Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ZYP
DownloadVisualize
BU of 1zyp by Molmil
Synchrotron reduced form of the N-terminal domain of Salmonella typhimurium AhpF
Descriptor: Alkyl hydroperoxide reductase subunit F
Authors:Roberts, B.R, Wood, Z.A, Jonsson, T.J, Poole, L.B, Karplus, P.A.
Deposit date:2005-06-10
Release date:2005-06-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
Protein Sci., 14, 2005
4L0U
DownloadVisualize
BU of 4l0u by Molmil
Crystal structure of Plasmodium vivax Prx1a
Descriptor: 2-Cys peroxiredoxin, putative, ACETATE ION
Authors:Gretes, M.C, Karplus, P.A.
Deposit date:2013-06-01
Release date:2016-11-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Observed octameric assembly of a Plasmodium yoelii peroxiredoxin can be explained by the replacement of native "ball-and-socket" interacting residues by an affinity tag.
Protein Sci., 22, 2013
4JTN
DownloadVisualize
BU of 4jtn by Molmil
Cysteine Dioxygenase at pH 8.0 in the presence of dithionite
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4JTO
DownloadVisualize
BU of 4jto by Molmil
Cysteine bound Cysteine Dioxygenase at pH 8.0 in the presence of Cys and dithionite
Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2013-03-23
Release date:2013-06-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
2B5H
DownloadVisualize
BU of 2b5h by Molmil
1.5 A Resolution Crystal Structure of Recombinant R. Norvegicus Cysteine Dioxygenase
Descriptor: Cysteine dioxygenase type I, FE (III) ION
Authors:Simmons, C.R, Liu, Q, Huang, Q, Hao, Q, Begley, T.P, Karplus, P.A, Stipanuk, M.H.
Deposit date:2005-09-28
Release date:2006-04-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Mammalian Cysteine Dioxygenase: A NOVEL MONONUCLEAR IRON CENTER FOR CYSTEINE THIOL OXIDATION.
J.Biol.Chem., 281, 2006
4L0W
DownloadVisualize
BU of 4l0w by Molmil
Plasmodium yoelii Prx1a modified at the N-terminus forms an artifactual octamer
Descriptor: ACETATE ION, SULFATE ION, Thioredoxin peroxidase 1
Authors:Gretes, M.C, Karplus, P.A.
Deposit date:2013-06-01
Release date:2016-11-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Observed octameric assembly of a Plasmodium yoelii peroxiredoxin can be explained by the replacement of native "ball-and-socket" interacting residues by an affinity tag.
Protein Sci., 22, 2013
1FNB
DownloadVisualize
BU of 1fnb by Molmil
REFINED CRYSTAL STRUCTURE OF SPINACH FERREDOXIN REDUCTASE AT 1.7 ANGSTROMS RESOLUTION: OXIDIZED, REDUCED, AND 2'-PHOSPHO-5'-AMP BOUND STATES
Descriptor: FERREDOXIN-NADP+ REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, ...
Authors:Bruns, C.M, Karplus, P.A.
Deposit date:1995-01-05
Release date:1995-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined crystal structure of spinach ferredoxin reductase at 1.7 A resolution: oxidized, reduced and 2'-phospho-5'-AMP bound states.
J.Mol.Biol., 247, 1995
1FNC
DownloadVisualize
BU of 1fnc by Molmil
REFINED CRYSTAL STRUCTURE OF SPINACH FERREDOXIN REDUCTASE AT 1.7 ANGSTROMS RESOLUTION: OXIDIZED, REDUCED, AND 2'-PHOSPHO-5'-AMP BOUND STATES
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, FERREDOXIN-NADP+ REDUCTASE, ...
Authors:Bruns, C.M, Karplus, P.A.
Deposit date:1995-01-05
Release date:1995-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined crystal structure of spinach ferredoxin reductase at 1.7 A resolution: oxidized, reduced and 2'-phospho-5'-AMP bound states.
J.Mol.Biol., 247, 1995
1FND
DownloadVisualize
BU of 1fnd by Molmil
REFINED CRYSTAL STRUCTURE OF SPINACH FERREDOXIN REDUCTASE AT 1.7 ANGSTROMS RESOLUTION: OXIDIZED, REDUCED, AND 2'-PHOSPHO-5'-AMP BOUND STATES
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, FERREDOXIN-NADP+ REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Bruns, C.M, Karplus, P.A.
Deposit date:1995-01-05
Release date:1995-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined crystal structure of spinach ferredoxin reductase at 1.7 A resolution: oxidized, reduced and 2'-phospho-5'-AMP bound states.
J.Mol.Biol., 247, 1995
1EJX
DownloadVisualize
BU of 1ejx by Molmil
CRYSTAL STRUCTURE OF WILD-TYPE KLEBSIELLA AEROGENES UREASE AT 100K
Descriptor: NICKEL (II) ION, UREASE ALPHA SUBUNIT, UREASE BETA SUBUNIT, ...
Authors:Pearson, M.A, Karplus, P.A.
Deposit date:2000-03-04
Release date:2003-07-08
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Wild-type Klebsiella aerogenes Urease at 100K
To be published
1N8J
DownloadVisualize
BU of 1n8j by Molmil
Crystal Structure of AhpC with Active Site Cysteine mutated to Serine (C46S)
Descriptor: Alkyl hydroperoxide reductase C22 protein
Authors:Wood, Z.A, Poole, L.B, Karplus, P.A.
Deposit date:2002-11-20
Release date:2003-04-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Peroxiredoxin Evolution and the Regulation of Hydrogen Peroxide Signaling
Science, 300, 2003
1NI2
DownloadVisualize
BU of 1ni2 by Molmil
Structure of the active FERM domain of Ezrin
Descriptor: Ezrin
Authors:Smith, W.J, Nassar, N, Bretscher, A.P, Cerione, R.A, Karplus, P.A.
Deposit date:2002-12-20
Release date:2003-02-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Active N-terminal Domain of Ezrin. CONFORMATIONAL AND MOBILITY CHANGES IDENTIFY KEYSTONE INTERACTIONS.
J.Biol.Chem., 278, 2003
1OYC
DownloadVisualize
BU of 1oyc by Molmil
OLD YELLOW ENZYME AT 2 ANGSTROMS RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING AND COMPARISON WITH RELATED FLAVOPROTEINS
Descriptor: FLAVIN MONONUCLEOTIDE, OLD YELLOW ENZYME
Authors:Fox, K.M, Karplus, P.A.
Deposit date:1994-08-25
Release date:1994-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Old yellow enzyme at 2 A resolution: overall structure, ligand binding, and comparison with related flavoproteins.
Structure, 2, 1994
1OYA
DownloadVisualize
BU of 1oya by Molmil
OLD YELLOW ENZYME AT 2 ANGSTROMS RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING AND COMPARISON WITH RELATED FLAVOPROTEINS
Descriptor: FLAVIN MONONUCLEOTIDE, OLD YELLOW ENZYME
Authors:Fox, K.M, Karplus, P.A.
Deposit date:1994-08-25
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Old yellow enzyme at 2 A resolution: overall structure, ligand binding, and comparison with related flavoproteins.
Structure, 2, 1994
1OYB
DownloadVisualize
BU of 1oyb by Molmil
OLD YELLOW ENZYME AT 2 ANGSTROMS RESOLUTION: OVERALL STRUCTURE, LIGAND BINDING AND COMPARISON WITH RELATED FLAVOPROTEINS
Descriptor: FLAVIN MONONUCLEOTIDE, OLD YELLOW ENZYME, P-HYDROXYBENZALDEHYDE
Authors:Fox, K.M, Karplus, P.A.
Deposit date:1994-08-25
Release date:1994-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Old yellow enzyme at 2 A resolution: overall structure, ligand binding, and comparison with related flavoproteins.
Structure, 2, 1994
1ONF
DownloadVisualize
BU of 1onf by Molmil
Crystal structure of Plasmodium falciparum Glutathione reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Glutathione reductase
Authors:Sarma, G.N, Savvides, S.N, Becker, K, Schirmer, M, Schirmer, R.H, Karplus, P.A.
Deposit date:2003-02-27
Release date:2003-05-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glutathione reductase of the malarial parasite Plasmodium falciparum: Crystal structure and inhibitor development
J.Mol.Biol., 328, 2003
1A5Q
DownloadVisualize
BU of 1a5q by Molmil
P93A VARIANT OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: RIBONUCLEASE A, SULFATE ION
Authors:Pearson, M.A, Karplus, P.A, Dodge, R.W, Laity, J.H, Scheraga, H.A.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of two mutants that have implications for the folding of bovine pancreatic ribonuclease A.
Protein Sci., 7, 1998
1A5P
DownloadVisualize
BU of 1a5p by Molmil
C[40,95]A VARIANT OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: RIBONUCLEASE A, SULFATE ION
Authors:Pearson, M.A, Karplus, P.A, Dodge, R.W, Laity, J.H, Scheraga, H.A.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of two mutants that have implications for the folding of bovine pancreatic ribonuclease A.
Protein Sci., 7, 1998
1BX0
DownloadVisualize
BU of 1bx0 by Molmil
Ferredoxin:nadp+ oxidoreductase (ferredoxin reductase) mutant e312l
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, PROTEIN (FERREDOXIN:NADP+ OXIDOREDUCTASE), ...
Authors:Aliverti, A, Deng, Z, Ravasi, D, Piubelli, L, Karplus, P.A, Zanetti, G.
Deposit date:1998-10-10
Release date:1998-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the function of the invariant glutamyl residue 312 in spinach ferredoxin-NADP+ reductase.
J.Biol.Chem., 273, 1998
1BX1
DownloadVisualize
BU of 1bx1 by Molmil
FERREDOXIN:NADP+ OXIDOREDUCTASE (FERREDOXIN REDUCTASE) MUTANT E312Q
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, PROTEIN (FERREDOXIN:NADP+ OXIDOREDUCTASE), ...
Authors:Aliverti, A, Deng, Z, Ravasi, D, Piubelli, L, Karplus, P.A, Zanetti, G.
Deposit date:1998-10-10
Release date:1998-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the function of the invariant glutamyl residue 312 in spinach ferredoxin-NADP+ reductase.
J.Biol.Chem., 273, 1998
1GSN
DownloadVisualize
BU of 1gsn by Molmil
HUMAN GLUTATHIONE REDUCTASE MODIFIED BY DINITROSOGLUTATHIONE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, GLUTATHIONE REDUCTASE, ...
Authors:Becker, K, Savvides, S.N, Keese, M, Schirmer, R.H, Karplus, P.A.
Deposit date:1998-02-21
Release date:1998-05-27
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Enzyme inactivation through sulfhydryl oxidation by physiologic NO-carriers.
Nat.Struct.Biol., 5, 1998
1K03
DownloadVisualize
BU of 1k03 by Molmil
Crystal Structure of Old Yellow Enzyme Mutant Gln114Asn Complexed with Para-hydroxy Benzaldehyde
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH DEHYDROGENASE 1, ...
Authors:Brown, B.J, Hyun, J, Duvvuri, S.D, Karplus, P.A, Massey, V.
Deposit date:2001-09-18
Release date:2001-09-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of glutamine 114 in old yellow enzyme
J.Biol.Chem., 277, 2002
1HYU
DownloadVisualize
BU of 1hyu by Molmil
CRYSTAL STRUCTURE OF INTACT AHPF
Descriptor: ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Wood, Z.A, Poole, L.B, Karplus, P.A.
Deposit date:2001-01-22
Release date:2001-02-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of intact AhpF reveals a mirrored thioredoxin-like active site and implies large domain rotations during catalysis.
Biochemistry, 40, 2001
1JS4
DownloadVisualize
BU of 1js4 by Molmil
ENDO/EXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
Descriptor: CALCIUM ION, ENDO/EXOCELLULASE E4, beta-D-glucopyranose, ...
Authors:Sakon, J, Wilson, D.B, Karplus, P.A.
Deposit date:1997-05-30
Release date:1997-09-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.
Nat.Struct.Biol., 4, 1997
1K02
DownloadVisualize
BU of 1k02 by Molmil
Crystal Structure of Old Yellow Enzyme Mutant Gln114Asn
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH DEHYDROGENASE 1
Authors:Brown, B.J, Hyun, J, Duvvuri, S.D, Karplus, P.A, Massey, V.
Deposit date:2001-09-18
Release date:2001-09-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of glutamine 114 in old yellow enzyme
J.Biol.Chem., 277, 2002

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon