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5JFP
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BU of 5jfp by Molmil
HIV-1 wild Type protease with GRL-097-13A (a Adamantane P1-Ligand with bis-THF in P2 and isobutylamine in P1')
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5JFU
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BU of 5jfu by Molmil
HIV-1 wild Type protease with GRL-007-14A (a Adamantane P1-Ligand with bis-THF in P2 and benzylamine in P1')
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-4-{benzyl[(4-methoxyphenyl)sulfonyl]amino}-3-hydroxy-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5JG1
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BU of 5jg1 by Molmil
HIV-1 wild Type protease with GRL-031-14A (a Adamantane P1-Ligand with tetrahydropyrano-tetrahydrofuran in P2 and isobutylamine in P1')
Descriptor: (3R,3aS,7aR)-hexahydro-4H-furo[2,3-b]pyran-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, GLYCEROL, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
8XO3
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BU of 8xo3 by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-47) (P321 space group)
Descriptor: CALCIUM ION, Fusion glycoprotein F1
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.104 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO2
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BU of 8xo2 by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (P21212 space group)
Descriptor: Fusion glycoprotein F1, MAGNESIUM ION
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.306 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO7
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BU of 8xo7 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P2 space group)
Descriptor: Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GE
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (2.165 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XNE
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BU of 8xne by Molmil
Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (H32 space group)
Descriptor: Fusion glycoprotein F1, MAGNESIUM ION
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-29
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.155 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO5
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BU of 8xo5 by Molmil
Crystal structure of measles virus fusion inhibitor MEK28 complexed with F protein HR1 (HR1-40) (H3 space group)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Fusion glycoprotein F1, Measles virus fusion inhibitor MEK28
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.205 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO4
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BU of 8xo4 by Molmil
Crystal structure of measles virus fusion inhibitor M1EK complexed with F protein HR1 (HR1-42) (P21 space group)
Descriptor: Fusion glycoprotein F1, Measles virus fusion inhibitor M1EK
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (2.362 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO6
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BU of 8xo6 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P21212 space group)
Descriptor: ACETATE ION, Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GE, ...
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.457 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
8XO8
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BU of 8xo8 by Molmil
Crystal structure of measles virus fusion inhibitor MEK35GT complexed with F protein HR1 (HR1-42) (P21 space group)
Descriptor: Fusion glycoprotein F1, Measles virus fusion inhibitor MEK35GT
Authors:Oishi, S, Takahara, A, Nakatsu, T.
Deposit date:2023-12-31
Release date:2025-01-01
Last modified:2025-03-05
Method:X-RAY DIFFRACTION (1.846 Å)
Cite:Elucidation of Postfusion Structures of the Measles Virus F Protein for the Structure-Based Design of Fusion Inhibitors.
J.Med.Chem., 68, 2025
5BS4
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BU of 5bs4 by Molmil
HIV-1 wild Type protease with GRL-047-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, 4-amino sulfonamide derivative)
Descriptor: (3R,3aS,4R,6aR)-4-(methylamino)hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2015-06-01
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies.
J.Med.Chem., 58, 2015
5BRY
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BU of 5bry by Molmil
HIV-1 wild Type protease with GRL-011-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, sulfonamide isostere derivate)
Descriptor: (3R,3aS,4R,6aR)-4-(methylamino)hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2015-06-01
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies.
J.Med.Chem., 58, 2015
1KA9
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BU of 1ka9 by Molmil
Imidazole Glycerol Phosphate Synthase
Descriptor: imidazole glycerol phosphate synthase
Authors:Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-01
Release date:2002-12-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1KZK
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BU of 1kzk by Molmil
JE-2147-HIV Protease Complex
Descriptor: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
Deposit date:2002-02-06
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure
Biochemistry, 41, 2002
1IYE
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BU of 1iye by Molmil
CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
Descriptor: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:Hirotsu, K, Goto, M.
Deposit date:2002-08-07
Release date:2003-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme.
Biochemistry, 42, 2003
1IYD
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BU of 1iyd by Molmil
CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE
Descriptor: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, GLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Hirotsu, K, Goto, M.
Deposit date:2002-08-07
Release date:2003-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of branched-chain amino Acid aminotransferase complexed with glutamate and glutarate: true reaction intermediate and double substrate recognition of the enzyme.
Biochemistry, 42, 2003
5Z5E
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BU of 5z5e by Molmil
Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
Descriptor: GLYCEROL, NEQ417, SULFATE ION
Authors:Noguchi, H, Park, S.Y, Tamura, K.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation.
Biochem.Biophys.Res.Commun., 511, 2019
3A9Z
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BU of 3a9z by Molmil
Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A2B
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BU of 3a2b by Molmil
Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
Authors:Okamoto, A, Hoseki, J.
Deposit date:2009-05-09
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum
J.Biochem., 146, 2009
3A9Y
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BU of 3a9y by Molmil
Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
2Z5E
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BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
Descriptor: Proteasome Assembling Chaperone 3
Authors:Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
Deposit date:2007-07-06
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
3A9X
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BU of 3a9x by Molmil
Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
7DJI
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BU of 7dji by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
Authors:Ihara, M, Matsuda, K.
Deposit date:2020-11-20
Release date:2021-11-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors.
Mol.Pharmacol., 2023
7F8K
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BU of 7f8k by Molmil
Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2021-07-02
Release date:2021-09-08
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallogr.,Sect.F, 77, 2021

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