-ylamino)benzenesulfonamide, Serine/threonine-protein kinase TNNI3K
Authors:Shewchuk, L.M, Wang, L, Lawhorn, B.G.
Deposit date:2015-02-25
Release date:2015-09-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification of Purines and 7-Deazapurines as Potent and Selective Type I Inhibitors of Troponin I-Interacting Kinase (TNNI3K).
J.Med.Chem., 58, 2015
8TNL
DownloadVisualize
BU of 8tnl by Molmil
CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, H7.HK1 Neutralizing Antibody Heavy Chain, Hemagglutinin
Authors:Morano, N.C, Wu, X, Shapiro, L.
Deposit date:2023-08-02
Release date:2024-05-15
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Human neutralizing antibodies target a conserved lateral patch on H7N9 hemagglutinin head.
Nat Commun, 15, 2024

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon